Trachemys scripta elegans (red-eared slider): 117883535
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Entry
117883535 CDS
T07347
Symbol
RFX7
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117883535 (RFX7)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Other basic domains
RF-X
117883535 (RFX7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
AadA_C
Motif
Other DBs
NCBI-GeneID:
117883535
NCBI-ProteinID:
XP_034638779
LinkDB
All DBs
Position
10:60494603..60601715
Genome browser
AA seq
1470 aa
AA seq
DB search
MMAEEQQPDPQQPPPPQLPGTPAPGGALPALVPGLQGTEANALQHKIKNSICKTVQSKVD
CILQEVEKFTDLEKLYLYLQLPSGPSNGEKSDQISMSSSRAQQMHAFSWIRNTLEEHPET
SLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRGKSKYCYSGLRKK
AFVHMPTLPNLGFHKTGDGLDGSDPSGQLQSADEEVVSAACRLVCEWAQKVLSQPFDSVL
DLARFLVKSHYIGTKSMAALTVMAGAPAGIKGIPQPSAFIPTAESNSFQPQVKTLPSPVD
AKQQLQRKIQKKQQEQKLQSPLPGESPAKKTEGATANGVTSISNGSPAILSPQPIGIVVA
AVPSPIPVPRTRQLVTSPSPMGSSDGKVLPLNVQVVTQHMQSVKQSPKTPQNVPASPVGD
RSARHRYPQILPKPANTSALTIRSPTTVLFTSSPIKTVVPAPHVNSLNVVKMTAISLAPS
SSSVPVKHTTSLNSSTGAMEESRTVPQIKNGSVVSLQSPGSKTSSVVATPAVEIKMEPEA
LLDENPIQCQENSDVSKAIKGAPGLPAAQRNHFEGTTLKASTESISEVKTVKGCDQRAEG
ARTKYKARPKEIIPVSSAGNNQSTLTLSVATQNFSNPSISSPPSGDSTIKDKTCTKSPRK
RLPSTLQESQVPPVKKPLVGQLSAGSMEGQKGSSVKKVQKVVSLTRNDSTTALAQVPSKV
TIKVNSTASTHLVTNCPLNSNVINTSDSTLGQQLTASSPDIKVKLEGNLFILENDSKSDG
SFNPNPWQHITKTSDFTSVNSEQQQDISVMTIAGQSDSNDLQESVWEPVHCEGIQQDTYS
QQLQSQIQESALGQIQAQSSNQLPLPLQSELKEFEHTVPQSNENFFSFDDDLTQDSIVEE
LVLMEEQMSMNSSHPYGSCLGMALQNQTAAQGAPMSSHPSNTHFYHSIHNNGTPIHTPTP
TPTPTPTPTPTPTPTSEMIAGSQSVSRESPCSRLAQTTPVDSALGSSRHTPIGTPHSNCS
SSVPPSPVECRNPFAFTPISSSMAYHDASIVSSSPVKPMQRPMATHPDKTKLEWMNNGYS
GVTNSSVSNHGILPSYQELVEDRFRKPHAFAVPGQSYQSQSRHHDTHFGRVTPVSPVSHQ
GSSVNSTNKQEGFAVPAPLDNKGTSSSLNNSFRCRSVSPAVHRQRNLSGSTVYPVSNIPR
SNLTPFGSPVTPEVHNVFTNIHADTSANNIAQRSQSVPLTVMMQTAFPSLQKQTNTKKIT
NVLLSKLDSDGDDAVRGLGMNNMPSNYTARMNLTQILETSTTFPSANPQNMINSSTSVYE
FQTPSYLTKNSSTDQISFSSGDNQAQSEIGEQQLDFSSTVKDFLGEDNLQTNQQLVNQVV
SDLNNVASVFSSDIRLSSDLSGSINDLNTLDTNLLFDPGRQQGQDDDATLEELKNDPLFQ
QICNESINSMTTSGFEWMESKDHPAVEMLG
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagaagaacagcaacctgatccccagcagccgccgccgccgcagctccccggc
acccccgcgccagggggggctttgccagctctggtgcccgggctgcaagggacggaagcc
aacgcgctgcaacacaaaatcaagaactccatctgcaaaactgtacaatctaaggtggac
tgcattttgcaagaagttgagaagtttacagacctagagaaactctacctctaccttcaa
ctgccttccggtcccagcaatggagagaaaagcgatcagatctcgatgtcatcaagccgt
gcgcagcaaatgcatgcattttcttggattcggaataccttggaggagcacccagagacg
tcccttcccaaacaggaagtttatgatgagtacaagagctattgtgacaatcttggctac
catcctttaagtgctgctgactttggaaagatcatgaaaaatgtctttccaaatatgaag
gcccgccgtctgggcacaagaggcaaatcaaaatattgctacagtggactgaggaagaaa
gcttttgtgcatatgccaacactgcccaaccttggcttccataaaactggagatgggttg
gatgggtcagatccatcagggcagctacaaagtgctgatgaggaagttgtgtcggccgcc
tgtcgacttgtgtgcgaatgggcccagaaagtcctaagccagccatttgattcagtcttg
gatttagctcgtttccttgtcaaaagtcactacatcggcaccaaatcaatggcagcttta
acagtaatggcaggggcaccagcaggaataaaagggatccctcaaccctctgcttttata
cccacggctgaaagtaattcttttcagcctcaagtgaaaactcttccatcaccagttgat
gccaagcagcagctacagcgtaagatccagaagaagcaacaggaacagaaactgcagtct
cctttgccaggagagtctccagcaaagaaaacagaaggagctacagccaatggagtaaca
agtatttctaatggaagtcctgcaatcttgtctcctcaacctatcggtatcgtagtggca
gctgtacccagccccataccggtaccgaggaccagacagctggtgacatctccaagtccc
atgggctcctctgatggcaaggttcttccgctcaatgttcaggtggtcactcagcacatg
