Trachemys scripta elegans (red-eared slider): 117883527
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Entry
117883527 CDS
T07347
Symbol
ARIH1
Name
(RefSeq) E3 ubiquitin-protein ligase ARIH1 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117883527 (ARIH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117883527 (ARIH1)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117883527 (ARIH1)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117883527 (ARIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
ARI1_UBAl
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_14
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
117883527
NCBI-ProteinID:
XP_034638762
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All DBs
Position
10:complement(42943717..43068948)
Genome browser
AA seq
516 aa
AA seq
DB search
MDSDEGYNYEFDEDEECSEDSGAEEDEDEDDEDDEPDDDNLDLGEVELVEPGLGVGGERD
GLLCGETGGLGPGGGSGLGGGPGPGGGGGGHEQEEDYRYEVLTAEQILQHMVECIREVNE
VIQNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVINPSKKSRTRQMNTRSSAQ
DMPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDD
NTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQ
FCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC
RNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQEELTQRSRAALQRYLFYC
NRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVF
AFYLKKNNQSIIFEVGKTHLYSLLQASNITGYHGGT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgagggctacaattacgagttcgacgaggacgaggagtgcagcgaggac
agtggcgccgaggaggacgaggacgaggacgacgaggacgacgagcccgacgacgataac
ctggacctgggcgaggtggagctggtggagcccgggctgggcgtaggaggcgagcgcgac
gggctgctgtgcggggagacgggcgggctgggccccggcggcggcagcgggctgggcggc
gggccgggccccggcgggggcggtggcggccacgagcaggaggaggactatcgctacgag
gtgctgacggccgagcagatcctgcagcacatggtggagtgtatccgggaggtcaacgag
gtcatccagaatccagcaactatcaccagaatactacttagccatttcaactgggataaa
gagaagctgatggaaaggtattttgatggcaacttggagaagctttttgctgagtgtcat
gtaattaacccaagtaaaaagtctcgaacacgtcagatgaacacaaggtcatcagcccag
gacatgccttgtcagatctgctatctgaactaccccaactcgtactttactggcctagag
tgtggacataagttctgtatgcagtgctggagtgaatatttaactaccaaaataatggag
gaaggcatgggacagactatttcgtgccctgctcatggctgtgatatcttagttgacgac
aatacagttatgcgtctgatcacagattcaaaggttaaattaaagtaccagcatttaata
actaatagttttgtagagtgtaatcgactgttaaaatggtgtcctgccccagactgccac
catgttgttaaagttcagtatcctgatgctaaacctgttcgctgcaaatgtggacgtcag
ttttgctttaactgcggtgaaaattggcatgatcctgttaagtgcaagtggttaaagaag
tggattaagaagtgtgatgatgacagtgaaacttccaattggattgcagcaaacacaaag
gaatgcccaaaatgccatgtgaccatcgaaaaagatggaggctgcaatcacatggtctgt
cggaaccagaactgtaaagcagagttctgctgggtgtgtcttggcccttgggagccacat
ggatctgcctggtacaactgtaatcgctacaatgaggatgatgcaaaggcagcaagagat
gcacaggaggaattaacacagcgatccagagcagccctgcagaggtacctgttctactgc
aaccgctatatgaaccacatgcagagcctgcgctttgagcacaaactctatgctcaggtg
aagcagaaaatggaggagatgcagcagcacaacatgtcgtggattgaggtgcagttcctg
aagaaagcagttgatgtcctctgccagtgtcgtgccacactcatgtacacttatgtcttt
gccttctacctcaaaaagaataatcagtccattatcttcgaggtagggaaaacacatttg
tactccttacttcaagcaagcaacattactgggtaccacggggggacttga
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