Trachemys scripta elegans (red-eared slider): 117883378
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Entry
117883378 CDS
T07347
Symbol
GIGYF2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117883378 (GIGYF2)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117883378 (GIGYF2)
Surveillance factors
Other surveillance factors
117883378 (GIGYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
SBP_bac_1
Motif
Other DBs
NCBI-GeneID:
117883378
NCBI-ProteinID:
XP_034638530
LinkDB
All DBs
Position
9:55767680..55928186
Genome browser
AA seq
1278 aa
AA seq
DB search
MAAETQTLNFGPEWLRALSSGGSVTSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
DLLDKEFQPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGTVVGAPRGRS
SSRGRGRGRGESGFYQRSFDEVEGGFGRGGGREMHRSQSWEERGDRRFEKPGRKDPVRPN
FEEGGTTTAGRKHEFIRSESENWRIFREEQNGEDDDGGWRLAGSRRDGERWRPHSPDGPR
SAGWREPMERRRRFEFDFRDRDDERGYRRVRCGSGSMEDDRDSLPEWCLEDAEEEMGTFD
SSGAFLSLKKVQKEPIPEEQEMDFQPVEEGEEPSDSEGDQGEEAKELEKTTKREGDKRDT
ITAEAAEEAVRAPSPSTQSGTPPKLQPQEPLQASLFERKEECVPERIEKMEDKENQMVNT
PPSKVPSRGEDLTPAIQPLPQISPATVSPVHLSPPLSNTNPALKPVQTSVSAAPGMGNIL
ADPDDEEGLKHLEQQAEKMVAYLQDSALDDERLAAKLQEHRAKGSSMPLLHEAMQKWYYK
DPQGEIQGPFSNQEMAEWFQAGYFTMSLLVKRACDENFQPLGDIMKMWGRVPFTPGPAPP
PHLGEMDQERLTRQQELTALYQMQHLQYQQFLIQQQYAQVLAQQQKAALSSQQQQQLALL
LQQFQALKMRISEQNLMPSVTRSVSVPDASSIWELQSTASQPTVWEGSSVWDLPIDTAAQ
GPALEQLQQLEKAKAAKLEQERREVEMRAKREEEERKRQEELRRQQEELLRRQQEEERKR
REEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRQREEL
LRKQEEEAAKWAREEEEAQRRLEENRLHMEEEAARLRLEEEERKRKELELQRQKELLRQR
QQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSSSGACQSQTTLSLAEIQKLEEERERQ
LREEQRRQQRELMKALQQQQQQQQQQQKMSGWGNVTKPTGATKSLLEIQQEEARQMQKQQ
QQQQQQPNRVRNTTHSNLHSSIGNSVWGSLNSNPTTQWASDLVSSIWSSADTKNSNMGFW
DDAVKEMGPRNSTNKNKSNASLSKSIGITSRQNKKVEEEEKLLKLFQGVNKAQDGFTQWC
EQMLHALNTANTLDVPTFVSFLKEVESPYEVHDYIRAYLGDTPEAKEFAKQFLERRAKQK
ASQQQQQDSVWGMNHSALHSVFQTNQSNNQQSNFEAVQSSKKKKKQKMVRADPSLLGFSV
NASSERLNMGEIETLEDY
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaactcagacacttaactttgggcctgaatggctgcgagctctgtccagt
ggcgggagcgtgacttcgcctcccctttctcctgctttgccaaagtacaaactagcagat
tatcgctatgggagagaagaaatgttagcacttttcctaaaggataataagataccttca
gaccttctggataaggagtttcagcctattttacaggaggagcccctgccaccactggca
cttgtaccttttacagaagaagaacagagaaatttctccatgtctgtaaacagtgctgct
gtcctgcggttgacgggacgaggaggaggaacggtggtaggggctcctcgaggtcgaagt
tcctctagaggtcgaggcagaggccgaggagagagtggtttctaccaaagaagttttgac
gaagtggagggtggatttgggcgaggaggaggcagggaaatgcatagatctcagagctgg
gaagaaaggggagacaggcggtttgaaaaaccagggcgaaaagatccagtgagaccaaat
tttgaggaaggtgggacaacaacagcagggaggaaacacgagtttattcgctctgagagc
gagaactggcgcatcttcagggaggagcaaaatggggaagatgatgatggaggctggaga
ctggctgggtcacggagggatggtgagaggtggcgtcctcatagtccagacggtcctcgt
tctgcaggctggcgagaacctatggagagacggcgaaggtttgaatttgatttccgagac
cgggatgatgagcggggttaccgacgagtgcggtgtggcagtggcagtatggaagatgac
agggacagtctccctgaatggtgcttggaagatgcagaagaagaaatgggaacatttgac
tcatctggggcttttctctcattaaagaaggttcagaaggagccaatccccgaggaacag
