Trachemys scripta elegans (red-eared slider): 117882988
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Entry
117882988 CDS
T07347
Symbol
LSG1
Name
(RefSeq) large subunit GTPase 1 homolog isoform X1
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117882988 (LSG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117882988 (LSG1)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
Pre-60S particles
GTPases
117882988 (LSG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
Sporozoite_P67
AIG1
Motif
Other DBs
NCBI-GeneID:
117882988
NCBI-ProteinID:
XP_034637782
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All DBs
Position
9:complement(102965180..102982771)
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AA seq
779 aa
AA seq
DB search
MEGGGRRGGADGPSPSDRWEPGTLRSGDAFPPDTGSRPRRPVPLPSGAGPGPAEAAGSPV
SFPRDGQGGQRCPGSLPFPPPHVQGLLTNLASGSRNEHFRGRDGCRWRPDQEKSVWDSGG
IGMGKKRSPGLGRALMKERSQAKRGSRQPDSWLHTSELNDGYDWGRLNLQSVTEQSSLEE
FLATAELAGTEFAAEKSNIKFVPSKATIVQLTGEETKNMKKLHEENRQFLCIPRRPYWDR
RTSAEKLKQAERESFLEWRRQLVRLEEEEKLILTPFERNLDFWRQLWRVIERSDIVVQIV
DARNPLLFRCQDLECYVKEVSSDKENIVLLNKADLLSREQRVAWAQFFEREGVKVVFWSA
LAEGMRLSAERKGLELEEAAEVASDSEADRSSEEEHRALQSGAESTLRGNALHLESRVLG
SDDDDSDEYEDCEEEEDAWQTCSEDDGEEEVKSSDPSCMESRTDRALGQSPAPLQSRHIS
NFSHLVQKNELLEIFRTMHTGKKVKEGEITVGLVGYPNVGKSSTINTILGNKKVSVSATP
GHTKHFQTLYVEPGLCLCDCPGLVMPNFVSTKAEMICCGILPIDQMRDHVPPISLICQHI
PRHILEATYGINIIRPREDEEPDRQPTSEELLTAYGYMRGFMTAHGQPDQPRSARYVLKD
YVSGKLLYCYPPPGIDPKDFQHRHERYTQHKAMQGNAEKSESNLNAKQIENVVDKKFFQQ
ENVRALTKGVQTVMGYKPGSGPVSLAASSSENVRGKPWKKHGNKNKKEKVRRITKHLDA
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggaggccggcgcggaggtgctgacggaccgtccccgtcggaccgatgggaa
cccggaacgcttcgctctggggacgcgtttccaccggacaccggaagtcggccgcggcgg
cctgtaccgttgccaagcggtgccgggccgggccctgctgaggctgcggggagcccggtc
tcctttccgcgggacggacaagggggacagaggtgtcctgggagccttcccttccccccc
ccccatgtgcagggtctcctcaccaacctggcttccgggtcacggaacgagcacttccgg
ggcagggacgggtgccggtggagaccagaccaggagaaaagcgtttgggacagcggaggc
atcggcatggggaagaagagaagcccgggcctgggccgagccctcatgaaagagcggagc
caggccaagcggggcagccggcagcccgactcctggctacatacaagtgagttaaatgat
gggtatgactggggccgcctcaaccttcagtcagtgacggaacaaagctcgcttgaggaa
ttccttgctacagcagagcttgcaggaactgaatttgcggctgagaaatcgaatatcaag
tttgttccttctaaggcgacgattgtccagctgacaggagaagagaccaaaaatatgaag
aaactccatgaggaaaacagacagtttttgtgtataccaagaagaccatactgggatagg
agaaccagtgctgagaagttaaagcaagcagagagagagagctttctggagtggagacga
cagcttgttcggctagaggaagaagagaaactgattttgaccccatttgaacggaattta
gacttttggcgccagctctggagagtcattgaaagaagtgacattgtggttcagatagta
gatgccagaaatcctctcctatttagatgccaagatctggaatgttacgtgaaggaagtg
agcagcgacaaagagaacatcgttctactaaacaaggcggatttgctgagcagagagcag
cgcgtggcttgggcgcagttctttgagagagaaggtgttaaagttgtgttctggtcagcc
ttggcagaaggcatgcggctgagtgccgaacgtaagggactagaacttgaggaggcagca
gaggtggcaagtgactctgaagctgacaggtccagtgaggaagagcacagagccctgcag
agcggtgcagaaagcacactcaggggtaacgctctgcatcttgaaagcagagtcctgggt
agtgatgacgacgacagtgatgaatatgaggactgtgaagaggaggaggatgcctggcag
acctgttctgaagatgatggtgaggaagaagtaaagtccagtgacccaagctgtatggaa
agcaggactgacagggctttagggcagagcccagcgccactgcagagcaggcacatcagt
aacttcagccatctggtacagaaaaacgaactgctggagatattcagaacgatgcatact
gggaagaaggtgaaggagggagagatcacagtagggctggtgggttaccctaatgttggt
aagagctcaacaatcaacacaatccttggaaacaagaaagtgtcggtgtctgccacgcca
ggtcacacaaagcactttcagactctgtatgtggagcctggcctatgtctctgcgattgt
cccggtctggtgatgccaaacttcgtctctacaaaggcagagatgatctgctgtggaatt
ttgcctatagaccagatgagggaccatgttccacctatctctctaatttgccagcatatc
ccacgacatattttagaagcaacctatggaataaatatcataaggcccagagaagatgag
gagccagatcgccaaccaacatctgaagagctgctaacagcatatggatatatgagagga
tttatgacagcgcatgggcagccagaccagccaagatcagctcgttatgtgttgaaagat
tacgtcagtggtaagctgttgtattgctatcctcctcctgggattgacccaaaagacttc
caacaccggcacgaaagatatacacagcacaaagctatgcagggcaatgcagaaaagtcc
gaaagcaatctgaacgcaaaacaaattgagaatgtggtggacaaaaaatttttccagcag
gagaatgtccgtgctctgacaaaaggtgtccagaccgtgatgggatataaacctggcagc
gggcctgtgtctttggctgcatccagctccgagaatgtcagaggaaagccctggaaaaaa
catgggaacaaaaacaaaaaggagaaggttcgcagaatcaccaagcacctagatgcatag
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