Trachemys scripta elegans (red-eared slider): 117883536
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Entry
117883536 CDS
T07347
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117883536 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117883536 (MYO5A)
04131 Membrane trafficking [BR:
tst04131
]
117883536 (MYO5A)
03029 Mitochondrial biogenesis [BR:
tst03029
]
117883536 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117883536 (MYO5A)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117883536 (MYO5A)
mRNA cycle factors
P-body specific factors
117883536 (MYO5A)
Membrane trafficking [BR:
tst04131
]
Others
Actin-binding proteins
Myosins
117883536 (MYO5A)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117883536 (MYO5A)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117883536 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
TPR_MLP1_2
Myosin_N
AAA_16
AAA_22
MC7
Motif
Other DBs
NCBI-GeneID:
117883536
NCBI-ProteinID:
XP_034638780
LinkDB
All DBs
Position
10:62763612..62944909
Genome browser
AA seq
1855 aa
AA seq
DB search
MAVSELYTKYARVWIPDPEEVWKSAELLKDYKQGDKVIQLRLEEGKELEYCLDPKTKELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGID
DAKEMVHTRQACNLLGINDSHQMGIFRILAGILHLGNVGFTSRDADSCTIPHKHEPLTIF
CDLMGVEYQEMSHWLCHRKLATASETYIKPISKLQAINARDALAKHIYAKLFNWIVDHVN
KALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKLGILDLLDEECKMPKGSDDSWAQKLYNTHLKKCALFEK
PRMSNKAFIIQHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKMLSELFQDEEKAL
SPTSATPSGRTLLSRTAVKPAKAKPGQASKEHKKTVGHQFRNSLHLLMETLNATTPHYVR
CIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDV
LSDRKQTCKNLLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRVACIRIQKTIRG
WLMRKKYLRMRKAAITIQRYVRGYQARCYAKFLRRTRAAILIQKFQRMYVVRKRYHLMRA
ATIVLQSLLRGYIARNKYQRMLREHKAIIIQKHVRGWLARVRYHRSLKAIVYLQCCYRRM
MAKRELKKLKIEARSVERYKKLNIGMENKIMQLQRKVDEQNKDYKSLLEKLTNLETTYNT
ETEKLRGDVERLRMSEEEAKNATNRVNMLQEEITKLRKELHKTQSEKKTIEEWADKYKQE
TEQLVSELKEQNTSLKKEKEELNRRIHDQAKEMTETMEKKLIEETKQLELDLNDERLRYQ
NLLNEFSRLEERYEDLKDEVNLMVSIPKPGHKRTDSTHSSNESEYTFSSEITETEDLPLR
MEEPSEKKAPLDMSLFLKLQKRVTELEQEKQSLQDELDRKEEQALRTKTREEEERPPVRG
AELEYESLKRQELESENKKLKNELNELQKALLEKSSPVVTAPGAPAYRVLLDQLTSVSEE
LDVRKEEVLILRSQLVSQKEAIQPKEDKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKET
NRLLESQLQSQKKSHDNELEALRGEIQSLKEENNRQQQLLAQNLQLPPEARIEASLQHEI
TRLTNENLFYEELYADDPMKYQSYRISLYKRMIDLMEQLEKQDKTVRKLKKQLKVFAKKI
GELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGMLEYKKDDEPKLVKNLILDLKPRGV
AVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTINGIKKVLKKRGDDFETVSFWLSN
TCRFLHCLKQYSGEEGFMKHNTPRQNEHCLTNFDLAEYRQVLSDLAIQIYQQLVRVLENI
LQPMIVSGMLEHETIQGVSGVKPPGLRKRTSSIADEGTYTLDSIIRQLNTFHSVMCQHGM
DPELIKQVVKQTFYITGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMNSGA
KETLEPLIQAAQLLQVKKKTDEDAEAICSMCNALTTAQIVKVLNLYTPVNEFEERVSISF
IRTIQMRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLALETIQIPASLGLAFISRV
