Trachemys scripta elegans (red-eared slider): 117883390
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Entry
117883390 CDS
T07347
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-4
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04080
Neuroactive ligand-receptor interaction
tst04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117883390
04082 Neuroactive ligand signaling
117883390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117883390
Ion channels [BR:
tst04040
]
Ligand-gated channels
GABA-A
117883390
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117883390
NCBI-ProteinID:
XP_034638548
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All DBs
Position
9:40048258..40147973
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AA seq
488 aa
AA seq
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MWRFQADRLSAFVSALAALCLACCAQSQSTGNISVVKEIVDKLLKGYDVRLRPDFGGNPV
TVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYSDLPLNLTLDNRVADQLWLPDT
YFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIES
YGYTVDDIVFFWQGNNSAVTGMEMLELPQFTIIEQRLVTREVVFTTGSYLRLSLSFRIKR
NIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIP
YVKAIDVYLMGCFVFVFLALLEYAFVNYIFFGRGPRQQKKQSERLSKANNERQRYEEKRM
REQVDPYGNILLSTLEMNNELLAMDMMSSVGDSRNSVLSFEGSGIQFRKQLASRDGFGHH
PTLDRHVPLTHHAAVRNRANCRLRRRSSKLKLKIPDLADVSTIDKWSRIIFPITFGFFNL
IYWLYYVN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtggagatttcaggcagacagattgagtgcatttgtctctgctttagcagcgctttgt
ctcgcctgctgtgcgcaaagccaatccactgggaatatttctgtggtgaaagagattgtg
gacaaattgctgaaggggtatgacgtccgcctcagacccgacttcggaggtaaccctgtt
acagtgggaatgagcatccatatctccagcattgaccagatttcagaagtcaacatggac
tacaccatcaccatgtatttccagcagagctggcgggacaaacgtctagcgtacagtgac
cttcctctgaacctgaccctggacaaccgggtggctgaccagttgtggcttcctgacacc
tatttcctgaatgacaagaagtccttcctgcatggggtgacagtgaagaaccgcatgatt
cggctccatccagatgggacagtgctgtatggcttgagaatcaccaccacagctgcttgc
atgatggatctgaggagataccctttggaccagcagaactgcacgctagaaattgagagc
tatggctacacagtcgatgacattgtgtttttctggcaaggaaacaactcggctgtcaca
gggatggagatgctggagctgccccaattcaccatcatcgagcagagactggtcaccaga
gaagtggtcttcaccacaggctcttatctccgcttatccctgagtttccggatcaagagg
aacatcggttacttcatcctccagacttacatgccttccatcctcatcaccatcctgtcc
tgggtctccttctggatcaattatgatgcctctgctgcccgggtggcattgggggtcacc
acggtgctcacgatgaccaccatcaacacccacttgcgggagaccctcccaaagatccca
tacgtcaaggccatcgacgtctatctcatgggctgcttcgtcttcgtgttcctggcgctc
ctggaatatgcctttgtcaattacattttctttgggcgaggccctcgccagcagaagaag
cagagtgagcggctcagcaaggcaaacaatgagcgccaacgatatgaggagaagaggatg
agggagcaggttgacccttatggcaacatcctcctcagcaccctggagatgaacaacgag
ctgctggccatggacatgatgagcagcgtcggcgactctcgaaactctgtcctgtccttc
gaaggctcaggaatccagttccgcaagcagctggcctctcgggatggctttggccaccac
cccaccttagaccgccatgtcccactgacccaccatgctgctgtccgcaaccgtgccaac
tgccgcctccgccggcggtcctctaagctgaagctcaaaatcccggacctggcagacgtc
agcaccattgacaagtggtcacggatcatttttccaatcacctttggattcttcaacctc
atttactggttgtactatgtaaattga
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