Trachemys scripta elegans (red-eared slider): 117883598
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Entry
117883598 CDS
T07347
Symbol
DIS3L
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117883598 (DIS3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117883598 (DIS3L)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
117883598 (DIS3L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_S1
CSD2
Motif
Other DBs
NCBI-GeneID:
117883598
NCBI-ProteinID:
XP_034638936
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All DBs
Position
10:80164911..80181293
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AA seq
759 aa
AA seq
DB search
MSSQRYSSFKGRVVGIIQKNWRDYVVTFPSKEESQSQGKNAQKILVTPWDYRIPKIRIST
QQAEALQDCRVIVRIDSWESTSVYPNGHFVRVLGRIGDLEGETAVILVENSISVAPFSEA
QMCEMPSSTSENPWKVNPEEELKRIDLRNTHLIFSIDPKGCEDVDDALSIRTLANGNLEL
GVHIADVTHFVEANSYTDIEARARATTYYLADRRYDMLPSILSADLCSLLSRVERYAVSV
MWELDKNSYEILRVWYNRTIIQSSYKLVYEVAQGLLDGDLSVVDDILELKELDERTRQQK
LEELVWAIGKLTDVARRVRAKRDRCGALELEGVEIRVQLDDKKNIHDLIPKQPLEVHETV
AECMILANHWVAKMIWENFPHHALLRQHPPPRQEFFSELRECASAKGFSIDTRSNKALAD
SLSKADDPLDPTVNKLLRSMATQAMSNALYFSTGSCPEEEFHHYGLALDKYTHFTSPIRR
YADIVVHRLLMAATLKDTKVDVTVNLFSNKALEELCRHINNRNRAAQHAQKQSTELFQCM
YFKDKVSETDERCTADGVVYSIRTNGVLVFVPRYGIKGAAYLKNKEGLVISCQSDGSCVW
KPGSLQRFQNRITSTTVAGESVTLSLFDHITVSLNKFTNGSTRAQMRGKITLCTFVSKVK
VCVQSSRCHPDTIKLEIISNLPYKNTATELYQKNIHIMKADLVKEVTRSAEEAQLAQEKN
RVEVIQEEYQEYCQTKGVSLYQLLEEIRDLALLDVSTGN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccaacggtactcctctttcaaaggtagagttgttggaatcatccagaagaac
tggcgagattatgtggtcacttttccatccaaagaagagagtcagtctcagggtaaaaat
gcccagaaaatccttgttacaccttgggattacagaattcctaaaatcaggatcagcaca
cagcaggctgaggcactacaggactgtagagttattgtgcgtattgattcctgggagtca
acatctgtgtatccaaatggacattttgtacgagttttaggacggataggagatctcgaa
ggggaaactgcagttattctagtggagaacagcatttctgttgcccctttctcagaagcc
cagatgtgtgaaatgccttccagcacctcagagaatccatggaaggtgaatccagaggag
gaactaaaacgcatagacttgaggaatacacatttaatattcagcattgaccccaaaggc
tgtgaagatgtggatgatgcactgtccattagaacattagccaatgggaacctagagcta
ggtgttcatattgcagatgtaacccattttgtggaagcaaattcttacactgacattgag
gccagagcaagggcaacaacctattatttagctgatcgtcgttatgatatgctgccttcc
atcctgagtgctgacttatgctctcttcttagcagagttgaaaggtatgctgtcagtgtc
atgtgggagctagataaaaattcctatgaaatcctgagagtctggtacaacagaaccatc
attcagtcttcatacaaactggtctacgaggtagctcagggattattagatggtgaccta
agtgttgttgatgatatcctagaactcaaagaactggatgagagaactagacaacagaag
ctggaagaactggtctgggcaataggaaaactgacggatgtagctcgacgtgttcgggct
aaacgtgaccgctgtggcgctctagagctggaaggagtagaaataagagtgcagctggat
gataaaaagaacattcatgatctcatccctaaacagccactggaggtgcatgagactgtt
gctgaatgtatgatccttgctaaccactgggtggcaaagatgatttgggagaactttcct
caccacgctttgctgcgccaacaccctccaccacgacaagagtttttttctgagctccga
gaatgcgcgagtgccaaaggcttttccatagacacacggtctaataaagcactggctgat
tctctgagtaaagcagatgatcctttagatccaactgtgaataaattactgcggtccatg
gctactcaggcgatgtctaatgcactgtacttctcgactggctcgtgccccgaagaagag
ttccatcattatggacttgccctagataaatatacgcattttacttctccaattagaaga
tatgctgatattgtcgtccacagactgctaatggctgccactttaaaagatactaaagta
gatgttacggttaatttgttcagcaacaaagctcttgaggaattgtgtagacacatcaac
aacagaaacagggctgcacaacatgcccagaaacagtctacggagcttttccagtgtatg
tatttcaaagacaaagtctcggaaacagatgagcgctgtacagcagatggtgttgtttac
tccattcgaacaaatggggtacttgtttttgtaccaaggtatggcattaaaggtgctgct
tatctgaaaaacaaggagggtttggtcatctcctgtcagtctgatggcagttgtgtatgg
aaacctggttctcttcagcgttttcagaacagaattacttccacaacagttgctggagaa
tctgttacattgagtctgtttgaccatataacagtaagtcttaataaattcactaatgga
agcaccagagcacaaatgaggggaaaaataacattgtgtacttttgtttctaaggtaaaa
gtatgtgtgcagagttcacgctgccatcctgacaccatcaagcttgaaataattagcaac
ctaccttacaagaatacagccacagagctttaccagaagaatatccacataatgaaagcc
gacttagtaaaagaagtaacaagatctgcagaggaagcgcaacttgcccaagaaaaaaac
agagttgaagtaatccaggaagaatatcaggagtattgccaaacaaagggagttagcttg
taccaactgcttgaggaaattagggacttagctctactagacgtatcaactggtaattga
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