Trachemys scripta elegans (red-eared slider): 117883543
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Entry
117883543 CDS
T07347
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04136
Autophagy - other
tst04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117883543 (WIPI2)
04136 Autophagy - other
117883543 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117883543 (WIPI2)
03029 Mitochondrial biogenesis [BR:
tst03029
]
117883543 (WIPI2)
Membrane trafficking [BR:
tst04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117883543 (WIPI2)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117883543 (WIPI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
DUF7165
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
VID27
BCAS3_WD40
Beta-prop_NWD2_C
RMC1_N
Motif
Other DBs
NCBI-GeneID:
117883543
NCBI-ProteinID:
XP_034638798
LinkDB
All DBs
Position
10:complement(9332136..9372185)
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AA seq
436 aa
AA seq
DB search
MNLASQSGEAGSGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSAAIGEVQVFDTINLRAANMI
PAHDSPLAALAFDANGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DGMFLSASSNTETVHIFKLETVKEKPQEEPTTWTGYFGKMLLSSTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICALATIQKIPRLLVGASDGYLYMYNLDPQEGGECTLMKQHKLDGS
MEPANEILESASHDRPLVAQTYSAAVTKGTYVPSSPTRHAYPEDLGAVGGACLEDETNAL
RLDEDSEHPPMILRTD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagagcggggaggccggctccggccagctgctcttcgccaacttc
aaccaggacaacacgtccctagctgttggcagtaagtcaggttacaaattcttctccctg
tcatctgtggacaaactggaacagatctatgaatgcaccgacacagaagatgtgtgcatc
gtggagaggctgttctccagtagcttggtggccatagttagcctgaaagccccacgcaag
ctgaaagtctgccactttaagaaggggactgagatttgcaactacagctattccaataca
atcctggctgtcaaactaaatagacagaggctgatagtatgcctagaagagtctctgtac
atacataacatacgagacatgaaggtgctgcatacaatcagggagacgccccccaaccct
gctggcttgtgcgccttgtcaataaacaatgacaattgctatctggcctacccaggaagt
gcggccatcggagaggtgcaagtctttgacaccatcaatctgagagctgctaatatgatc
ccagctcatgatagtcccttggctgcattggcctttgatgcaaatggcactaaacttgcc
acagcatcagaaaaggggacagtgatccgagtattttccattccagagggacagaaactc
tttgaattccgaaggggagtgaagaggtgtgtaagcatctgctcattggccttcagcatg
gatggcatgttcctctctgcatccagtaacacagagacagtgcacatcttcaaactcgag
actgtgaaagaaaaacctcaggaagagcccactacctggacaggttacttcggaaaaatg
ctgttgtcctccacaagctatctgccctctcaagtcacagaaatgtttaaccagggtaga
gcctttgctacagtccgtctgccattctgtggacacaaaaacatctgtgctcttgccaca
atccagaagattccccgtttactggtgggagcttctgatggatacctctatatgtacaac
ctggacccccaggaaggaggagagtgcacgctaatgaaacagcacaagctagatggcagt
atggagccagccaatgaaattttagagtctgcgtcacatgaccggccactagtagcacaa
acatatagtgctgctgtgacaaaaggtacttatgtgccttcatcacccacaagacatgcc
tatccagaggatctgggtgcagtgggtggagcttgcctggaagatgaaaccaatgcactg
cgattggatgaagacagtgagcatcctcccatgattcttcggactgactga
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