Trachemys scripta elegans (red-eared slider): 117882749
Help
Entry
117882749 CDS
T07347
Symbol
DHX36
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117882749 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117882749 (DHX36)
03012 Translation factors [BR:
tst03012
]
117882749 (DHX36)
Enzymes [BR:
tst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117882749 (DHX36)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117882749 (DHX36)
Translation factors [BR:
tst03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117882749 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
AAA_14
ATPase
NPHP3_N
NACHT
ABC_tran
PhoH
Motif
Other DBs
NCBI-GeneID:
117882749
NCBI-ProteinID:
XP_034637388
LinkDB
All DBs
Position
9:complement(79253375..79288494)
Genome browser
AA seq
976 aa
AA seq
DB search
MSFEHRRDWSRGGGGGPRPSSSSAGGHEGRGGRGRHPSHLKGRDIGLWYARKQSQKSKEP
DRQQRAVVRMDEHREEQIVQLLNTVQTRNEKEQESVSWWSGEEEGQEVPVEKPTLAKTSV
KRRPILEKTFLDRDSEYLFQENEPDIDLNEKFREELRKKKFDPRYIEMQRFREKLPSYGI
RRELVTVINNNQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAISV
AERVAAERAEVCGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKQLSSVSHVI
LDEIHERNLQSDVLMTVIKDLLNVRPDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFP
VVEYLLEDVIEKLRYTPEDTDYRPRRKKGFMQGQISRPEKEEKEEIYRERWPDYLRQLRG
RYSAGTIDALEMMDDDKIDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQV
MFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKI
KETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEIL
RTPLEELCLQIKILRLGGIAYFLSRLMDPPSREAVMLSINHLMELNALDRQEELTPLGVH
LARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNT
KSDHLTIVNAFAGWEEVRRRGFRSEKDYCWEYFLSSNTLQMLLNMKGQFAEHLLAAGFVS
SKNPRDPKSNTNSDNEKLLKAVICAGLYPKVAKIRKSFSKKRKMVKVCTKTDGTVNIHPK
SVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDE
WIVFESPARIGNLVKDLRGELDDLLQEKIENPHPVDWNDTKSRDTAVLTAIIDLITTQEN
ESPRNYASRFQNERYS
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgagcaccgcagggactggagccgcggcgggggagggggcccccggccttcc
tcctcctccgcggggggacacgaaggccgagggggccgggggcggcaccccagtcacctc
aagggccgcgacatcgggctgtggtacgcgcggaagcagagccagaaaagcaaagagccc
gacaggcagcagagagctgtggtacgtatggatgaacacagggaagaacagattgtacag
ttgctgaatactgtccagactagaaatgaaaaagaacaagaatctgtgtcatggtggtcc
ggtgaggaagaaggtcaagaggtacctgtagagaaaccaaccttggcgaagacttctgta
aagcgcagaccaattttggagaaaacattcctagatcgagattcagaatatctctttcaa
gaaaatgagccggatattgatttgaatgagaaatttagagaagagttaagaaagaagaaa
tttgatcctagatacattgaaatgcagagattccgagagaaacttccttcatatgggata
agaagggaactagtaactgtgataaataataatcaggtgactgtgatcagtggtgagact
ggttgtggaaagactacacaagttactcaattcattctggatgactatatagagagaggg
aaaggatctgcttgcaggattgtatgtacccaacctaggaggatcagtgctatctcagtg
gcagagagagttgcagctgaaagggcagaagtgtgtggtaatggcaagagtacaggatac
cagattcgtctccagagtcggttaccaaggaaacaaggttccattttgtactgtacaaca
ggaatcgtcctacagtggctccagtcagacaagcaattgtccagtgttagtcatgttatt
cttgatgaaatccatgaaagaaatcttcaatcagatgtcttaatgactgttattaaagat
cttctaaatgttcgaccagacctgaaagtaatactgatgagtgctactttgaatgctgag
aaattttcagaatattttgacaattgtcccatgatccatatacctggattcactttccct
gttgtggaatatcttttggaagacgtaattgaaaagttaagatatactccagaagataca
gattacagaccacggcggaagaagggctttatgcaaggacagataagcagaccagaaaag
gaagagaaggaagaaatctatagagaacgatggccagattatctaaggcagctgcgagga
aggtattcagcaggtactatagatgcattagaaatgatggatgatgacaagattgatctt
gaccttatagcagcacttatcagacacattgtcctagaagaagaggatggtgcaatactg
gtgtttctcccaggctgggacaatattagcactttacatgacctcttgatgtcacaagtc
atgtttaagtcagataggttcattattatacctctgcattcactgatgcctactgttaac
cagacgcaggttttcaaaaagaccccacctggagtacggaaaattgtaattgctaccaac
attgcagagactagcattactatcgatgatgtggtatacgttatagatggaggaaaaata
aaagaaactcactttgatacgcagaacaacattagcacaatggcagcagagtgggttagt
aaagctaatgccaaacaaaggaaaggtcgagcaggaagagtccagccgggtcactgttat
catctatataatggtctacgtgccagcctattggatgattatcaattaccggaaatccta
aggacacctttggaagaactttgtttacaaatcaagattctaaggcttggtggaattgct
tattttctgagtaggctaatggatccaccatctcgtgaagctgtgatgttgtccataaat
catctaatggaactgaatgctttggatagacaagaagaactgactccattgggtgtccac
ttggcacgattgccagttgagccacatattggaaaaatgatcctctttggagctttattc
tgttgcttagatccagtactcacaattgcagccagcctcagcttcaaggacccctttgtg
attccactgggcaaagagaaagtagcagatgcaagaagaaaagaattatcaaagaatact
aaaagtgaccatctaactattgtgaatgcttttgcaggctgggaagaggtccggcgacgt
ggtttcagaagtgaaaaggattattgctgggagtattttctctcttcaaatacacttcag
atgctgcttaacatgaaaggacagtttgctgaacatctccttgcggctgggtttgtgagt
agtaaaaacccccgagatcccaaatctaataccaactcagataatgagaagttactcaaa
gcagtcatctgtgctggtttatatccaaaagttgcgaagatccgtaaaagctttagtaaa
aagagaaaaatggtgaaagtttgcaccaagacagatggaacagttaacattcatcctaaa
tctgttaacgtggaagagacagaattccattataactggcttgtgtatcacttaaagatg
agaactagcagtatttacctgtatgattgtacagaggtctctccatactgtcttttgttc
tttggaggagatatttccatccagaaggataaagatcaggataccattgcagtggatgaa
tggattgtctttgagtctccagcaaggataggaaatctagttaaggatttaagaggagaa
ttggatgatcttctacaagaaaaaattgaaaacccacaccctgtggactggaatgacact
aaatccagggacactgcagtgctgacagccattatagacctaatcacaacacaagagaat
gaaagtcccagaaactatgcctctcgatttcagaatgaacgttacagttga
DBGET
integrated database retrieval system
