Trachemys scripta elegans (red-eared slider): 117882720
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Entry
117882720 CDS
T07347
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117882720 (SOX2)
Transcription factors [BR:
tst03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117882720 (SOX2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117882720
NCBI-ProteinID:
XP_034637325
LinkDB
All DBs
Position
9:94280817..94432138
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AA seq
315 aa
AA seq
DB search
MYNMMETELKPPAPQQTSGGGTGNSNSAANNQKNSPDRVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYTLPGGLLAPGTNTMTTGVGVGATLGAGVNQRMDSYAHMNGWTNGGYGMMQDQLGYPQ
HPGLNAHNAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSMGS
VVKTESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSAP
VPGTAINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaagcctcccgccccccagcaaacttcgggggga
ggaacgggcaactccaactcggccgccaacaaccagaagaacagcccggaccgggtcaag
agacccatgaacgctttcatggtgtggtcccggggccagcggcggaagatggcccaagag
aaccccaagatgcacaactccgagatcagcaagcggctcggggcggagtggaaactttta
tccgaggcggagaagagacctttcattgacgaagccaagcggctccgagccctgcatatg
aaggaacacccggattataaataccgaccccggaggaaaaccaagaccctcatgaagaag
gataagtacacgttgcccgggggcttgctggcaccgggcaccaataccatgaccactggg
gtaggggttggggccaccttgggagctggggtgaaccagaggatggacagttatgctcac
atgaacggctggaccaacggaggctatgggatgatgcaagaccagctcggctacccacag
cacccggggttgaacgctcacaacgcggctcagatgcagcccatgcaccgctacgacgtg
agcgccctgcagtacaactccatgaccagctcgcagacttatatgaacggatcgcccacc
tacagcatgtcttactcccagcaagggaccccggggatggccctgggatccatgggctcg
gtggtcaagacggagtccagctcgagtccccctgtagtcacttcttcttcccattcaagg
gctccatgccaagctggggaccttcgggacatgatcagcatgtatctaccaggtgctgaa
gtaccagaaccagctgccccaagcagacttcatatgtcccaacactaccagagtgcacct
gttcctggtacagccattaatggcacacttcctctatcacatatgtaa
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integrated database retrieval system