gaaatggatttccaacctgtggaagaaggtgaggaaccttctgactctgaaggggatcag
ggtgaagaagccaaagagcttgaaaagactaccaagagggagggggataaaagagataca
ataacagcagaggcagcagaagaagcagtcagagcaccttcaccgtctacccagtcaggt
actccaccaaaactccagccacaagaaccactacaggccagtctatttgagaggaaggaa
gagtgtgtcccagaacgaatagaaaaaatggaagataaagagaatcaaatggtgaatact
ccgccatccaaagtgcccagtagaggagaagatctgactcctgctattcaacctttgcca
cagatctctccagctacagtttctcctgttcatctttctcctcctctttccaatacaaat
cctgctctaaagccagttcagacatcagtctcagctgctccgggcatgggaaacattctt
gctgatccagatgatgaagagggtctcaaacacttagagcagcaggcagagaaaatggtg
gcatatctgcaggacagtgcattggatgatgagagactagcagcaaaacttcaagagcac
agagcaaagggctcctccatgccattactccatgaagccatgcagaagtggtactacaag
gatcctcaaggagaaattcagggtcccttcagtaaccaggagatggcagagtggttccag
gctgggtattttactatgtccctgttagtaaagagagcatgtgatgagaatttccagcca
cttggagacatcatgaaaatgtggggcagggttcccttcactccaggtccagcaccacct
ccacatctgggtgagatggaccaggagcgactaactagacaacaagaacttacggccctg
taccaaatgcagcacctccagtaccagcagtttttgatacaacaacaatatgcacaggtg
ttggcacagcagcaaaaagcagccctctcatcccagcagcagcagcaactggctctcctc
ttgcaacagttccaggccctgaagatgagaatatctgaacagaacctgatgccgtctgta
acaaggtctgtgtcagtgccggatgctagctcaatttgggagcttcagtccacagcctct
cagcccacagtctgggaaggaagcagtgtctgggatctccccattgatactgcagctcag
ggacctgctctagaacaacttcagcagctcgagaaggccaaagctgcgaagctagagcag
gagaggagagaagtggaaatgagggccaaacgagaagaggaagagagaaaaagacaggag
gaacttcgaagacagcaagaggagctacttaggaggcaacaggaggaagagaggaaacga
cgagaagaggaggagctggcacgaagaaagcaggaagaagccctgaggcggcagagagag
caggaaattgcactaagacgacagcgggaggaagaggaacgacaacaacaggaggaagca
cttagaagattggaagagaggagaagagaagaagaggaaagacgacagcgagaagagttg
cttcgtaaacaggaagaggaggctgccaaatgggcacgtgaagaggaggaggcccagcgt
cgactagaggaaaaccggttgcacatggaagaggaggcagccagactacggctcgaagag
gaagagcgaaagcgcaaggagctggaactccagcgccagaaggaattattaagacaaagg
cagcagcaacaggaggctctgcgccggttgcagcagcagcagcagcagcagcaacttgca
cagatgaagctcccttcttcttcaacatggggccagcaatccagctcaggagcgtgtcag
tctcagaccacattatcattggcagaaatccaaaagcttgaagaagagcgagaacgtcag
cttcgagaggagcaaagacgtcagcagcgtgaactgatgaaagccctccagcagcaacag
caacagcaacagcagcaacaaaaaatgtcaggttggggtaatgtcaccaagccaacaggt
gctaccaaatctctcttggaaatacagcaggaagaggcgaggcagatgcagaagcagcag
cagcagcagcaacagcagccgaacagagtccgcaatactacgcattctaacctgcacagc
agcattgggaattcagtatggggctctctaaacagtaatcccaccacccagtgggcatct
gatctagtcagcagtatctggagcagtgctgacaccaaaaactcaaatatggggttctgg
gatgatgcagtgaaggaaatggggcctcgtaactcaaccaataaaaacaagagcaatgcc
agcctcagtaaatctataggaattacgagcagacagaacaagaaggttgaagaagaggag
aagctgctgaagttgtttcaaggggttaataaagcccaggatggattcactcagtggtgt
gaacagatgctacatgcactcaacacagcaaacaccttggatgttcccacgtttgtttct
ttcctgaaggaagtggagtctccatacgaggtccacgattacatcagagcctaccttgga
gatacccctgaggccaaggaatttgccaagcagtttctagagcgccgtgccaaacaaaaa
gccagtcagcagcagcagcaggattcagtgtgggggatgaaccatagcgcactgcattcc
gtctttcagaccaatcagagcaacaaccagcaatccaactttgaagctgtgcagagtagc
aagaaaaagaagaaacagaaaatggttcgagcagatcccagtttgttaggattttcagtg
aatgcctcatcagagcggctcaatatgggagaaatagagactttggaagactactga
DBGET
integrated database retrieval system
