KEGG   Trachemys scripta elegans (red-eared slider): 117883590
Entry
117883590         CDS       T07347                                 
Symbol
WDR61
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tst00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117883590 (WDR61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tst03019]
    117883590 (WDR61)
Messenger RNA biogenesis [BR:tst03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     117883590 (WDR61)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C CFAP251_N Beta-prop_EML Beta-prop_VPS8 Beta-prop_RIG_2nd WDR90_beta-prop_4th DSE1_N Beta-prop_SCAP Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_WDR41 Beta-prop_DCAF4 ASA1 Tricorn_2nd Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_SPT8 PROPPIN PD40 Beta-prop_IFT140_1st NBCH_WD40 Ge1_WD40 PAC11 Beta-prop_WDR75_2nd TRM82_WD WD40_like Beta-prop_NUP159_NUP214 WDR54 Beta-prop_DCAF12 Beta-prop_pof12 BCAS3_WD40 Beta-prop_IFT122_2nd DUF2415 Vgb_lyase UCP007778
Other DBs
NCBI-GeneID: 117883590
NCBI-ProteinID: XP_034638922
LinkDB
Position
10:51098532..51112379
AA seq 305 aa
MTTQYSILFKQEQAHDDAIWSVAWGKNKRDGSETVISGSLDDLVKVWKWTDEKLDLQWTL
EGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQY
LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
CPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVQYNGNGSKIVSVGDDQEIHI
YDCPI
NT seq 918 nt   +upstreamnt  +downstreamnt
atgaccacacagtacagtattctcttcaagcaagaacaagcacatgatgatgccatctgg
tcagttgcatggggaaagaataaaagagatggttctgagacagtaatctctggatcttta
gatgatctagtgaaggtctggaaatggactgatgaaaaattagatctacaatggacttta
gagggccatcaactgggtgtggtatcagtagatatcagccacacaggttccattgcagca
tccagttccctagatgctcatattcgtctttgggatttagaaactggcaaacagatcaag
tccatagatgctggtcctgttgatgcctggtcgttggctttttcaccagattcccaatat
cttgcaacaggaagtcatgtgggaaaagtgaacatttttggtgttgaaaccggaaaaaag
gaatattctctggacactagagggaaattcatccttagcattgcatatagtccagatgga
aaatatttagccagtggagcaatagatggcatcatcaatatttttgatattgcaactgga
aaacttctgcatacgctagaaggccatgcgatgccaattcgctcattgacattttctccg
gattcccaactactcgttacagcttcagatgatggatatatcaaaatctatgatgtacaa
catgcaaacttggcaggcacactaagtggtcatggatcctgggtattaaatgtggcattt
tgtccagatgatactcattttgtttccagttcatctgacaaaagcgtaaaagtttgggat
gctggaacaaggacctgtgttcataccttctttgatcatcaggatcaggtctggggagtg
caatacaatggaaatggttccaaaattgtatctgttggagacgaccaggaaatccatatc
tatgactgtccaatttaa

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