Trachemys scripta elegans (red-eared slider): 117883325
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Entry
117883325 CDS
T07347
Symbol
CHRD
Name
(RefSeq) chordin
KO
K04657
chordin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117883325 (CHRD)
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Gene cluster
GFIT
Motif
Pfam:
CHRD
VWC
FnI_RECK
Motif
Other DBs
NCBI-GeneID:
117883325
NCBI-ProteinID:
XP_034638446
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All DBs
Position
9:96357268..96377729
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AA seq
947 aa
AA seq
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MAAVPLLLAGLLPLALCPAPGGASRPKPLLPIQPEKDPLPSKGAAGCSFGGRFYALEDTW
HPDLGEPFGVMHCVVCYCEPQRNRRGKPTGKVSCKNIKHDCPALPCSESVLLPGHCCKTC
PKASPSIPEKRPEPIFDSFEYFQDKEDDLHKSYNDRSYLSSEDLARDDSRTDFVALLTSG
AEPWLSLSSAVAKARFTLVRSYLLFSINYERLGRPSRVRFTDPDGNILFEHPVQKSVSLQ
DGMICGMWRNLHKPSIRLLRAEQLRISLVTKSQPAGEIQGPIIKHRALFAETFSAILTSV
DSTHMGTGGIAMLTLSDTENNLHFILMAKGLLEPADKEFPWVSLRVRILHQNRVLREVRA
NITLQDPDFAEVLSDLSSREMLWLAQGQLKITAETEGRRRRQIAGYITARKSCDTLQSVL
CGGDALMPTKTGAVGSAKLALHENGTLEYQVQVAGTASEVISVTLETKPRRKNKRNVLFD
MTPSYREGLASGTWQHMNARDTHMLLQSELFLNVATKDFEEGEVRGQISSLLYSGLLARY
TELPIPLAGQLVSPPVRTGSAGHAWVSLDEHCHLHYEIVVGGLGKSDDVAISAHLHGVAE
LGERGHEHARLLKGFYGTEAQGVVKDLDAELLRHLAQGTAFLQVSTKVNPRGEMRGRVHI
PNQCESGGVRLAPEEDELLEEPKPKDPEQLKKDPNSCFFEGQHRAHGSRWAPAYDRKCSL
CSCQKRTVICDPILCQPLNCTQQVHLEDRCCPVCEERKASQEELRAEKARDSSEGCYFDG
DKTWRGAGTRWHPVVPPFGLIKCAICTCKGATGEVHCEKVQCPRLTCSNPVRVSPSDCCK
QCPAPEKSPPELSDMMQADGPRACRFGRQWYMNNESWHPTVPPFGEMKCITCWCVSGETH
CQRQECSPASCSSHAKKEIRCCARCREVAPEEAQEKLRADAPEAWSH
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtgccgctgctgctggccgggctgctgcccctcgccctctgccccgcgccg
ggcggcgcctcccgccccaagcccctgctgcccatccagcccgagaaggacccgctcccc
tccaagggggcggcaggctgctcgttcggaggaaggttctatgccctggaggacacttgg
cacccagacctgggcgagccctttggggtgatgcactgtgtggtctgctactgcgaaccg
cagaggaatcgccgagggaaaccaacaggcaaagtcagctgtaagaatattaagcacgac
tgtcccgccctgccctgcagtgagtctgtcctgctgccgggacactgctgcaagacctgc
ccaaaggcctctcccagcatcccagagaagaggccagagcccatctttgacagcttcgag
tatttccaggataaggaggatgacttgcataagagctacaatgaccgttcctacctgagt
tcggaggaccttgcccgggatgacagccgcacagactttgtggccttgctgaccagtggc
gcagagccctggctgtcactgtccagcgccgtggctaaagccaggttcaccctcgtacgt
tcctacctgctcttctccatcaactacgaaaggctgggccggccgagccgcgtccgcttc
accgaccccgacggcaacatcctgtttgagcaccccgtgcagaagagcgtctccctgcag
gacggcatgatctgtggcatgtggcggaacctgcacaaaccctccatccgcctgctgagg
gcggagcagctccgcatctccctggtcaccaagtctcagccagccggcgagatccaaggc
ccaatcatcaagcaccgggccctcttcgcagagaccttcagtgccatcctgacctccgtg
gactcaacccacatgggtacggggggcattgccatgctgaccctgagtgacaccgagaac
aacctgcacttcatcctcatggccaaggggctgctggagccggcagacaaagaattccct
tgggtttcacttagggtccggatcctgcaccagaaccgggtgctgcgtgaggtcagggcc
aacatcaccctgcaggacccagacttcgcggaggtgctgagcgacctgtcgagccgcgag
atgctgtggcttgcgcaggggcagctgaagatcacggcagagacggagggcaggcgccgg
cgccagatcgccggctacatcactgccaggaagagctgtgacaccctccagagcgtgctg
tgcggaggagacgccctgatgccaaccaagacgggggctgtgggatctgccaagctggcg
ctccatgagaacgggacgctggagtaccaggtccaggtagcagggacggcgagtgaggtc
atcagtgtcaccctggagaccaagccgcggaggaagaacaaacgcaacgtcctgttcgac
atgacgcccagctacagggaggggctggccagcgggacctggcagcacatgaatgcccgg
gacacccacatgttactgcagagcgagctcttcctcaacgtggccaccaaggactttgag
gagggggaagtgcggggacagatcagctccctgctgtacagtggcctcctggcacgatat
acagagctgcccatccccctggctggccagctggtgtctccccctgtgcggaccggctcg
gcgggacacgcctgggtctccctggacgagcactgccacctgcactacgagatcgtggtg
ggcgggctcggcaagtcggacgacgtcgccatcagtgcccacctgcacggcgtcgccgag
ctgggcgagcgcggccacgagcacgcccgactcctcaagggcttctatggcaccgaggcc
cagggcgtggtgaaggacctggacgcggagctgctgcgccacctggcccagggcacggcc
ttcctgcaagtcagcaccaaagtcaacccccgcggggagatgcgggggagggtgcacatt
cccaaccagtgcgagtcggggggcgtccggctggcccctgaagaggacgagctcctagaa
gagcccaagcccaaagaccccgagcagctgaagaaggaccccaactcctgcttctttgag
gggcagcaccgagcacacggctctcgctgggccccggcctacgacaggaagtgctccctc
tgcagctgccagaagcgcacggtgatctgtgacccgatcctctgccagcccctgaactgc
acccagcaggttcacctagaggaccggtgctgcccggtctgtgaagagaggaaggcaagc
caggaagagctgagagcggagaaggcccgggacagcagtgagggctgctacttcgacggc
gacaagacatggcgaggagccggcacccgctggcaccccgtggtccccccctttggcctg
atcaaatgcgccatctgcacctgcaagggagcgacgggtgaagtgcactgtgagaaggtg
cagtgcccgcgcctgacctgcagcaaccccgtccgagtcagcccgtccgactgctgcaag
cagtgcccagctccagagaagagcccccctgagctgtcggacatgatgcaggcagacggg
ccccgggcctgccggtttgggcgccagtggtacatgaacaacgagagctggcacccaaca
gtgccccccttcggggagatgaagtgcatcacctgctggtgtgtgtccggggagacccac
tgccagcgccaggaatgttcccccgcttcctgctccagtcatgccaagaaggagatccgc
tgctgcgcccggtgccgggaggttgccccagaagaagcccaggagaagctcagagctgac
gccccagaggcctggagccactag
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