Trachemys scripta elegans (red-eared slider): 117883538
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Entry
117883538 CDS
T07347
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117883538 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117883538 (MYO5C)
04131 Membrane trafficking [BR:
tst04131
]
117883538 (MYO5C)
03029 Mitochondrial biogenesis [BR:
tst03029
]
117883538 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117883538 (MYO5C)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117883538 (MYO5C)
mRNA cycle factors
P-body specific factors
117883538 (MYO5C)
Membrane trafficking [BR:
tst04131
]
Others
Actin-binding proteins
Myosins
117883538 (MYO5C)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117883538 (MYO5C)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117883538 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Csm1_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
117883538
NCBI-ProteinID:
XP_034638786
LinkDB
All DBs
Position
10:62949462..63003730
Genome browser
AA seq
1740 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYRTGDHVLHLLLEDGTELNYPVDPAPLPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSVIVSGESGAGKTVSARYAMRYFAT
VSKSNSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQRHQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASALQPEFKHLKLGHAEEFNYTRMGGNTVIEGVDDR
VDMMETQKTFTLLGLKEDFQMDVFKILAAILHLGNVQMTAVGDEKSSVSLEDKHLNIFCE
LLDLDNDKVAQWLCHRKIITASETVIKPMTKLQALNARDALAKKIYSHLFDFIVERINKA
LHFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWALIDFYDNQPVIDLIEAKMGILELLDEECLLPQGTDENWLQKLYNNYINKNPFFQKPK
MSNTSFIIQHFADKVEYKSEGFLEKNRDTVYEVLIDILRNSKFHLCANFFQDHPVPISPF
RSTITVKSAKTMVKPPNKQFRTTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRVVQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQHELSLSDKKKICKTV
LQRLIQDPNQYQFGRTKIFFRAGQVAYLEKLRSDKLRQACIVIQKNVRSWHQRKKFLRIK
QAAVTIQQYFRGQRAVRQAITATALKQAWAAIIIQKYCRGYIVRKLCQLIRVAAITIQAY
VRGFLARKKFQKMLKEHKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQRLQKKLED
QNKENHGLLERLTHLASTHGNDLDTIQKLELELEKLATQKRTSEEKGKKYKEDTEQKLSK
LEKQNAELQEQKTFLEQKLQEETKEMKDKMDDLTKQLFTDVQQEERQRIILEKKFQNEKQ
DYEKEIESLKGEIKTLREEKIKLQDQIQEEHIIQDDLKLEVGQLKKQAKMIPELQKEIEL
LQTQKMDVEKQVQSQKREMREKVSEVAKQFIESYDVEAVRSRLSIEDLEHLNEDGELWFA
YEGLKKATRVLESQFQSQKENYEKEIEALNFKVEHLSQEIIHLQKLFREENDINDSIRLE
VSRLTSENMMIPDFKQRISELQKQKMDLEQRLQEQAAKTKGKMEEMPNGVHHNLSEEGQR
RTLEDQTEIHTKEEKQIVTIQEIQEANNHLKEQHEIENEVKSKIKQEAFHLTLENMDLEE
ELDMKDRVIKKLQDQIKNLTKTIEKANETHVPAVPKEYIGMMEYRKEDEARIIKNLILDL
KPRGVVVNMIPGLPAYILFMCVRYADYLNDGDMLKSFMSITTNGIKQVIKEHAEDFEILS
FWLSNTYHFLNCLKQYSGEEEFMKQNTPRQNMNCLKHFDLSEYRQILSDLAIRIYHQFIL
VMENNIQPMIVPGMLEHESLQGISGMKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTM
CQNGLDTELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKEKNL
