KEGG   Trachemys scripta elegans (red-eared slider): 117883329
Entry
117883329         CDS       T07347                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tst01009]
    117883329 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tst04121]
    117883329 (TRIM42)
Protein phosphatases and associated proteins [BR:tst01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117883329 (TRIM42)
Ubiquitin system [BR:tst04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    117883329 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N DUF7368
Other DBs
NCBI-GeneID: 117883329
NCBI-ProteinID: XP_034638451
LinkDB
Position
9:63887054..63895997
AA seq 734 aa
MANTLCLSWPCCPGCHCCPPLERTEEECCSCWRFLFTQERNCNCFPCPYAEGRACQCCHC
SCSENPNCRWCCCSCSNDPDCKCCCCATDENTSCQYYESRCCRNTIYASYLPRATRRRHS
KVALTSFGSKSNTSIITLERDASGHAFRDQLICPLCKQLYLYPFMLPCNHCICEKCISKS
KAQAEVTETFFIIVCPVCVKAHCLPYTNKTQLRMNYLRAKLARRYMRRHGFLRWRFDRTQ
APIYCQVCKEKTKKASKRCLTCRLNFCNECLRLYHSETTTQDHIFTKAYREDQGECCCLL
HPNSNLSKYCLDDHELICEFCSDSLHNDHETLPLPVACSNEAASLFSAIAKFKKVRYGVD
NDLMEILLLKNNFKTYKETKRKEIRNGFLKLRNILREQEKEMMELLENIELKKEKGIMEY
VSHTSIKISQMDSLIQYSKEALKEENQIAFLQSANFLVNEIEDAITNIYQPSARLREDPI
QNLKLNFEELSANLHDLFQSPVREKQSADKANKAPYPCNSDIMVPRKISSTHAEKHPTVL
RSPSLSTLNSQYESSVMRKEMCGRPNSTPPPHRKEHNEIFAFWDASTQVPRKERNHQSYS
ISHNPEPFDNGSSMVPGLVIIYQTLVYPRAAKIYWTCPTEDVEFFDVEFYEVVSVSPDNI
VQTQLAGELHGIKHQNLEIHNLDPNTEYLFKVRAININGPGQWSDICKVVTPDGHGKARG
RWGLLRSIQSAFYK
NT seq 2205 nt   +upstreamnt  +downstreamnt
atggccaatactttatgcctaagttggccatgttgcccgggctgccattgctgcccgcca
ctggaaaggactgaggaagaatgctgttcgtgttggcgtttcctttttactcaggagcgg
aattgcaactgtttcccctgcccatatgcagaaggcagagcttgccaatgttgtcactgc
tcatgttcagagaacccaaattgccgttggtgctgctgctcctgttcaaatgacccagac
tgcaagtgctgttgctgtgccactgatgagaacaccagctgtcagtattatgagagcaga
tgctgcaggaataccatctacgcatcataccttcccagagccacaaggagacgtcattca
aaagttgccttgacaagctttggaagtaaaagtaacacatcaatcattactctggagagg
gatgcatcaggacatgcttttcgtgaccaactcatttgtccattgtgtaaacaactgtat
ctctacccatttatgctgccatgcaaccactgcatttgtgagaaatgcataagtaaaagc
aaagcccaggctgaagtaactgaaactttcttcatcattgtatgcccagtgtgtgtcaaa
gcacactgcctcccctacactaataaaactcagttgaggatgaattacctgagagccaaa
ctggctaggagatacatgcgcagacatggctttctgaggtggagatttgacagaacccaa
gcaccaatctattgtcaagtttgcaaagagaagacaaagaaggcatccaagagatgtctc
acatgccggctgaatttttgtaacgagtgtctaaggttatatcacagcgagaccactact
caagaccacatatttaccaaagcctatcgagaagatcaaggagaatgctgttgtttactc
catcccaactcaaacctttctaaatactgtctagatgaccatgagctaatctgtgagttc
tgcagtgactcactgcacaacgatcatgagacactacccttgccggtggcatgttcaaat
gaggctgcttcactcttcagtgctattgccaagtttaaaaaagtccgatatggggttgat
aatgacctaatggaaatccttttgctaaagaacaattttaagacctacaaagaaactaaa
aggaaggagatcagaaatggattcctcaaattacggaacattctccgtgaacaagagaag
gagatgatggaattgcttgagaacattgaacttaaaaaagagaagggaattatggagtat
gtgtcacacacatccataaaaatctctcaaatggatagccttattcaatattctaaggag
gctttgaaggaggaaaaccagattgcatttctgcagtctgcaaactttttggtaaatgaa
atagaagatgcaattactaatatttatcagcccagcgcacgactcagggaagaccctatt
cagaaccttaaactcaactttgaagagctttcagccaacttgcatgaccttttccaatca
cctgttagagagaagcaatcagctgataaagcaaacaaagctccttatccctgtaattca
gacataatggttccaaggaaaatttccagtacccatgcagagaaacatccaactgtgctc
cgaagtccatctttatcaaccttaaattcacagtatgaatcaagtgtgatgaggaaagaa
atgtgtggaagaccaaattccacacctccccctcatcgtaaagagcataatgaaatcttt
gcattttgggatgcatctactcaagttccaagaaaagaaagaaaccatcaaagctacagt
atcagtcacaatccagaaccatttgacaatggatcatctatggttccaggcctagttatc
atctaccagactcttgtatatccaagggcggcaaaaatttactggacatgtcccacagaa
gacgtggaattctttgatgtagagttctatgaagttgtttctgttagtcctgataacatt
gtccagacacaattagctggagaattgcatgggataaagcatcagaaccttgagatacat
aatctggatcccaacacagaatatctctttaaagttcgtgccatcaatataaatggtcca
ggtcaatggagtgacatttgtaaggtagttactccggatgggcatgggaaagccagaggc
agatggggcttgctgcggagtattcagtccgctttctataaatag

DBGET integrated database retrieval system