Trachemys scripta elegans (red-eared slider): 117882678
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Entry
117882678 CDS
T07347
Name
(RefSeq) cat eye syndrome critical region protein 2
KO
K25830
cat eye syndrome critical region protein 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117882678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117882678
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Chromatin remodeling factors
CERF complex
117882678
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
KIAA2026_hel
WSD
DDT
PRTRC_E
WHIM1
Motif
Other DBs
NCBI-GeneID:
117882678
NCBI-ProteinID:
XP_034637191
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All DBs
Position
1:109120233..109248293
Genome browser
AA seq
1465 aa
AA seq
DB search
MCPEEDGGCSVVGTGGPEGLGELRSWWEVPAIAHFCSLFRTAFRLPDFEIEELEAALHRD
DVEFISDLIACLLQGCYQRRDITSQTFHSYLEDIINYRWELEEGKPNPLRESTFQELPLR
TRVEILHRLCDYRLDADDVFDLLKGLDADSLRVEPLGEDSNGALYWYFYGTRMYKEEPVQ
GKSNGELASDRGSGGQTNTSNVPGKTGKRRGRPPKRKKLLEENLLREKAEENSLVHETQM
KNGSQGPGRGTWWLLCQTEEEWRQVTESFRERTSLRERQLYKLLSEDFLPEICNMIAQKE
KRLQHTEFSPRWMSDRQPIKPIQQEATPSVLSRMEKQRRREEEEERQILLAVQKKEQEQL
LKEERKREMEEKVKAVEERARRRKLREERAWLLAQGKELPPELSHLDPSSPAREERKTKD
LFELDDEFTAMYKVLDVVKAHKDSWPFLEPVDESYAPNYYQIIKAPMDISSMEKKLNGGQ
YCTKEEFVGDMKTMFRNCLKYNGEGSEYTKMAYNLERCFHRAMMKHFPGEDGDTDEEFWI
RVDGKREKRSRRTGRSSTGNVWTRSRDPEGSGRRQQHLENGGKPPPFRATPRAPVSSSSS
SSAEEPSGSTMQPPREVGASNGQGFPRPLHYGGMPSQVPHPGQMRPAVPGTFGPLRGSDP
AKLYGSPRVPEPHPGDPVQQHQHFAMQSTVGLNEHRGHRLAAPEKQVCAGPTHVSALGPR
PGSLQFGRMSGPPPDASMYPPVQFQQGFIPPRHNGPPMRPPESSEVPPGHMYRPYKYLNR
AHPAAWNGSHSATNQTSLGPDEKPPLSTGPSLQSRALSHMMDPRAIRPPLAPSQWTEQSN
FLPHGVPASGYIRPPGKTTGQRMQQPPASVFGGPPQVQRGCQGGDSMMDSPEMIAIQQLS
SRVCPPGVPYHPRQPPPPHLPGPFPQLAHVASANVQPPKPVLGNGNSQDASQTVEPESNR
VEPPPGVEEKAQCISVPEGTYPKLLPHSNPPLQMDCTRRSLPREREGDDSGTKNDPKAMQ
SKSAWPAQSTYAGPPGQACVRDLVTASERGPGPENGAVGEGPSSGNEGKGLAVNILEKPL
CPGGKTLSEVAVPCMGQSTSTPGVDGGSVGGAPSQFPPLYMPGLEYPNSATRYHINPGLQ
GFSPMMGGKPPSVSHPQHFPTQGFQHNNTHPGVFPRYRPHQGVPYPYQPQPPPSYHHYQR
PPYYTCPQGYSDWQRPLHPQANPGGHPPAHPPLARPSFSDRGNVGSLQGCEAFSTALASP
NRMDVASAKEVPPGDGQDPGPEDEKSDESQERPESPKEFLDLDNHNAATKRQSSVAAGEF
LYGALPPPLSSGIGFGPSAFPPHGVMLQTGSPYASRHPASHFQHRTYGSPVNAHLSRHPA
TSQANGLTQEGPLYRCREENMGHFQALLMEQRGSGGGMGAAQDMYRPPGMQIHQTQAPFP
KVPTATTSREELPPQKPSALPLDQS
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccggaggaggacggaggctgcagcgtggtggggaccggggggccggaggggctg
ggcgagctccgctcctggtgggaagtcccggccatcgctcacttctgctccctcttccgc
accgctttccgtctgcccgacttcgagatagaggaactggaagctgctcttcacagggat
gatgtggagtttatcagtgacctgattgcctgcctccttcagggttgctatcagcgcaga
gacatcacgtcacagacgtttcacagctaccttgaggacattatcaactaccgctgggag
ctggaggaagggaaacccaaccccctacgggaatccactttccaggagctgccgctgcgc
acccgcgtggagatcctgcaccgcctctgcgattaccggcttgatgcagatgacgtcttc
gacctcctcaagggtttggatgcagacagcctccgtgtagaaccactgggtgaggatagt
aatggcgccctctattggtatttctatggcactcgtatgtacaaagaagagccagtccag
gggaaatcaaatggagagctggcttcagacaggggaagtgggggccagacaaacacctca
aatgttcctgggaaaacaggcaagagacgagggcgacccccaaaacggaagaaactgctg
gaggagaatctgttgcgggagaaggctgaagagaactcgcttgtgcatgagacgcagatg
aaaaatgggtcccagggaccaggccgtgggacgtggtggctgctgtgtcagacggaagag
gagtggagacaagtcacagagagcttcagagagagaacctccctaagagaacggcagctc
tacaaactcctgagtgaagacttcctgcctgagatttgcaacatgattgcccagaaggag
aagcgtctgcagcacacggagttttcgcccaggtggatgtctgaccgtcagcccattaaa
ccaatccagcaggaggcgactccaagtgtgctcagcaggatggagaagcaaaggcgcagg
gaggaagaggaggagcgccaaatccttctggcagtgcagaagaaggagcaggaacagctg
