Trachemys scripta elegans (red-eared slider): 117883149
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Entry
117883149 CDS
T07347
Symbol
DKC1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1 isoform X1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117883149 (DKC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117883149 (DKC1)
03032 DNA replication proteins [BR:
tst03032
]
117883149 (DKC1)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
117883149 (DKC1)
Prokaryotic type
117883149 (DKC1)
DNA replication proteins [BR:
tst03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
117883149 (DKC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
PUA_elF2D
Pus10_C
UPF0113
RPA43_OB
Motif
Other DBs
NCBI-GeneID:
117883149
NCBI-ProteinID:
XP_034638082
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All DBs
Position
9:complement(45676305..45694583)
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AA seq
552 aa
AA seq
DB search
MADGEGFIAKKQKKKKDKKSLPDADVADIQHTEEFFIKPESRVAQLDTSQWPLLLKNFDK
LNVRTTHYTPLPSGCNPLKRDIAEYVRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHS
GTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIIRLHNAIENEIQLSRAIETLTGALF
QRPPLIAAVKRQLRVRTIYESKLVEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGG
QMQELRRVRSGIMGEKDHMVTMHDVLDAQWQYDNNKDESYLRRVIFPLEKLLTSHKRLVM
KDSAVNAICYGAKIMLPGVLRYEDGIEINQEIVVITTKGEAICMAVALMTTAVISTCDHG
IVAKIKRVIMERDTYPRKWGLGPKASQKMMMIKQGLLSKHGKPNESTPDSWKKEYVDYSV
AVKKEAEAPAAVAERVPKRKWETESENEEAAVAPSSPATLQPEEQSRKEKKKKKKEKKAK
EAAESEGELMEVVGSWTVSQSSRPRSVAALHHLYTPPCDTYKTRDTYSVCPCRLLLSPIS
IELHHCKPPQYS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggggaaggttttatagctaagaagcagaagaagaaaaaggataagaaatct
ctaccagatgcagatgttgctgacatacagcacacagaggaattcttcatcaaacctgaa
tcccgagtggctcagctggacacatctcagtggcccttgctactgaagaactttgacaag
ctaaatgtgaggacaacacactacacaccccttccctctggctgcaatcccctgaagaga
gacatcgctgagtatgttaggacaggcttcattaacctcgacaagccatccaacccttct
tcccatgaggtggttgcctggatccggcgcatcctccgggttgaaaagacagggcacagt
gggacgcttgaccccaaagtgacagggtgtctgattgtgtgcatcgaacgagcaacacgg
ctggtcaagtctcagcagagtgcaggcaaagagtatgtgggaataattcggctgcacaat
gctattgaaaatgagattcagctttccagggcaatagaaactctgaccggtgccctgttt
cagcgacctcccctcattgcagctgtcaagaggcaactgagggtccgaaccatctacgag
agcaaactggtagaatacgaccctgagaggagattaggtatcttctgggtgagttgtgaa
gctggcacttacatccgtacactgtgtgtccacctgggcctgctgctgggggttggaggc
cagatgcaagagctccggcgagtgcgctcgggaatcatgggagagaaggaccacatggtg
acgatgcacgatgtactggatgcccagtggcagtatgacaacaacaaggatgagagttac
ctgaggagggttatcttccccttggagaagctgctgacttcacacaaacggctggttatg
aaggacagtgcagttaatgccatctgctacggtgccaagatcatgcttcctggtgttctg
aggtatgaagatggcattgagattaatcaggagattgttgtcatcaccactaaaggggag
gccatctgcatggctgttgccttgatgaccaccgcagtgatttctacttgtgaccatggt
atagtggcaaagatcaagagggtgatcatggaaagagacacttacccccgcaaatggggt
cttggtcccaaggcgagtcaaaagatgatgatgatcaagcagggcctgttaagcaagcat
ggcaagcccaacgagagcacgccggattcctggaagaaggagtatgtggactacagtgtt
gctgtaaagaaagaggcagaagccccagcagcagtggccgagagggtaccaaaacgaaag
tgggagacagagagtgaaaatgaggaggcagcagtggcgccgtcctccccagccactctg
caaccagaggagcagagcaggaaggaaaagaaaaagaagaaaaaagagaagaaagccaaa
gaagctgccgagagcgaaggggagctaatggaagtggtaggtagctggacggtgtcgcag
agcagcaggcctaggagtgtggctgcattgcatcacttgtacacccctccttgtgatact
tacaaaacccgagacacctattcagtttgtccatgtaggttgctgctttcccccatcagt
atagagttgcaccactgtaagccgcctcaatatagctaa
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