Trachemys scripta elegans (red-eared slider): 117883088
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Entry
117883088 CDS
T07347
Name
(RefSeq) syntaxin-3-like
KO
K08486
syntaxin 1B/2/3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117883088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117883088
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117883088
Membrane trafficking [BR:
tst04131
]
SNARE
Syntaxin (Qa)
Stx-PM
117883088
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117883088
Exosomal proteins of other body fluids (saliva and urine)
117883088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Spectrin_SYNE1
Mak10
Motif
Other DBs
NCBI-GeneID:
117883088
NCBI-ProteinID:
XP_034637955
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All DBs
Position
9:complement(27160404..27162669)
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AA seq
296 aa
AA seq
DB search
MKDRLEELRIRVNEDEDSLDIDDTLSFDNPVFKEDETNPMSKIFQEVSDISLGLSKLEEL
SESIHKTQQRVLCCTTEESVYEEKKELSNIKASFTSQAKVIQPQLYGIQDTLARDSKQWL
AGYRIHQSQLSVLISRYRDIITHHYAKEMEYVEKLKEQIIRQTELAGLSLCEEDINQLVE
SPVAPRIVGQDLEVLKAKQHLAMAHVRHQQLLDLEAQISELHSLFLHLEVLVSEQHEVIN
NIEYNVLHTLDYVSQSNEEVKKALKYERQSRISAALSAVLGLCACCTCLSCVAGTV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacagactggaggaattgaggatccgagttaatgaagatgaggactctttggat
attgatgatactctctcatttgataaccctgttttcaaggaggatgagaccaatcccatg
agcaagatattccaggaagtgtcagacatctcgctgggcctgagtaaactggaggagtta
tcagagagcatccacaagacgcagcagcgggtgctgtgctgcaccaccgaggagagcgtt
tatgaagaaaagaaagagctaagtaacattaaagcctccttcactagtcaggctaaagtc
atccagcctcagctctatgggattcaagacacactggcccgagacagcaaacagtggctg
gcaggataccgcatccaccagagccagctctccgtcctaatcagccggtaccgagacatt
atcactcaccattatgccaaggagatggagtacgttgagaagttgaaggagcagatcata
aggcaaaccgagctggcgggcttaagcctatgtgaagaggacattaatcagctagtggaa
agccctgtggctcctcggattgtgggccaggacctggaagtgctcaaggccaagcagcac
ttggccatggctcacgtacgccaccaacagctgctggacctagaggcccagatcagtgag
ctgcactcgctcttcctgcacttggaggtgctggtttcagagcagcacgaagtcatcaac
aacattgagtacaacgtcctgcatacacttgattacgtgtcccagtccaacgaggaggtg
aagaaagccctgaagtatgagcgccagtcgcggatctcggcagcactgtcagcggtgctg
ggcctctgtgcctgttgtacgtgcttatcatgcgtagctggcacagtgtag
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integrated database retrieval system
