Trachemys scripta elegans (red-eared slider): 117883007
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Entry
117883007 CDS
T07347
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117883007 (FARSB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tst01007
]
117883007 (FARSB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tst03016
]
117883007 (FARSB)
Enzymes [BR:
tst01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
117883007 (FARSB)
Amino acid related enzymes [BR:
tst01007
]
Aminoacyl-tRNA synthetase
Class II (U)
117883007 (FARSB)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117883007 (FARSB)
Prokaryotic type
117883007 (FARSB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
DUF383
Motif
Other DBs
NCBI-GeneID:
117883007
NCBI-ProteinID:
XP_034637809
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All DBs
Position
9:complement(66957590..67010119)
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AA seq
600 aa
AA seq
DB search
MRSVTVAQASDMPTVSVKRELLFQALGRRYTDEEVDELCFEFGLELDEITSEKDIISKEQ
GDGKAEGASDIILYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPRYKRIMPANSDVQRL
IITEETAQVRSHAVAAVLRNITFSKDRYDSFIDLQEKLHQNICRKRALVAIGTHDLDTIS
GPFTYTARPPSEIRFKPLNQSKEYTGSEIMDLYRTDSQLKHYLHIIENKPLYPVIYDSNG
VVLSMPPIINGDHTKISLNTRNVFVECTATDITKAKIVLDILVTMFSEYCEKQFTVEAAE
VTSYNGKTCIYPELAYRREKVKPDLINKKIGISETPSSLAKLLTRMCLKSHVTGNGNSIE
IEIPPTRADIIHACDIIEDAAIAYGYNNIQMTIPKTYTIANQFPLNKLTELLRQDLAAAG
FTEALTFALCSQEDIADKLGVDISSTKAVHIANPKTAEFQVARTSLLPGLLKTIAANRKM
PLPLKLFEISDIVVKDSTKDVRARNQRNLCAIYYNKNPGFEVIHGLLDRVMQLLAVPPSK
ESGYLIKAAEDAAFFPGRCAEILAKGQSIGKLGVLHPDVITKFELTMPCSALEINIEPFL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtgtgactgtagctcaggcttctgacatgccgacggtcagtgtgaagcgggag
ctgctcttccaggcgctgggcaggcgctatactgatgaagaagttgatgaactttgcttt
gagtttggtctggagcttgatgaaattacatctgagaaggacataataagcaaagaacaa
ggtgatggaaaggcagagggtgcatcagatatcattctctataaaattgatgttcctgct
aaccgatatgatcttctttgtctggaaggattggtccgagggcttcaggtctttaaagaa
aggataaaggcccctagatacaaaaggattatgccagcgaatagtgacgttcaaaggctg
attattactgaagagactgcccaagttcgttctcatgctgtagctgcagtccttcgtaac
ataactttttccaaggatcgctatgatagtttcattgacctacaagaaaaactacatcag
aacatctgcaggaaaagagcgttagtagcgattggtacccatgacctggacacaatctct
ggtccatttacttatacagctagacctccttcagaaattagattcaagcccctgaatcag
tccaaggagtatactggttctgaaattatggatctatataggactgacagccaacttaag
cattatttacacataattgaaaacaaaccactttatccagttatctacgatagcaacggt
gtagttctttcaatgccaccaatcatcaatggagaccatacaaaaataagcctaaatacc
agaaatgtgtttgttgaatgcacagccactgatattacaaaggcaaaaattgtcctcgat
atcttagtcacgatgtttagtgaatattgtgagaagcaattcactgttgaagcagcagaa
gtaacttcttataatggaaaaacctgcatctatccagaactggcctaccgaagagaaaaa
gtgaaacctgatttaataaacaagaaaattggaatcagtgaaacaccatcaagtcttgca
aagctgctgaccaggatgtgtttgaagtcacatgtcacagggaacgggaacagtatagaa
attgaaatccctcctaccagagcagacattatccatgcatgtgatatcatagaagatgca
gcaatagcttatggttataacaacattcagatgactattccaaaaacatacaccatagcc
aatcaatttcctctcaataagctcacagaacttctgagacaggacttggcagctgctgga
ttcactgaagcactcacttttgcactgtgttcccaagaagatattgctgataaacttggt
gtggacatctcttcaacgaaagcagtacatatagctaatcccaaaacagcagaatttcag
gtggcacgcaccagcctcttgcctggcctcctgaagaccattgctgctaatagaaagatg
cctttgcctctgaaactttttgaaatctctgacattgttgtaaaagattccaccaaagat
gtacgtgcaaggaaccagaggaatctctgtgccatttactacaacaagaaccccgggttt
gaggtcatccatgggttgctggatagagtcatgcagctgctggctgtgccaccaagcaaa
gagagtggatatctaatcaaggcagctgaagacgctgctttcttccctggccgctgtgct
gagatccttgccaaaggtcaaagtattgggaagcttggagtccttcaccctgatgttatc
accaaatttgagctcaccatgccctgctctgccctagagatcaatattgagcccttcttg
tga
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