Trachemys scripta elegans (red-eared slider): 117883057
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Entry
117883057 CDS
T07347
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-3-like
KO
K06087
claudin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03272
Virion - Hepatitis viruses
tst04382
Cornified envelope formation
tst04514
Cell adhesion molecule (CAM) interaction
tst04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117883057
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117883057
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117883057
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117883057
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117883057
04147 Exosome [BR:
tst04147
]
117883057
Cilium and associated proteins [BR:
tst03037
]
Other cilia and associated proteins
Stereociliary proteins
117883057
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
117883057
Exosomal proteins of colorectal cancer cells
117883057
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM_230_134
TMEM37
MFS_MOT1
CdpA_N
Motif
Other DBs
NCBI-GeneID:
117883057
NCBI-ProteinID:
XP_034637900
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All DBs
Position
9:complement(51468006..51469081)
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AA seq
214 aa
AA seq
DB search
MSMGLEIGGVALSVVGWVGTILCCALPMWRVTAFMGNNIVTAQNVWEGLWMNCVVQSTGQ
MQCRVYDSMLVLPQDLQAARALVVIAIVLAMLGLMVALIGVQCTRCVEDGTTKAKITIVS
GVIFLLAGIMTLIPVCWSANTIIRNFYNPSMLESQKRELGASLYVGWAAAALQLFGGALL
CCSCPPKDEKYTPAKMAYSAPRSTGPSYDKRNYV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggggctggagatcggtggggtggctctgtcggtggtgggctgggtgggcacc
atcctgtgctgtgcactgcccatgtggagggtgactgccttcatggggaacaacatcgtg
acagcccagaacgtctgggaggggctgtggatgaactgcgtggtgcagagcacgggccag
atgcagtgcagggtctacgactccatgctggtgctgccccaggacctgcaggcagctcgc
gccctggtggtgatcgccatcgtgctggccatgctgggcctcatggttgccctcatcgga
gtgcagtgcaccaggtgcgtggaagatgggaccactaaggccaaaatcaccatcgtgtct
ggggtgatcttcttgctggccgggatcatgaccctcatccccgtgtgctggtcggccaac
accatcatccgcaacttctacaatccttcgatgttagagtcacagaagcgggagctggga
gcctccctctacgtgggctgggcagctgcagcactgcagctgtttgggggggctttgctc
tgctgctcctgcccccccaaggatgagaaatacactccagccaagatggcttactctgct
cctagatccactgggcccagctacgacaagaggaactacgtgtga
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integrated database retrieval system
