KEGG   Trachemys scripta elegans (red-eared slider): 117883033
Entry
117883033         CDS       T07347                                 
Name
(RefSeq) vertebrate ancient opsin-like
  KO
K04256  c-opsin
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tst01009]
    117883033
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:tst04030]
    117883033
Protein phosphatases and associated proteins [BR:tst01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117883033
G protein-coupled receptors [BR:tst04030]
 Rhodopsin family
  Vision
   Opsin
    117883033
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx
Other DBs
NCBI-GeneID: 117883033
NCBI-ProteinID: XP_034637851
LinkDB
Position
9:complement(61010085..61173908)
AA seq 395 aa
MTVPNISHSCSGVNSVWCSSSSNQRHGQEQNLSPTGHLITAICLGIIGSLGFLNNLLVLI
LFCRNKVLWSPINLLLMNISVSDMMVCIMGTPFSFAASTQGRWLIGPGGCIWYGFVNTLF
GTVSLISLAVLSYERYCTMMGTTEADATNYRKIWMGIFLSWMYSLFWTLPPLFGWSSYGP
EGPGTTCSVNWHSRDANNISYIICLFIFCLVIPFFIIVYSYGKLLCAIKQVSGVTKGMGR
TREQRVLIMVVVMVICFLLCWLPYGIMALIATFGKPGLITPSASIIPSVLAKSSTVYNPV
IYIFLNKQFYRCFCALLKCDKTSATTSNKFSSKSTRVCRTTPRVQDNNFTFVAASAGPPS
LERQEATISLQNPEPTMDNGPSAKREVLLVAHYSA
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgaccgtgcctaacatcagccacagttgcagtggtgttaacagtgtttggtgcagtagc
agcagcaaccagagacatggacaagagcagaatttgagtcctactggccacctgatcaca
gctatctgccttggcatcatcgggagcctgggcttcctcaataatctcttggtcctgata
cttttctgccggaataaagtgctatggtctccgattaacctgctgctgatgaacatctct
gtgagcgacatgatggtgtgcatcatgggcacccccttcagctttgccgccagcactcag
ggacgctggctcatcgggccaggtggctgcatctggtacggcttcgtcaataccctcttt
ggtacagtttcacttatatctttggcagtgctctcttatgaacgctactgtacaatgatg
ggaactacagaagcagatgccacaaactataggaaaatatggatgggaatcttcttatca
tggatgtactctttattttggaccttaccacccctttttggatggagtagctatggacca
gaaggaccagggacaacatgttcagtaaactggcattcaagggatgctaacaatatatcg
tatatcatatgtctcttcatcttttgccttgtaattccttttttcattattgtttactct
tatgggaagctgctatgtgctataaagcaggtgagtggtgttactaaaggaatgggccgg
acaagagagcaacgtgtactgatcatggtggttgtgatggtaatttgttttcttctttgc
tggctgccatatgggatcatggccctgatagctacttttggaaaacctggtctaattacg
ccgtccgccagcatcattccatcagtccttgcaaaaagtagtacagtctacaatccagtc
atctacatatttttgaacaaacaattttataggtgcttttgtgcacttctgaaatgtgat
aaaacatctgctaccaccagcaacaagttttcttcaaagtccacccgagtgtgccgcact
acaccaagggtacaggacaacaacttcacatttgttgctgcatctgcaggaccgccatcc
ttggaacggcaggaggccaccattagcttgcagaatccagagccaaccatggacaatggc
ccaagcgcaaaacgagaagtgctgcttgtagctcactatagcgcttaa

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