QSSSAKETLEPLSQAAWLLQVKKITDDDAKEIYEHCTSLSAVQIVKILNSYTPIDDFEKR
VSPSFVRKVQAMLNNREDIPQLMLDTKYLFQVTFPYTPSPHALEIIQIPSSFKLGFLTRV
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtacaacagggtttggatccctgacaacgaagaa
gtttggcagtctgctgaaatcacaaagaactacagaacaggagaccatgtgcttcaccta
ctattagaagatggaacggaattgaattaccctgttgatccagcacctttgccacctcta
cgaaatcctgacatacttgttggtgaaaatgacctcacagcccttagctatctccatgaa
cctgctgttctacacaatcttaaagttcgttttgtggagtcaaaacttatctacacttat
agtggaatcattttggttgcaatgaacccctataaacagttgccaatatatggggatgcc
attatccatgcatatagtgggcagaacatgggggatatggatccacatatatttgctgtg
gcagaagaggcttataaacaaatggcaagaaacaacaggaatcaatctgttatagtcagt
ggagaatcaggagctggaaaaactgtgtctgctagatatgctatgagatactttgccaca
gtcagtaagtcaaacagcaatgcgcatgtggaggataaagtactggcatccaacccaata
acagaggctgtaggcaatgcgaaaaccacacgcaacgataatagcagtcggttcgggaaa
tatactgaaatcagttttgatcagagacaccaaatcattggagccaacatgaggacgtac
ctgcttgagaaatccagagttgtctttcaatcagagaatgaacgaaattaccacatattc
taccagctgtgtgcttctgctctgcaaccagaatttaagcatcttaaattggggcatgca
gaagaatttaattatacaagaatgggtggcaatactgttatcgaaggagtcgatgacaga
gtagatatgatggagacccagaagacattcactctactaggtctgaaggaggattttcag
atggatgtttttaaaatactggcggccatcctacacttaggcaatgtgcaaatgacagct
gttggtgatgaaaaatcttcagtcagtctggaggataaacatctcaatatattctgtgaa
cttctggatttagacaatgacaaagtggcacaatggttgtgccaccgaaaaattatcact
gcctcagagactgtaataaagcctatgacaaaactccaagctcttaatgcaagggatgct
ttggcaaagaagatctattctcacctgtttgacttcattgtggaaagaattaacaaagcc
ttgcatttttctggaaagcagcacacttttattggtgttttggacatttatggatttgaa
acttttgatgtgaacagttttgagcagttttgcatcaattacgctaatgaaaaactgcaa
caacaatttaacctgcatgtctttaaacttgaacaagaggagtatatgaaggaagacatc
ccatgggctctcatagacttttatgacaaccaaccagtcattgaccttattgaagctaaa
atgggcattttagagctgctagatgaagagtgcttgttacctcaggggactgatgaaaat
tggcttcaaaagctatataacaattatatcaacaagaacccattctttcaaaagccaaaa
atgtcaaacacatcttttatcatccagcactttgctgataaggtagagtacaaatctgaa
ggatttctggaaaaaaacagagatacagtgtatgaagtattgattgacattttgagaaac
agcaagtttcatctgtgtgcaaacttttttcaagaccatccagtgcccatttcacccttc
cggtcaactataacagtcaaatctgcaaaaacgatggtcaagccacctaacaaacagttc
cggacgacggttggtagtaagttccgcagttctttgtatttacttatggaaacgcttaat
gcaaccactcctcactatgtacggtgcataaagccaaatgatgagaagttaccatttgag
tttgactcaaaaagggtggtgcaacaactgcgagcatgtggtgttttggaaaccattcga
attagcgcccagagctatccatccaggtggacttacattgaatttttcagccgttacagc
attctcatgacgcagcatgaactctctttaagtgacaagaaaaagatttgcaagactgtt
ttgcagcggctgatccaggatcctaaccagtatcagtttgggagaacaaaaattttcttc
agagcagggcaggttgcttatttagaaaaactgcggtcagataaactgagacaagcatgc
atcgtgatccaaaagaatgttcgaagctggcatcaacggaagaaattcctccgtataaaa
caagcagctgttacaatacagcagtacttccgtggacagcgggctgtacggcaagctatc
actgctacagctctaaagcaagcgtgggcggctatcattattcagaagtactgtcgggga
tatatagtccgtaaactttgccagctcatccgcgtggctgctataacaattcaagcttat
gtgcgaggatttctagcaaggaagaaattccaaaagatgctcaaggaacacaaggctgta
