Trachemys scripta elegans (red-eared slider): 117883190
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Entry
117883190 CDS
T07347
Name
(RefSeq) caltractin-like isoform X1
KO
K10840
centrin-2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117883190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117883190
03036 Chromosome and associated proteins [BR:
tst03036
]
117883190
03400 DNA repair and recombination proteins [BR:
tst03400
]
117883190
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
117883190
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117883190
Centrosome duplication proteins
Centriole replication proteins
117883190
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117883190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
AIF-1
EF-hand_5
EH
Dockerin_1
EF_EFCAB10_C
HerA_C
DUF1411
EF-hand_11
SPEF2_C
FCaBP_EF-hand
Motif
Other DBs
NCBI-GeneID:
117883190
NCBI-ProteinID:
XP_034638167
LinkDB
All DBs
Position
9:complement(42055566..42066484)
Genome browser
AA seq
207 aa
AA seq
DB search
MQCRHTVGGALCETGWGRQAGSLMLVIHLVSCSTNVSKASSPKKVMEGAVTRKKVAPKLV
LTEEQKQQLREAFDLLDTDGTGTVDVKDLKVSIRALGYEPKKDEMKKIVSEVDKEGSGKI
NFDSFLYAMTQKMSEPESREDILKAFKLFDDNGTGKISFQNLKRVAGEIGENLTDEELQE
MIDEADVDGDGEVNEQEFLRIIRMNSM
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtagacataccgtgggaggtgccctttgtgagacagggtggggcaggcaggct
gggtccctaatgctagtgatccacctggtctcttgttctactaatgtttccaaggcttcc
agccccaagaaagtgatggaaggggcagtgacccggaagaaggtggcacccaagttggta
ctcactgaagaacagaaacagcagttgcgagaggcctttgatttgcttgataccgatggc
actggtactgtcgatgtgaaggacttgaaggtatccataagagcccttgggtatgaaccc
aagaaagacgagatgaagaaaattgtatcagaagttgataaggaaggatcagggaagatc
aacttcgattcctttttgtatgcgatgactcagaaaatgtctgagccagaatccagagag
gacattctgaaagctttcaagctctttgatgacaatggaactggcaaaatctctttccaa
aatctcaaacgtgtggccggtgagattggggaaaacctcacagatgaggagctgcaggaa
atgattgatgaagcagatgtggatggagatggggaagtgaatgaacaggagttcctgcgg
attataaggatgaacagcatgtag
DBGET
integrated database retrieval system
