Trachemys scripta elegans (red-eared slider): 117883275
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Entry
117883275 CDS
T07347
Name
(RefSeq) transforming growth factor beta activator LRRC32-like isoform X1
KO
K26316
transforming growth factor beta activator LRRC32
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117883275
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_LRWD1
LRR_14
LRR_9
LRR_EndoS
LRR_6
Motif
Other DBs
NCBI-GeneID:
117883275
NCBI-ProteinID:
XP_034638328
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All DBs
Position
9:25845074..25849639
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AA seq
705 aa
AA seq
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MFLSEHRLAERGYLLLWLLPSVLKAQPSAEVSPKPLPCQQSSVQVSCQGLGLRTFPEKLG
HGVKQLDLSDNFIQNLTESCTSKLGQLEHLNMHFNQLATVSEMALTHLTHLHSLLLAANH
LDRNYFTNGRAFGSLRNLKVLDLSANNLDSDMAAWYFSKLTSLKKLDLSWNKMTRLPGSI
FQGTLKLREINLNNNYITEIEEGAFEALLNLKVVNLAMNSLHCISGFSLTQLQVLNLSYN
ALEFFVTEERKEHYQLQVLDLSHNKLIYFPELPKMHRLTHLNLSDNAMVSLAPSSTNTAE
FRLQYDEMARPNISLNIYNAAARLSKITDLDLSSNLLNLFPVTFLHNLSSLQNLNMAKNC
LHNIAVESSPGDMESKEPGVMRDNAFLSVRSLDLQDNFIHSLPPWFFGILPKLETLDLGS
NSLQPCESQNANKREIPIGHNSDQRGNCTSFCDIPQLKYLSLRRNNIVRLYPYMFNQTSL
VSLDLSENEDLFMPKGALEGLEFSLQKLSLRGNQMDNNKTEFPCLKMLKKLDISDNKLSL
LPPDLVCSPLENLDIRNNNLQALEKPATVRWSSSLNHLNVAGNPFSCCALSWLEILQAAH
VSVLDLNETLCSYQDKNRNFSTKIANKTMWLCPHQIGNRYLMVLMVVVITLCFLFLSCGI
CCRLKKSRQLSKYLGFRSNRVDPIPYHPNKEKRTEQIAIDRVTEV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtcagaacaccggctggctgaaagaggatatttgctgctctggctgctccca
tctgttctcaaagcccagcctagtgcggaggtgagcccaaagcctctgccatgccagcag
agctcagttcaggtctcatgccaaggtcttggcctccgcacatttccagagaagcttggc
catggggttaagcagctcgacctctctgacaacttcatccaaaacctgacggaaagctgc
acatcaaagttagggcagctagagcacctcaacatgcatttcaaccaattggcaactgtg
tcagaaatggccctgactcatctaactcatcttcactctctgctcctagctgcaaaccac
cttgataggaattacttcaccaatggaagagccttcgggtcactgaggaatctaaaggtc
ctggacctttctgcaaataatttggacagtgatatggcagcctggtacttcagcaaactc
acctctttaaagaaactggatctgtcctggaacaagatgaccaggctgccagggagcatc
ttccagggaactctaaagctgagagagatcaaccttaacaataactacatcacggaaata
gaggaaggagcttttgaggctctattaaatctaaaagtggtgaatttagccatgaattcc
cttcactgtatctcgggcttcagcctcacacagctgcaagttttaaatctcagttacaat
gccctggagttctttgttacggaggagagaaaggaacactaccagcttcaggtgctagat
ctgagtcataacaaactgatctactttccagagcttcccaagatgcatcgcctcacacac
ttaaacctctctgataacgccatggtctctttggctccaagttccaccaatacagcagag
ttcagactgcagtatgatgagatggcaagacctaacatatccttgaatatttacaatgca
gcagctagactgtcaaagataactgacttagatctcagcagtaacctgttgaatttgttc
ccagttactttccttcacaatctgagctccctccagaatctcaatatggctaagaactgt
ctccataatatagctgtggagtcatctcctggtgatatggaaagcaaggagccaggcgtg
atgcgtgacaatgcctttctgtcagtgcgatcactggatcttcaagacaatttcattcat
tccttgccaccgtggttttttggtattctgcccaaactggaaacacttgaccttggttct
aacagcctccagccttgtgagagccagaatgctaataaaagagagatcccaataggtcat
aactcagatcaaagaggtaactgtacatccttctgtgacataccgcagctgaagtatctg
agtttacgtaggaacaacattgtgaggctatatccttacatgttcaaccaaacctctttg
gtctccctggatctgtctgagaatgaagacttgttcatgccaaaaggagctctggagggt
ttggaattctctttgcagaagctctctctgagaggaaatcagatggacaacaacaagaca
gagttcccttgtctgaagatgctgaaaaagttggacatctcagacaacaagttgagtctt
ttgccccctgatcttgtctgctctccactggaaaatctggacattcgcaataacaatctc
caggccttagagaaacctgccactgtaagatggtccagcagcctcaatcatctgaatgtt
gctggcaatccctttagctgttgtgcactgagctggctggaaattctacaagctgcccat
gtgagtgtgttggatctgaatgaaactctgtgctcttatcaggacaagaacaggaacttc
tcaactaagatagccaacaagaccatgtggctttgtcctcatcagataggaaatcgctac
ctgatggtattgatggtggtggtgatcactctttgctttctgtttctcagctgtgggata
tgctgtcgtctgaaaaagagtcgtcagctgtcaaagtatctgggattcagaagcaacagg
gtggaccccattccttatcatccaaataaggaaaagagaactgaacagatagcaatagac
cgagttacagaagtatag
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