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccgagctctacacaaagtatgccagggtttggatccctgatccagaggaa
gtctggaagtcagcagaacttctcaaagattataaacaaggagataaagtcatccagctt
cgactcgaagagggaaaggaattagaatattgccttgatcctaagaccaaggaactgcct
cccttacgaaaccctgacatacttgttggtgaaaatgatctcacagcactcagttatctc
catgaacctgctgttctacacaacctcaaagttcgctttattgattcaaaactcatttat
acctattgcggtatcgtcttagtagccataaatccttatgagcagctgcctatctatggc
gaagatatcatcaatgcatacagtggtcagaatatgggggatatggatccacacatcttt
gctgtggctgaagaagcatataaacagatggccagagatgaacggaatcagtcaatcatt
gtaagtggggaatctggagcaggaaagactgtctctgctaagtatgccatgagatacttt
gccactgtaagtggttctgccagtgaagctaatgttgaagagaaagtactggcttccaac
cctatcatggagtccatcggaaatgccaaaaccacaaggaatgacaacagtagtcgtttt
gggaagtacattgaaattggtttcgataagaggtaccgaatcattggtgctaacatgaga
acttacctcttagaaaaatcaagagtggtatttcaggcagaagaggagagaaattatcac
attttctaccagctctgtgcctctgcagcattacctgagtttaaaacactgcgattaggg
aatgcaaattactttcactatacgaagcaaggaggtagtccagtgattgacggcattgat
gatgctaaggaaatggtacacaccagacaggcctgcaatttgctagggattaatgattcc
caccagatgggaatctttcgaatccttgctgggatccttcacctgggcaacgtggggttt
acctctcgggatgctgacagctgcacgatcccccacaaacatgaacccctcaccatcttc
tgtgacctcatgggtgtggagtaccaagagatgtcccactggctttgccataggaagctt
gctactgcctctgagacctacatcaaaccaatttccaaactgcaggccatcaatgccaga
gatgctcttgccaaacatatctatgctaaactctttaactggattgttgatcatgtgaac
aaagctctgcattctactgtaaagcagcattctttcattggcgtattggacatttacggg
ttcgagacatttgagataaacagctttgaacagttttgtataaactatgccaatgaaaaa
ctgcagcaacagttcaatatgcatgtctttaagctggaacaggaggaatatatgaaggaa
caaattccatggaccttgattgatttctatgacaatcagccttgtattaatctcatagag
gccaaattgggcattttggatctgctagatgaggaatgtaagatgcctaaaggatcagat
gactcttgggcccagaaattgtataatacacatttgaagaaatgtgcactcttcgaaaaa
ccacgtatgtcaaacaaagcttttatcatacaacactttgctgacaaggtggaatatcag
tgtgaaggctttctggaaaagaacaaagacacagtttatgaagaacaaatcaaggtccta
aaatcaagtaagaagtttaagatgctgtcagagttgtttcaggatgaggagaaggccctt
agtcccacctcagcaaccccttcaggtcgcacgctgctgtctcgcactgctgtaaaaccc
gccaaggccaaaccaggccaagcaagcaaggaacataagaaaactgtgggacatcagttt
cggaactctcttcatctgctgatggaaacccttaatgctacaactccacactacgtgcgt
tgtattaagcccaatgacttcaagtttccattcacgtttgatgaaaagcgggcagttcag
cagctcagagcttgtggtgttctggaaactatccggatcagcgcagctggcttcccctca
aggtggacgtatcaagagttcttcagccgctaccgtgtcctgatgaagcaaaaagatgtc
cttagtgacagaaaacagacatgcaaaaatttgttggagaagctgattctggacaaggat
aagtaccagtttggtaagacaaaaatattttttcgggctggtcaagtagcctatctggaa
aaaataagagcagataaactgagagttgcctgcatccgcatccagaagacaatccgaggg
tggctgatgcgaaagaagtacctgcgcatgaggaaagcagccatcaccattcagagatat
gtcagagggtaccaggcacgatgctatgccaaattcttgcgaagaaccagggctgccatc
ctaattcagaagttccagcgcatgtatgtggttcgcaaaagataccatctcatgcgagct
gccactattgtgcttcagtcacttttacgaggttacatagcaaggaacaaataccagagg
atgcttcgagagcacaaggccattattattcagaagcatgtgcggggctggctggctcgt
gtgcgctaccataggagcttgaaggcaattgtgtacctgcaatgctgctacaggcgtatg
atggccaaaagggaactgaagaagctgaagatagaggcgcgctctgtggaacggtacaag
