Trachemys scripta elegans (red-eared slider): 117883644
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Entry
117883644 CDS
T07347
Symbol
AP4E1
Name
(RefSeq) AP-4 complex subunit epsilon-1 isoform X1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117883644 (AP4E1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117883644 (AP4E1)
Membrane trafficking [BR:
tst04131
]
Endosome - Golgi transport
Others
AP-4 complex
117883644 (AP4E1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
INTS1_R4
Coatomer_b_Cpla
mTOR_dom
Proteasom_PSMB
Motif
Other DBs
NCBI-GeneID:
117883644
NCBI-ProteinID:
XP_034639073
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All DBs
Position
10:63648429..63680954
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AA seq
1148 aa
AA seq
DB search
MSDVVERTLSALPGLLGQQDPGAGPGGGPGRVSATSRLGGLIRSITALSSKHEEEKLIQQ
EQTNLKATVSAPTTTLRLMKECMVRLIYCEMLGYESSFGYIHAIKLAQQGNLLEKRVGYL
AVSLFLHENHELLLLLVNTVVKDLQSTNLVEVCMALTVVSQIFPREMIPAVLPLIEDKLQ
HSKEIIRRKAVQALYKFYLIAPNQVQHIHDKFRKALCDRDVGVMAASLHIYLQMIKKNAS
GYKDLTESFVSILKQVVGGKLPIDFNYHSVPAPWLQIQLLRILGLLGKDDPRTSELMYDV
LDESLRRAEINHNITYAILFECVQTIYTICPKSDLLEKAAKCIGKFVLSPKINLKYLGLK
ALTYVIQQDPNLALQHQMTIIECLDHPDPIIKRETLELLYRITNGQNVTVIVQKMLDYLR
QSKEEYTIINLTGKIAELVEKYAPDNEWFIQTMNAVFSVGGDVMHPDIPNNFLRLLAEGF
DDEKEDEELRLYAVQSYLSLLEEEDTFYPQKFLQVMSWVLGEYSYLINDGDPEVIITRLH
RLLKQTFVTSETKAWIMTAVTKMSSRMSCSKTVDKLIQEFSTSLDTCMRQYAFELKHLCE
NKELMKNLFPLDASCDEIMVDASLSFLDGFVAEGLSCGAAPYKPHHQRQEEKLSQEKALN
FEPYGLSFTSSMSSSGFTGRQSPAGLSLGSDMSGNSAELGQKETNCLKLDGVRKLWGKEG
YLPKKENKTGKEDKTQPVPQDSILTAHVVDPPLMQSEQQVVSLSEEEKEKQQLASTLFVG
LGSNSTISLMGRADIITQKFKKKSKISETQNSEEASSFQNIATLPFSSLPDTAPNNKENF
QGNEHLGLRKISLSSSEVLEASVSFETSQSVTEVGLDEQLSNCRLSTSSLFADSNIEVFQ
PPQNVTDIVANKAPLSLCLPEELAGHPHSEIVELCSSDILTVYWCKVWTDDCSLLVLFVA
NNSTSPLKTVNLVFESAEHFKIFESLSCHFPVIEAQSMESCQKCVQLEKVCTEGVLSGSI
SYHLDTDTHLEFSLTFSLSDFIRPMKMTTEDFGRLWLSFSNDVKQNLKMSPSRGSLSIAL
NALKQKLKLHIVEIIGNEGIAACRLLPSVPCLLHCRTHARTLALWFRSSCSALPDSLLYQ
CQKVMEEA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtggtggagcggacgctgagcgcgctgcccggcctgctggggcaacaggac
ccgggggccgggcccggaggaggtccgggtcgggtctcggccacctcgcggctgggcggc
ttgatccggagcatcaccgcgctctcctccaaacatgaggaagaaaaattaatacaacag
gaacaaactaatttgaaggcaacagtttctgctcccactacaacacttagactgatgaaa
gaatgtatggtgagactaatctattgtgaaatgctgggatatgagtcctccttcggatac
atccatgctattaagctagcacaacagggaaaccttctagaaaaaagagttggttacttg
gctgtttctttattcctccatgaaaatcacgaactgttgcttctgcttgtgaacacagtt
gtgaaggacttgcagagcactaacctggttgaggtgtgtatggcacttactgttgtcagc
cagatctttccacgggaaatgattccagctgtacttcccctcatagaagacaaactgcag
cattctaaggaaattatcagaagaaaagcagttcaggccttgtataaattctatctcatt
gctcccaaccaagtccagcacatccatgacaagttccggaaagccctgtgtgacagggat
gttggagtcatggcagcttctttacacatttaccttcaaatgattaagaaaaatgcatct
ggatacaaggacttgacagagagctttgtatccattctaaagcaggtagtaggaggaaag