ctaaaggaggagaggaagagggagatggaggagaaggtcaaagcagtggaagaacgagcc
aggaggaggaagctccgggaagaacgggcttggcttctggcccaggggaaggagcttccc
ccagaactttcccacttggatcccagttctcctgccagggaggaaaggaagaccaaggat
ctctttgaactggatgatgagttcaccgccatgtacaaagttctagatgtggtaaaggct
cacaaggactcttggcccttcttggaaccagttgatgaatcatatgctccaaattactac
cagatcattaaggctcccatggacatttctagcatggagaagaagctgaatggaggtcag
tactgcaccaaggaggagtttgtgggtgacatgaagaccatgttcaggaactgcctaaaa
tacaatggtgaaggcagcgaatacaccaagatggcatacaacttggagagatgcttccac
cgggcaatgatgaagcacttccctggggaagatggggacacggatgaggagttctggatc
agagtggatgggaaacgggagaagaggagccgtcggaccgggcgctccagcactggcaat
gtttggacccgatctagagaccctgagggatcaggcaggagacagcaacacctggagaat
ggagggaaaccaccaccattccgggctactccccgggctcctgtttcctcctcatcttcc
tcctctgcagaggaaccaagtggcagcacaatgcaaccccctcgggaggtgggcgcttcc
aacggccaaggcttccctcgcccactgcattatggtggaatgcccagccaggtgccacat
cctggccagatgcggccagcagtgccaggaacatttggccctctgcggggatcagatcca
gctaaactgtatggatcaccgcgagtaccagaaccccaccctggagatccagttcagcag
caccagcactttgccatgcagtctaccgtcggactgaatgaacacagaggacacagactg
gctgcaccagagaagcaggtgtgtgcagggccaacacatgtctctgcactggggccacgg
cctggatccctgcagtttgggcggatgagtggccctcccccagatgccagtatgtacccc
ccagtgcagttccagcaaggatttattcctccaaggcacaatggacctccaatgagacca
cctgagagctcagaggtccccccaggccatatgtatagaccatataaatatctaaatcga
gcgcatcctgctgcatggaatggaagccacagtgcaacaaaccagacctccctggggcca
gacgagaagcccccgttgagcacaggaccttctttgcagtctcgtgctcttagtcacatg
atggaccctcgggcaataagaccacctctggctcccagccagtggactgagcaatcaaat
ttcctacctcatggggtccctgcctcaggatacatcagaccacctggtaaaaccaccggt
cagagaatgcagcagcctccagcctctgtgtttgggggaccccctcaagttcagagagga
tgccaaggtggggattccatgatggacagtccagaaatgatcgccatccagcagctgtca
tctcgcgtgtgcccaccgggtgtgccttaccacccccgtcagcctcctcccccgcatctg
cctggccccttcccacagctggcccatgtcgcatcagcaaatgtgcagcctccgaaaccg
gtcttgggtaacggaaactctcaggatgccagtcagacagtggagccagaaagcaaccga
gtggagcccccacctggagtagaagagaaggctcagtgcatcagtgttccagaagggacg
taccccaaactgctacctcattccaacccccccttacagatggactgcaccagacggagc
ttgccgcgggagcgggagggagatgactctggaactaaaaatgacccgaaggcaatgcag
agcaagagtgcctggccggcacagagcacctacgctggcccgccaggccaggcgtgcgtg
agagaccttgtgacagcatctgagagagggcctgggcctgaaaatggggctgtaggtgaa
ggaccctccagtggcaatgaggggaaaggactggctgttaacatcttggagaagcccctt
tgtcctggggggaagactttgtcagaggtcgctgtgccttgtatgggacagagcaccagt
actcctggtgtggatggaggctcagtcgggggggctccaagccagtttccccctctctac
atgcctggtttggagtatccaaattcggccacacgttaccatatcaatccaggactgcag
gggttcagccctatgatgggagggaagcctccctctgtgtcccatccacagcatttcccc
actcagggctttcagcataataacacccatcccggtgtctttcctcggtatcgcccccat
cagggggtgccatatccctatcagccacaacctccaccgtcctaccaccactaccagcga
cctccatactacacttgtccacaaggctactcagactggcaaaggcctctccacccccag
gccaaccctggtgggcatccgcccgcccacccacctctggccaggccttctttctcagac
agggggaatgtgggtagtctgcagggctgcgaggcattcagcactgccctggcgtcccca
aaccgaatggacgtggcaagcgccaaagaggttcctccaggcgatgggcaggatccaggg
cctgaagatgagaagtcagacgaatcccaggagaggccagagagtcccaaagagtttctt
gatttggacaaccataatgcagccaccaagaggcagagctcggtggcagcaggggagttt
ctatatggggctctccccccgcctctgagttctgggatcggatttggtccatcagctttc
cctccccatggggtgatgctgcagacagggtctccttatgcatctcggcatccagccagt
catttccagcacaggacctatggatcaccagtgaacgctcacctgtctcgtcatccagcc
acgagccaagccaatggcctcactcaggagggacccctgtaccgctgccgggaagagaac
atgggtcactttcaggccctactgatggagcagagaggcagcggaggtggcatgggggcg
gcccaggacatgtacagaccaccgggaatgcaaatacaccagacccaagcacccttccca
aaggtgcctacagcaaccacatcccgggaggagctgccaccacaaaaaccatcagcattg
cctctggatcaaagctag
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integrated database retrieval system
