Trachemys scripta elegans (red-eared slider): 117883586
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Entry
117883586 CDS
T07347
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117883586 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117883586 (GSPT1)
03012 Translation factors [BR:
tst03012
]
117883586 (GSPT1)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117883586 (GSPT1)
Translation factors [BR:
tst03012
]
Eukaryotic type
Release factors
117883586 (GSPT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117883586
NCBI-ProteinID:
XP_034638910
LinkDB
All DBs
Position
10:complement(19850128..19889747)
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AA seq
624 aa
AA seq
DB search
MEANGNGSGSSSDSAPDCWDQADIEPGSGADPGSAPPAAEAQAEQPELLLDAAFSRQLNV
NAKPFVPNVHAAEFVPSFLRGGAAPGLPPPSPPPGLPPPPPHGASAESSQEEQTASCEGS
NVAVSMEVSEPVVENGETEMSPEESWDHKEETCEAELGGGPSGDAGHTEESAQEMMEEEE
EIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNFN
RSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDA
VAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLH
IHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKEFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaacgggaacggcagcgggagtagcagcgattcggctcccgactgctgggac
caggcggacatcgagccgggcagcggcgccgaccctgggtccgccccgccggccgcagag
gcccaggccgagcagccggagctcctccttgatgcggctttcagccgccagctcaacgtg
aacgccaagcccttcgtgcccaatgtccacgctgccgagttcgtgccgtccttcctgaga
gggggggcggcgcctggactaccgccgccctcccccccacctggcctgccgccgcccccg
ccccacggagcatctgcagagtcttcacaagaggagcaaacagcatcttgtgaaggttca
aatgttgctgttagtatggaagtctcagaacctgttgtagaaaatggagagacagaaatg
tcccctgaagaatcatgggatcacaaagaagaaacatgtgaagcagagctaggaggtggc
ccatcaggagatgcagggcatactgaggagagtgcccaggaaatgatggaggaagaggag
gaaataccaaaacctaaatctgtagtagcaccaccaggtgctcctaaaaaagaacatgta
aatgtagtattcattggacatgtagatgctggtaaatcaaccattggaggacaaataatg
tacttaacaggaatggttgacaaaagaacacttgagaaatatgaaagagaagctaaagag
aaaaacagagaaacctggtacctgtcttgggccttagacacaaatcaagaagaacgagac
aaaggtaaaacagtagaagtgggccgtgcctattttgaaacagagaagaaacacttcaca
atcctagatgccccagggcataagagctttgttccaaatatgattggcggggcttctcaa
gctgatctggctgtgttggttatttctgcaagaaaaggagagtttgaaactggatttgaa
aaagggggacaaacaagagaacatgccatgttagcaaaaacagcaggtgtaaaacattta
atagttcttattaataaaatggatgatccaactgtgaactggagtaacgaaagatatgaa
gaatgtaaagagaagctggtgccatttttgaagaaagttggcttcaatcccaaaaaagat
attcattttatgccctgctcgggactgactggagcaaaccttaaagagcaatcggatttc
tgtccttggtatatcgggttaccatttattccatatctggataatttgccaaacttcaac
cgttcagttgatggaccaatcaggctgccaattgtggataaatataaggatatgggcact
gtggtcctgggaaagctggaatcaggctctatttgcaaaggacagcaacttgtgatgatg
ccaaacaagcacaacgtggaagttcttggaatcctttctgatgatgtagaaactgatgct
gtagccccaggtgaaaacctgaagattagactgaaaggaattgaagaggaggagatcctt
ccaggatttatactctgtgaccctaataacctttgtcattctggacgcacatttgatgcc
cagatagtgataattgagcacaaatccatcatctgccctggttataatgcggtgctgcac
attcatacctgtattgaagaagtcgagataacagccttaatctgcttggtagacaaaaaa
tcaggagaaaaaagtaagacacgaccacgttttgtgaaacaagatcaagtatgcattgcc
cgtttaaggacagcaggaaccatctgccttgagacattcaaagagttccctcagatgggt
cgttttaccttaagagatgagggtaagaccattgcaattggaaaagttctgaaactggtt
ccagagaaggactaa
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