Trachemys scripta elegans (red-eared slider): 117883245
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Entry
117883245 CDS
T07347
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03013
Nucleocytoplasmic transport
tst03015
mRNA surveillance pathway
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117883245
09122 Translation
03013 Nucleocytoplasmic transport
117883245
03015 mRNA surveillance pathway
117883245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117883245
03041 Spliceosome [BR:
tst03041
]
117883245
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
117883245
Spliceosome [BR:
tst03041
]
Common components
Common spliceosomal components
Cap binding complex
117883245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117883245
NCBI-ProteinID:
XP_034638253
LinkDB
All DBs
Position
9:complement(874432..878665)
Genome browser
AA seq
168 aa
AA seq
DB search
MSGVLSATLSGLNSDSYCEISQYRDQHFRGSRYLQEKALKFSCTLYVGNLSFYTTEEQIQ
ELFSKCGDVKRIVMGLDKVKKTPCGFCFVEYYTRADAEHAMRFINGTRLDDRIIRTDWDA
GFKEGRQFGRGKTGGQVRDEYRTDYDVGRGGFGKIIQMQKTNHQTIIY
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggtgctgagcgccacgctgagcggcctcaacagcgactcctactgcgagatc
agccagtaccgggaccagcacttccggggtagccgatacctacaggagaaggccctgaag
ttctcttgcacactgtatgtagggaacctgtccttttacaccaccgaggagcagatccag
gagctcttctccaaatgcggagatgtcaagaggattgtcatggggctagacaaggtcaag
aaaaccccttgtggcttctgctttgtggaatattacacaagagcagatgctgagcatgca
atgaggtttatcaatggcacccgactggatgaccggatcatcaggactgactgggatgca
gggtttaaggagggacgacagtttgggagaggaaagactggaggacaggtgcgagatgag
taccggacagactatgatgtgggaagaggtggctttggcaagatcattcagatgcagaaa
accaatcaccagactataatctactaa
DBGET
integrated database retrieval system