cagtcagtcaaacagtcaccaaagactcctcagaatgttccagccagtccagttggtgac
cgttccgcccggcatcgttacccacagatcttacctaagccagcaaacaccagtgctctc
accatccgctcgcctactacggtgcttttcaccagtagcccaatcaagacagttgtgcca
gctccacatgtaaactccttaaacgtggtaaaaatgacagcaatatctcttgcccctagc
agcagtagtgtacccgtcaaacacactacttcattgaacagtagtacaggagcaatggaa
gaatcgaggactgttcctcagattaaaaatgggtctgttgtttcacttcagtctccagga
tccaagacaagcagtgttgtagctacacctgcagttgagatcaaaatggaaccagaagca
ttactggatgagaacccaatacagtgccaagagaattctgatgtgtctaaagctataaaa
ggagcaccaggcctgcctgctgctcagaggaatcattttgagggtacaaccttgaaagct
tcaactgagagcatcagtgaagtgaaaacagttaagggctgtgatcagagagctgaagga
gcaaggaccaaatataaagcccgacctaaagaaatcataccagtttcttcagcaggcaat
aatcaaagcactcttactctctcagttgccactcaaaacttctccaaccccagcatcagt
tcacctcctagtggtgattctactattaaagataaaacatgcactaaaagtccaaggaag
cgactaccttctacgcttcaggagtcccaggtaccacctgtaaagaaaccacttgtgggg
cagctttcagcaggtagcatggaaggtcaaaaaggaagcagtgttaagaaggttcagaag
gttgtatcattaactagaaatgacagtactacagcacttgctcaagttcctagcaaggtc
actataaaagtaaattctacagcttcaacacacttagtgacaaactgtccattgaattcc
aatgttataaataccagtgattccactttgggacagcagctcacagcctcatctccagat
ataaaagtaaaattggaaggaaatttgtttatcttagaaaatgattcaaaatctgatggc
agctttaatccaaatccatggcagcatatcactaaaacctctgactttacatctgtgaac
tctgaacagcagcaagatatcagtgttatgactattgcaggacagtctgactctaatgat
ttacaggaatctgtatgggagccagtgcactgtgaaggaatacaacaggatacatacagc
cagcagttacagagccagatccaagaatcagctttgggtcaaatacaagcacagtcctca
aatcaattaccgttacctctgcagtctgagctaaaagaattcgaacatacagtccctcag
tccaacgaaaacttcttttcatttgatgatgaccttacacaggacagcattgtggaggaa
ctggtgctcatggaggagcaaatgtcaatgaacagttctcatccttatggtagttgtctg
ggaatggcactgcagaatcagacagcagctcaaggagctccaatgtcatctcatccaagc
aatacgcacttctaccattcaatccacaacaatggcactccaattcacactcccacacct
accccgactcccacacctaccccgactccgaccccaacacccacgtcagaaatgattgct
ggatctcagagtgtgtcacgagagagcccgtgctcacgactggctcagactactcctgta
gacagtgctctgggaagtagccggcatacacccattggcacaccacattcaaactgcagc
agcagtgtccctcctagtcctgtggaatgcagaaatccttttgcatttactccaataagc
tccagtatggcatatcatgatgccagcattgtctcgagtagccctgtgaaaccaatgcag
cgacctatggctactcaccctgataaaaccaaacttgagtggatgaataacgggtacagt
ggagtcactaattcatcagtttcaaatcatggcattcttccaagctatcaggagctagtg
gaagaccgtttcaggaaacctcatgcttttgcagttcctggccagtcatatcagtctcag
tcccggcaccacgatactcactttggtcgtgtgactcctgtgtcacctgtatcacatcag
ggatcctctgtaaatagcaccaacaagcaggaaggctttgctgttcctgctcctcttgac
aacaaaggaacaagttcctctctcaataacagtttcagatgccggagtgtaagccctgct
gtccatcgccaacgtaatcttagtggaagcactgtctatccagtttctaatataccacgc
tctaacttgacccctttcggaagtccagtgacacctgaagttcacaatgtgttcacaaat
attcatgctgacactagtgccaataatatagctcaaaggagtcagtcagtccctttgact
gtcatgatgcagacagccttcccctctcttcagaaacaaacaaacactaaaaaaataaca
aatgtgttgttaagcaaacttgattctgatggcgatgatgcagtgagaggtttgggaatg
aacaacatgccttcaaattacacagcgaggatgaatctcactcagattttagaaacatcc
accacttttcctagtgccaacccgcaaaatatgatcaattccagcacttcagtttatgaa
ttccaaacaccaagttacctcacaaaaaacagcagcaccgatcagatcagtttttcttct
ggagataaccaagcacaatcagaaattggagaacagcaattagatttcagcagcactgta
aaagactttttaggggaggacaatctgcaaaccaaccagcagctggtgaatcaggtggtg
tcagatctcaataacgttgcatctgtcttttccagcgacatcaggttgtcttccgacctc
tcaggcagcattaatgatctgaatactttagatacaaatctactgtttgatccaggtcgt
cagcagggacaagacgacgatgctacactggaggaattaaagaatgaccccttgtttcaa
caaatctgcaatgaatccattaactcaatgactacatcaggttttgagtggatggagagt
aaggatcatcctgctgttgaaatgttgggttaa
DBGET
integrated database retrieval system