attcttcagaaatatgcccgggcttggcttgcaagacgcagatttcagaatattcggcga
tttgtgttgaatatccagctttcgtacagagttcagcgactgcagaagaaactagaagac
cagaacaaagaaaatcatggcttactggagaggctgactcacctggcttcgactcatgga
aatgacctagatacaatccagaaacttgaattagagcttgaaaaattagccacacaaaag
agaacctctgaggaaaaaggaaagaaatataaggaggacactgaacagaaactctcaaaa
cttgagaaacagaatgcagaactgcaagaacagaaaacattcttagaacagaagctccaa
gaggaaaccaaggaaatgaaagataaaatggatgaccttacaaaacaactgtttactgat
gtacaacaagaagaaagacaaagaataatacttgagaaaaagttccaaaatgagaagcaa
gactatgaaaaagagattgagtcattaaagggagaaattaagactctcagagaagagaaa
attaaactgcaagaccaaattcaggaagaacatataattcaggatgacttaaaactggaa
gtaggacaacttaaaaaacaggcaaagatgatacctgaattgcaaaaggaaattgaactg
ctccagacacagaaaatggatgtggaaaagcaggtccaatcccagaagcgagaaatgaga
gaaaaggtgtcagaagtagcaaaacaatttatcgagagctatgatgtggaggctgtaaga
agcaggctgtccatagaagatttggaacatttaaatgaagatggagaactttggtttgct
tatgagggcctgaaaaaagccacaagagtgttggaaagccaattccagtctcagaaagag
aactatgaaaaggagattgaagctttgaactttaaagttgaacatcttagtcaagaaatt
atccatttacaaaagttgtttagggaggaaaatgacataaatgacagcatccgacttgaa
gttagtagactaacatcggaaaacatgatgatcccagactttaaacagcggatttctgaa
cttcaaaagcaaaagatggatcttgaacaacgccttcaagaacaagctgcaaagacaaaa
ggaaaaatggaagaaatgcctaatggggtgcatcacaatctgtcagaggaaggtcaaaga
agaacactggaagaccagactgaaatacacacaaaagaagagaagcagattgtcacaatc
caagaaattcaagaggcaaacaatcacctaaaggagcaacatgaaattgagaatgaagta
aagagcaagataaagcaggaggcatttcatcttactctggaaaacatggatcttgaagaa
gagttagacatgaaagacagagtaataaaaaaattgcaggatcagatcaagaatcttacc
aagactattgaaaaagccaatgaaacacacgtgccagctgtgcccaaggagtacattgga
atgatggagtacagaaaggaagatgaagcaagaattattaaaaatctcatccttgatcta
aagccacgtggagtggtagtaaatatgattccgggcctcccagcttacatcctgttcatg
tgtgtgagatatgcagattatctgaatgatggtgacatgctgaaatctttcatgagtata
accactaatggtatcaaacaagttattaaggaacacgctgaagattttgagatcttgtcc
ttttggctctccaatacatatcattttcttaactgtttgaaacaatacagcggggaagag
gaattcatgaagcaaaatactccacgtcagaatatgaactgtttgaagcattttgatctt
tcagaatacagacaaattcttagtgacttggccattcgtatctatcaccaattcattctt
gtaatggagaataacattcagccaatgatagtaccaggtatgcttgaacatgaaagtctc
caaggaatttctggcatgaaacctacaggattccgtaaacgttcttctagtatagacgac
accgatacctacacaatgacctccatcctgcaacagctcagctatttttatagcaccatg
tgccagaatggcttggacacagagcttctaaagcaggcagtgaagcagcttttctttctg
attggagctgtcacccttaatagtcttttcctccgcaaggacatgtgctcttgtaggaaa
ggaatgcagataagatgtaatatcagctacttagaagaatggcttaaagaaaagaatctg
cagagcagttctgccaaggaaactttggaacctctctctcaggcagcctggctccttcag
gtcaaaaagatcacagacgatgatgccaaggagatatatgaacactgtacatccctgtct
gctgtacagatagtaaagatccttaattcatacactcctatagatgattttgagaaaaga
gtgtccccatcgttcgttcgcaaagtccaggctatgctcaacaatcgagaggatattcca
caattgatgctagataccaaatatctctttcaagtgacatttccttacaccccatctcca
catgccttggaaattatacaaattcccagcagtttcaaacttggctttctcacaagagtg
taa
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