Trachemys scripta elegans (red-eared slider): 117883531
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Entry
117883531 CDS
T07347
Symbol
TMC7
Name
(RefSeq) transmembrane channel-like protein 7 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117883531 (TMC7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117883531 (TMC7)
03037 Cilium and associated proteins [BR:
tst03037
]
117883531 (TMC7)
Transporters [BR:
tst02000
]
Other transporters
Pores ion channels [TC:
1
]
117883531 (TMC7)
Cilium and associated proteins [BR:
tst03037
]
Other cilia and associated proteins
Stereociliary proteins
117883531 (TMC7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF6329
TMEM252
Motif
Other DBs
NCBI-GeneID:
117883531
NCBI-ProteinID:
XP_034638771
LinkDB
All DBs
Position
10:17354348..17378820
Genome browser
AA seq
725 aa
AA seq
DB search
MSEPLGPGARGPPDSPDDEEVFLPDANYTLPSVTFLQELPSYQSILRRRTSAGGTQDRRQ
NNHGFARPPAAEKRNLVERTEVENEAVVRSIREYALTIPEKRRLRDIQEANVKYLSGWDQ
WKQTRNKSWKKFLDETKELSSYLELWRNDIHNIEGKFGTGIKSYFSFLRFLVLLNFIIFV
LMFSFITLPSIISQYGVLNSSYDKLLPPKGIEPQCTIYTISDTKGLVYFYTYIIDLLSGT
GFLEMTSLFYGYYRIDTVLFNNIRYNVPLAYLLTTLVYLSLSLLWIVKRSVEGFKQSFVR
EEDPFQSYCNKIFAGWDFCITDLNASQLKHNSLKYELKMDLEEERLRQKKACRTTEEKLR
IYCLRLFLNIFVLALLSGCFYSIYRATIYSQDIISSVSSKMTFEGNLFVQYLPSMVITLA
NFIAPLFFSYLIRFEEYSPAFEIRLTLMRCVFVRLANIGVLLFSLRNRILCDRKKCEACG
YNYELYPCWESRVGQEMYKLMIFDFIIIFAVAVFVDFPRKLLVTYCSYKPIQRCGLQKFK
IPENVLEMVYGQTICWIGAFYSPLLPAIATVKYFIVFYIKKISLMHTCKPSKRSVRASSS
NFFFLVVLLIGLILAFIPLGLSMTRIPSSKACGPFVNFNNSWDVVPHTIRGFPTALQKVL
NGIASEAFAVPFLMVICLIMVYFIALAGAHKRVVDQLREQLVMVRSNTMSPFLPPLPASF
SVVLH
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcccctggggccgggggcccgggggccgcccgacagccccgacgatgaagaa
gtcttccttcctgatgcaaattatacattgccatctgttacctttctgcaagaattgcct
agttatcagtccattttgaggcggagaacttctgctggaggaacacaagatagacgacaa
aacaatcatggctttgcgagaccccctgctgcagagaaaagaaatcttgtagaaagaaca
gaagtggaaaatgaggctgtggttcgatcaataagagagtatgcattaactattccggag
aagagaagactaagggacatccaggaggctaatgtaaaatatttatctggatgggatcag
tggaagcagaccaggaataaatcatggaaaaaattcctagatgaaaccaaggagctgtca
tcttacttggaactttggagaaatgacattcataacattgaggggaagtttggcactggt
atcaagtcctatttctccttcctgcgtttcctggtcctgttaaattttataatctttgtt
ctgatgttcagttttataacacttccaagcatcatttctcaatacggagttctcaacagt
agctatgataaactgcttcctccaaaaggcatagagccgcaatgcacaatttatacaatt
agtgatactaaaggactcgtttacttctatacttacataatagatctgctgtctggcacg
ggtttccttgaaatgacgagtctgttttatggatattacagaatagatacggtacttttc
aataacattagatacaatgtaccacttgcatacttgctgactacacttgtgtatctctca
ttaagtcttctctggatagtgaaaaggtccgtggaaggatttaaacaaagctttgtacgt
gaggaagatccatttcagagttattgcaacaaaatctttgcaggctgggacttctgcatt
acagacctgaatgcttcacagctaaaacataatagtttaaaatatgaactaaaaatggac
ttggaggaagaaagactaaggcaaaaaaaagcttgcaggacaacagaagaaaagctgcgc
atctactgtctaagactatttttaaatatctttgttcttgcacttttgtcaggatgcttt
tactctatctatagagcaacaatctactcacaagacattatttccagtgtcagcagcaag
atgacgtttgagggtaatctcttcgtgcaatacttgccttctatggtgatcaccctggcc
aactttattgcgcctctgtttttttcatatctaatcagatttgaagagtattcaccagcc
tttgagatcaggttaacacttatgcggtgtgtctttgtgcggctggccaacattggtgtt
ctcttgttttcactgcggaatcgaatcctatgtgataggaaaaagtgtgaggcctgtgga
tacaattacgaactctacccatgctgggaatctcgagttgggcaggagatgtataagctg
atgatttttgatttcataataatttttgctgtggcagtgtttgttgactttcctagaaag
ttgttagttacctattgctcttataaaccgattcagaggtgcgggctgcagaaatttaaa
attcctgaaaatgtactggaaatggtatacgggcagacaatctgctggattggagccttt
tattcaccacttcttcctgctatagcaactgtaaaatattttattgtcttttacataaaa
aagataagtttgatgcatacgtgtaaaccttcaaagaggtctgtcagagcatcaagctct
aatttcttcttcctggtggtgctgttgattgggcttatattggcttttattcctttggga
ctcagcatgacacgcatcccctcctctaaagcatgtgggccattcgttaattttaacaat
tcgtgggatgttgttccacatacaatacgagggtttccaacagctctgcagaaggtcctt
aatggtatagcttcagaagcatttgcagtgcctttccttatggttatctgcctcattatg
gtctatttcattgccttggctggagcacataaacgagttgttgatcaactcagggaacaa
ttggttatggtaagatctaatacaatgtctccatttctacctcccctccccgcaagtttt
tcagttgtgttgcactag
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integrated database retrieval system
