Trachemys scripta elegans (red-eared slider): 117883127
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Entry
117883127 CDS
T07347
Symbol
HPS3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117883127 (HPS3)
Membrane trafficking [BR:
tst04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
117883127 (HPS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
117883127
NCBI-ProteinID:
XP_034638028
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Position
9:76220253..76256763
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AA seq
1010 aa
AA seq
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MVQLYNLHPFGSQQVVPSKQEPALFCCGRDALLVACAAAGCKVEAFAVGDQELCEPLGCF
NTLGRVLHMAYSEAGDYLVTIEEKNKATFLRAYMNWRCMSTGNTRVCVRMVGHKMEESYS
DSSKVQMSIVEMPLSDPPLCISCCPVNGDLLVGCKNKLVMFCLKYLVINQDLTVLDFKLS
LILHINNVTPTEVAFCAGYIALTTELDVLILKLEPIHKGADNTELYADKVRAPEKLVDEG
VKDEVPSVFSSQHESDDFVICQKPMELLGEESRLCGILVTLESTGLAKEDTEYFQVRYLL
YRRFTPDLSSFVFSVEETKLHSLQLLPMYQTGSSMAVNGKTAAKKELLCVFCFFSLPHVG
YLYAVGSLVELLSTYQYSEKSQQAVLTPQFLHVITSNSLQCFTVRCSAAAAREEDPYIDT
TMKACPPVSLDVCALRMQLFIGLKAICHFNNHVILLTKADSEDITERRKPPRRVLSRKAD
SVKLKTPPESEPGWNLYIVNTISTIQLYKEMVDYSKTYENVRTESCIHLLSEAHLLVRAA
LMDPSLMESEEKEKLLAAFRESCAHLGDCYSRFNTKDAHLALPYYKMSGLSITEVLKRID
SVVEGGTQKYEKGFIFYLNHSLYEDLNEELSKESAGKVLQIFHLAEPNQLPHVLCSPCMK
NVCPLMAMELLQKVELIVPSVVLTLTKAAMALKMGDLEAYKNEMDCYTEMRLAYGFIGEP
RLLRQQREGQIVPTELAVHLKETWPGLLVASMLALHENSKIELEEADSYFEMLCGKKEGT
NPQLLVDFWEALLVASSEKEILQELLFKLTSQYVWRLLRKQLPDTKPLKTTEDLINSCNH
YGLIFPWVTFIMSLGRTCDKYPEDLSKLQSLLCGPSVDIASLLPFLEPLSEDSNAGLSVH
VLCTTGLGEYEKSIDKLLEKCPEALIPYAQHELKDENRALWWNKLLPELCKRTRYVGDDY
SVLISSLKETLSVVAMELELRDFLNVLPEDGTAAFFLPHLLQCSKRKLVT
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctctacaacctgcacccattcggctcgcagcaggtggtgcccagcaagcag
gagccggcgctgttctgctgcggccgggatgcgctgctggtggcctgcgcggcggccggc
tgcaaggtagaggcgtttgccgtgggcgaccaggagctctgcgagccgctcggctgtttc
aacacgctgggccgggtgctgcacatggcatacagcgaggcgggagattatttggtgaca
attgaggagaaaaacaaggccaccttcctacgagcttatatgaactggagatgcatgtca
acagggaacactcgagtttgtgtccggatggtgggtcacaagatggaagagtcatacagt
gactcttctaaagtccagatgtcaattgtggaaatgcctctttcagatccaccattgtgc
atttcgtgttgtcctgtaaatggagatcttcttgttggctgcaaaaataaactggtcatg
ttctgcttgaaatatcttgtcataaatcaggatctgactgtattggattttaaactctcc
ttaattttgcacatcaataacgtcacccctacagaagtagcattttgtgctgggtacata
gctctaacaacagagttggatgttttaatcctgaagctggaacccattcataaaggtgca
gataatactgaactatatgcagataaagtcagagcaccagaaaagcttgtagatgaaggt
gtaaaagatgaagttccttcagtcttttcttcccagcatgaatcggatgactttgtcatc
tgtcagaagcctatggaactacttggggaggaaagcagactatgcggaatactggtaacg
ctggaatcaacagggttagcaaaagaagacacagaatatttccaagtgcggtacctccta
tacagacgttttactccagatctgtcatctttcgtcttctctgttgaagagaccaagttg
cactctctacagctactgcctatgtatcagacaggaagttccatggcagtcaatggaaaa
accgcagccaagaaagaattgctgtgtgtcttctgttttttctccttgccgcacgttggg
tatctctatgctgttgggagcttagtagagctgctttctacctatcagtactcggaaaaa
tctcagcaggcagttcttaccccacaattcctacatgttattacaagtaacagcttgcag
tgtttcacagtacgatgcagtgcagcggcagctcgtgaggaggacccatacattgataca
accatgaaggcttgcccacctgtgtctctagatgtctgtgcattaagaatgcagcttttt
atagggctgaaagctatttgtcacttcaacaaccatgtaattcttctgactaaggcagat
agtgaagatattactgaaagaagaaagcctccaagaagggtcctttccagaaaggctgat
agtgtcaaactcaagactccacctgagtcagaacctggctggaatttatatattgtgaat
actatttcaaccatccagctttacaaagaaatggtagactacagtaagacatatgaaaat
gtaagaacggagagttgcatccatcttctaagtgaggctcacttgttagttagagcagct
ttaatggatcccagtctgatggaatcagaagagaaagagaagctcctggcagcattcaga
gaaagttgtgctcacctaggagactgttacagcaggtttaacactaaggatgcccatctt
gccctgccttactacaagatgtctggcttatccataactgaagttttgaagagaatagac
tcggtggtagagggtggaacacagaaatatgaaaaaggatttatcttttacttaaatcat
tctctttatgaagatttaaatgaagagttaagcaaagaatcagcaggcaaagtgctccaa
atattccatcttgctgaaccaaaccagctgccccatgtgctctgcagtccgtgcatgaaa
aatgtatgtcccttgatggcaatggagcttttgcagaaagtggaactgattgtgccatca
gtggtattgacgctaaccaaagctgccatggctctaaaaatgggagacctagaggcatat
aaaaatgagatggactgttatacagagatgagactggcatatggctttattggggaacca
agacttctgaggcagcagagagaagggcaaattgttccaaccgaacttgccgttcatctg
aaggagacgtggcctgggttgctggtggcttcgatgttggctttacatgagaacagtaaa
attgaattggaagaagcagactcttacttcgagatgctgtgtgggaagaaggaaggtact
aaccctcagctcttagtagacttctgggaagccctccttgtagcaagctccgagaaagaa
atactccaggagctcttattcaagcttacttcacagtacgtttggagactattgaggaag
cagcttcctgataccaaaccactgaaaacaacagaggatctgataaactcctgtaatcat
tatgggttaattttcccttgggtgaccttcataatgtcattgggacgtacatgtgataag
tatcctgaagatctttcaaaactacagtctcttttatgtggtccatcagtcgacatagct
tcacttctgcctttcttggagccattatcagaagacagtaatgctggtctcagtgtccat
gttctttgcactacggggctaggagagtatgagaaatccattgacaagctcctagagaag
tgtcctgaagcactcataccatatgcccagcatgagctgaaagatgaaaatcgggcccta
tggtggaacaaactgcttcctgaactttgtaaacgaactagatatgttggagatgactac
tccgttctcatctcatcgctgaaagaaactttatcagttgttgccatggaactggagcta
agggatttccttaatgttctaccagaggatgggactgcagcatttttcctgccacatcta
cttcagtgcagcaaaaggaaattggtgacttaa
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