cttcctatagacttcaattaccacagtgtgccagcaccatggctacaaattcagctctta
agaatactggggctgttaggaaaagatgatccaaggacaagtgaattaatgtatgatgtt
ctggatgagtctttaagaagagcagaaataaatcataatattacatatgctatcttattt
gaatgtgtacaaacaatttataccatttgccccaaatctgacctgcttgagaaggctgcc
aaatgcattggaaaatttgttctatcacctaaaattaatttgaagtatttaggactaaaa
gctctgacctatgttatccagcaggatcctaatctggcacttcagcaccaaatgacaata
attgaatgtcttgaccatcctgatcctatcatcaaaagggaaacattggagcttctctat
agaattaccaatgggcagaatgtaactgtcatagttcaaaagatgctggactacttaaga
caaagcaaggaagaatataccatcatcaacttaactggcaaaatagcagaattagttgag
aaatatgcccctgacaatgagtggttcatccagactatgaatgccgtattttcagtagga
ggagatgtaatgcaccctgacatcccaaacaacttcttgaggctgctggctgaaggattt
gatgatgaaaaggaagatgaggagctacggctttatgctgtccagtcttatctttctttg
ctggaggaggaagatactttttatccacagaaatttcttcaagttatgagctgggttttg
ggggagtattcctaccttataaatgatggtgatccagaagtcattataacaagactgcac
aggttgctgaagcagacttttgttacttctgaaactaaagcctggattatgactgcagtc
actaaaatgtcatcccgcatgtcctgttctaaaacagttgataaactaatccaggaattc
agcacttctctagacacatgcatgaggcaatatgcctttgaattaaaacatctgtgtgaa
aacaaggagctgatgaaaaacttgtttccgcttgatgccagttgtgatgagataatggta
gatgcttccttatctttcctagatgggtttgtggctgaaggacttagctgtggtgcagca
ccatataaacctcatcaccagagacaggaggagaagctttctcaggaaaaagctctgaat
tttgaaccttatggattgtcgtttacttcaagcatgtcttcatccggcttcactggccgg
caatctcctgctggtctttctcttggttcagacatgtctggtaatagtgccgagttagga
cagaaagagaccaattgtctgaaacttgatggtgtgaggaaattatgggggaaagaaggc
tacctcccgaaaaaagagaacaaaacaggaaaagaagataaaacacaacctgttcctcaa
gatagcatattaacagcacatgtagttgatcctcctctgatgcagtctgagcaacaggta
gtcagcctttcagaggaagaaaaggagaagcagcagctagcatcaacattgtttgttggg
ctagggtcaaacagcactatcagtctgatggggagagcagacatcatcactcagaagttt
aaaaaaaaatcaaaaataagtgaaacccagaatagcgaagaagcatctagcttccaaaat
attgctaccttgcctttcagttccttacctgatacagctcctaacaataaggaaaacttt
cagggcaatgaacatctcggattaaggaagatctcactgagttcttcagaagttttggaa
gctagtgtatcatttgaaacgtctcaatctgtaacagaagttggactggatgagcagctt
tcaaactgtagactatcgacatcctctttgtttgctgatagtaatattgaagtttttcag
cctccccaaaatgttacagatatagttgccaataaggcccccttgagtctttgcttacca
gaagaactagctggtcaccctcattcggaaatagtagagctttgtagtagtgacatcctg
actgtgtactggtgtaaagtttggacagatgactgttcactgcttgtcctgtttgttgcc
aacaacagcacctcaccactcaaaactgtgaacctagtgtttgaaagtgcagagcatttt
aagatctttgagagtcttagctgtcattttcctgtcatagaagctcaaagcatggaaagc
tgccaaaagtgtgtgcagttggaaaaagtctgtacagagggcgttctctctggctccatt
agttatcatctagatacggatactcatcttgagttttcactaactttctcactgtcagat
ttcatcagaccaatgaaaatgaccactgaagactttgggagattgtggctgtccttttct
aatgatgtgaaacaaaatctaaaaatgtcaccttctcggggatctctctcaatagctctg
aatgccctgaagcagaaactaaagctccatattgttgaaattattggtaatgagggaata
gcggcatgccggctacttccatcagtcccctgtctgctgcattgtcgtactcatgcaagg
acactggcactctggtttagatcctcttgttctgctcttccagacagtttattgtatcag
tgtcaaaaggtgatggaggaagcttaa
DBGET
integrated database retrieval system
