Trachemys scripta elegans (red-eared slider): 117883192
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Entry
117883192 CDS
T07347
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117883192
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
117883192
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF3824
DUF7255
Motif
Other DBs
NCBI-GeneID:
117883192
NCBI-ProteinID:
XP_034638171
LinkDB
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Position
9:complement(21266220..21280235)
Genome browser
AA seq
280 aa
AA seq
DB search
MSIMYVSYLLDKETSMYPGSVRCSNNNNNLPVQNFVSTPSYSDYMGYHHVPSMDNQGQSS
GAWGSHYGTQREDWNTYGPGPSSTVTAAQINGSSPGQISYSSADYNSLNPAGSGVLPPVG
TINTEQISPNSQRHSSYEWMRKTVQSTSTGKTRTREKYRVVYTDHQRLELEKEFHYNRYI
TIRRKSELAANLRLSERQVKIWFQNRRAKERKLMKKKMTHFDGTSLSSMQSDSGSVSPIP
GHNPQTHSEMSSSLFPPPPPPLPMNSLQHNGNLQQVVASQ
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatgtacgtgagttatcttttggataaagaaaccagcatgtatccaggatcc
gtaaggtgcagcaacaacaacaacaacctgccagtgcaaaactttgtctccactccatcc
tattcagattacatgggatatcatcatgtgccaagtatggacaaccaaggacagtcttcg
ggagcttggggatctcactatggcacgcaaagggaggattggaatacttatggcccagga
ccctccagcacagttactgctgcacaaatcaatggctcgtctcctgggcagatctcctac
agctctgctgattacaattccctgaatcctgctggatctggggttttacctcctgtaggt
acaattaacacagagcaaatctctcccaacagtcaaaggcacagctcttatgaatggatg
aggaaaacggtgcaatccacttccacaggtaaaacaagaacaagagagaagtaccgggtg
gtttacacagatcatcagagattagaactggagaaggaatttcattacaacagatacatt
acaatcaggaggaagtctgaacttgcagcaaatctaagactttccgagagacaggtgaaa
atctggttccagaatcgcagagccaaagaaagaaaattaatgaagaagaaaatgactcat
tttgatggcaccagccttagctctatgcagagtgactctggctcagtgagccccatccca
ggacataacccacagactcattcggaaatgtccagttctttatttcccccgccacctcct
ccacttccaatgaatagcttacagcacaatgggaaccttcagcaggttgtggcctctcag
taa
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