aaactcaatattgggatggagaacaagatcatgcagctgcagcgtaaagttgatgagcag
aacaaagactacaaatccctgctggagaaactaactaacctggaaaccacgtacaacaca
gagaccgagaagctgcggggtgatgtggaaaggcttcgcatgagtgaggaggaggctaag
aatgccacgaaccgtgtgaatatgctccaagaggagatcaccaagcttcgaaaggagctg
cacaaaacacagtctgagaagaagacaattgaggaatgggcagacaaatacaaacaggaa
acagagcagttggtatcagaactgaaagagcaaaacacatcactgaaaaaggaaaaggag
gagctgaatcgtcgcatccatgatcaggccaaggagatgacagagaccatggagaagaag
cttattgaggaaacgaaacagctggagttagatctgaatgatgaaaggttaaggtatcag
aatctgctgaatgagttcagccgcttagaggagcgctatgaggatctcaaggatgaggtg
aatctgatggtgagcatccccaagcctgggcacaaaagaacggattccacacacagcagc
aatgaatctgaatatacatttagctctgagattacagagacagaagacttaccactgaga
atggaggagccaagtgagaaaaaggcgccgctggacatgtctctgttcctcaaactgcag
aaacgggttacagagctggagcaggaaaagcaatccttgcaggatgaactggacaggaag
gaggaacaggctctccgcaccaagaccagggaggaggaggaaaggcccccagtgagaggc
gcagaactagagtatgagtcacttaagcgtcaagaacttgaatctgagaacaagaagctg
aagaatgagctgaatgagctgcagaaggctcttttggagaagagctctccagtggtgacg
gctcctggtgcccctgcctatagagttctcctggatcagctgacctcagtaagtgaggaa
ctagatgtacgcaaagaagaagtcctcatcctgaggtctcagctggtgagtcagaaggag
gctattcaacccaaggaggataagaatactatgacagattctacaatcctcttggaggat
gtacagaagatgaaagacaaaggagaaatagcacaggcatatattgggctaaaggaaaca
aacaggctcctagaatctcagcttcagtcccagaaaaagagtcacgacaatgagctggaa
gctctccggggtgagattcagagtttgaaggaggagaataaccgccagcagcagctttta
gcacagaacctgcagctgcccccggaggcccggattgaggccagtctacagcatgagatc
acccggctgactaatgaaaacttgttttatgaggagttatatgcagatgaccccatgaag
tatcagtcgtatcggatttcactttacaaacggatgattgatttaatggagcagcttgaa
aagcaggacaagacagttcgcaagctgaaaaagcagctgaaagtgtttgctaaaaagatt
ggtgaacttgaagtgggccagatggaaaacatttcgcctgggcaaatcattgatgaaccc
atacgtccagttaatattccacggaaagaaaaggacttccaaggaatgttagaatataag
aaggatgatgagccaaaactggtcaagaatcttattttagatctgaaaccacgtggtgta
gcagtcaatctgatcccaggactaccagcatatatattattcatgtgtgtccgccatgct
gattaccttaatgatgatcaaaaagtgagatcattgctgacttccactattaatggcatc
aaaaaagtattgaagaaaagaggtgacgactttgaaacggtctccttctggctatctaac
acctgccgatttttgcactgtctgaagcagtatagtggagaagagggatttatgaagcac
aacacacctcgtcagaatgaacactgcctcaccaattttgacttggctgaatacagacag
gtattgagtgacttggctattcagatctaccagcagctcgtcagagtgttagagaatata
ctgcagccaatgattgtttcaggaatgctggagcatgaaactattcaaggcgtctcaggg
gtaaagccaccagggctgcgaaagagaacgtccagtattgctgatgaagggacctacacg
ctggactctatcattagacagctgaacacattccactcggtaatgtgtcagcatggtatg
gatccggagttgatcaagcaagttgtcaagcaaacgttctacatcactggggcagtaacc
ctgaataacctcctcctgcgcaaggacatgtgctcctggagcaaagggatgcagatacgg
tacaatgtgagtcaacttgaagaatggctacgtgacaaaaatttgatgaatagtggggct
aaagaaacactggagcctctcattcaggctgcacagttgttgcaggtgaaaaagaagacg
gatgaagatgcagaagccatttgttcaatgtgcaatgctctaactactgcacagattgta
aaagttttgaatttgtatactccagttaatgagtttgaagaaagggtctcaatatcattt
atacgtacgatacagatgcgtttacgagacaggaaagactctcctcagctgctaatggat
gctaaacacatctttcctgttacttttccatttaatccatcctcccttgcattagaaacc
attcaaattccagccagcttgggcctagcattcatctcacgtgtctga
DBGET
integrated database retrieval system
