Trachemys scripta elegans (red-eared slider): 117883618
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Entry
117883618 CDS
T07347
Symbol
TRAF7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117883618 (TRAF7)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117883618 (TRAF7)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
117883618 (TRAF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
WDR55
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
NBCH_WD40
WD40_like
Beta-prop_IP5PC_F
Beta-prop_SPT8
zf-RING_UBOX
Beta-prop_DCAF4
zf-C3HC4
zf-C3HC4_2
zf-TRAF
Beta-prop_EIPR1
Beta-prop_IFT140_2nd
zf-C3HC4_4
Sina_ZnF
Beta-prop_Nup120_160
zf-C3HC4_3
WD40_MABP1-WDR62_1st
zf-RING_5
PKcGMP_CC
WDR90_beta-prop_4th
DUF641
MIOS_WD40
Filament
DUF16
U-box
KxDL
DUF4164
Motif
Other DBs
NCBI-GeneID:
117883618
NCBI-ProteinID:
XP_034638992
LinkDB
All DBs
Position
10:complement(3243886..3287305)
Genome browser
AA seq
670 aa
AA seq
DB search
MSSNKSARYNHFSSGAANITTSENTNGTRMETTFGPAYSAVTTITKADGTNTFKQHRRTP
SSSSTLTYSPRDEDDGMPPISTPRRSDSAISVRSLHSESNMSLRSTFSLHEEEEEPEPLV
FAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSEKCPVDNAKLTVVVNNIAVAEQ
IGELFIHCKYGCRPAASSKPAAFEVDPHGCPFTIKLSARKDHESSCDYRPVRCPNNPSCP
PLLKMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLEMCKFEGLKEFLQQTDDRFHE
MQVAMAQKDQEIAFLRSMLGKLSEKIDQLEKNLELKFDVLDENQSKLSEDLMEFRRDASM
LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTI
KVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQTLQKVNTIRAHDN
PVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQT
IKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVG
TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA
VDSTVKVWTC
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaaacaagagcgctcgctacaatcacttctccagtggcgcagcaaacatcact
acttctgagaacactaacgggacgagaatggaaacgacttttgggcctgcctattccgct
gtgaccaccatcacgaaagctgacgggaccaatacctttaagcagcaccgtaggactccc
tcttcatccagcacgctcacctactccccacgagacgaggacgatggcatgcctccaatc
agtaccccacgccgttccgactccgccatctctgttcgctcgttacactctgagtccaac
atgtccttgcgctcgacattctcgctccacgaagaagaggaggaaccagagcccttggtg
tttgccgaacagccatcagtcaaactctgctgccagttgtgttgtagtgtgtttaaagat
ccagtcatcacaacctgtgggcacacgttttgcagaagatgtgccttaacatctgagaag
tgcccagtggacaacgccaaactgactgtggttgttaacaatattgctgtggccgagcag
ataggggagctgttcattcactgtaaatatggctgccggcccgccgccagcagcaagcct
gctgccttcgaggtggacccccacggatgcccctttaccattaaactgagcgcccggaaa
gatcacgaaagcagctgtgattacagaccagttcgctgtcccaataaccccagctgccca
cctctcttgaaaatgaacctggaggcgcatctcaaagagtgtgaacacatcaagtgccct
cattccaaatacgggtgtacgttcataggaaatcaagacacctacgagactcacttggag
atgtgtaagtttgaggggctgaaggagttcctgcagcagacagacgaccgcttccacgag
atgcaggtggcaatggctcagaaggaccaagaaatcgccttcctgcgctcaatgctgggc
aagctctccgagaagattgaccagttggagaagaacctggaactcaaatttgatgtgctg
gatgagaaccaaagcaagctgagcgaggacctgatggagttccgcagggatgcctccatg
ctaaatgatgaactgtcccacatcaacgcccgcctcaacatgggcatcctaggatcgtac
gatcctcagcagatcttcaaatgcaaggggacctttgtcgggcaccaaggccctgtctgg
tgtctgtgtgtttactccataggagacttgcttttcagtggctcctcagacaaaaccatt
aaggtgtgggatacctgcaccacatacaagtgccaaaagaccttggagggccacgatggg
attgtcctcgctctctgcattcaggggaacaagctgtacagcggctctgctgactgcacc
atcattgtctgggatattcaaaccttgcagaaggtgaacacgatccgagcgcatgacaat
cctgtttgcactttggtctcctcacacaacatgctgttcagtggctcccttaaagccatt
aaggtctgggacatcgtgggcaccgaactcaagctgaaaaaggaattgacaggtctcaat
cactgggtgcgagcacttgtggcttctcaaaactatctctacagtgggtcttaccaaaca
atcaagatctgggacatccggaacctggagtgtgtccatgtgctgcagacgtcagggggc
agcgtgtactccatcgccgtgaccaaccatcacatcgtgtgtggcacctacgagaacctc
atccatgtctgggatatcgagtcgaaggagcaggtgcgcacgctgaccgggcacgtgggg
acggtgtacgccctggccgtcatctccacgccggatcaaaccaaagtcttcagcgcgtcg
tacgatcgctctctcagggtgtggagcatggacaacatgatttgcactcagacgctgctg
cggcaccagggcagcgtgacggcgctcgcagtctccaggggccgcctcttctccggcgct
gtggacagcactgtcaaggtctggacgtgctaa
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