Trachemys scripta elegans (red-eared slider): 117883670
Help
Entry
117883670 CDS
T07347
Symbol
ABCA3
Name
(RefSeq) ATP-binding cassette sub-family A member 3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117883670 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117883670 (ABCA3)
Transporters [BR:
tst02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117883670 (ABCA3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
ACT_13
AAA_21
AAA_23
RsgA_GTPase
AAA_22
AAA_30
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
117883670
NCBI-ProteinID:
XP_034639130
LinkDB
All DBs
Position
10:complement(35816387..35902270)
Genome browser
AA seq
1707 aa
AA seq
DB search
MVVLRQFGLLLWKNYILQKRQILVTVIEICLPLLFAAILIALRHRVHSISHPNATIYPSQ
SVDELPWFFHHRKLSPWELAYVPSNVTAVKSIAEAVEKALHINIKAQGFPSEKEFEDYVK
FDNRSGNVLAALVFKHCFNQSKDPLQLQVNYQLRFKYSPRNAPRSEQTGLNPNLDRDWHT
SYLFPLFQLPGPREAKFPDGGTPGYIREGFLAVQHAVDRAIIQYHANASATRLLEGFTVA
VRRFPYPPYVNDLFLLAIQNQLPLLLMLSFTYTSLNIVRAVVHEKEKKLKEYMRMMGLSN
WLHWSAWFLMFFLFLLVSIFFVTVLFCVKVSQQGAVLTNSDPTLVFTFLAVFSISSISFS
FMVSTFFSRANVAAAAGGFLYFFSYIPYFFISPRYDLMSHSQKLSSCLISNVAMAMGAQL
IGMFEGKGTGVQWQDLMKPVSVDDNFTFAQVLGMLLLDSVLYGLVAWYVEAVFPGEYGVP
QPWYFFLTPSYWCGSPRTVLGKEKEEEEDPEKALKSQYIEEEPADLVSGIKIKHLSKVFK
VGSKTKEAVRDLTLNMYEGQITVLLGHNGAGKTTTLSMLTGLYPPTSGQAYISGYEISRD
MVLIRRSLGLCPQHDVLFDNMTVTEHLYFYSGLKGYPSLKCPEEIDRIVRLLNLEEKRCS
LSKALSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPASRRATWDLLQHQRSSRTILLTT
HFMDEADLLGDRIAIMAQGELQCCGSSLFLKHKYGAGYHMVMVKEPYCNLGDISRLICQY
VPNASLESNAGAELSFILPTESTHRFEALFTELEQKREELGIASYGASVTTMEEVFLRVG
KLVDSSMDIQAIQLPALQYQHERRSNDWAMDDSSSLSGMTDMTDDSGALITEDCSSIKLN
TGFYLCCQQFYAMFMKRAVYSWRNWKMVAAQFLVPLIFTALALVVAKTFPGPRDSALLRL
TLDPYGKTVVPFSVSEASWISPRLAEQYAVLLDAQGQVPLEVLGDLDEYLISRAAEEGGT
FNERYIAAASFEEVKNRTVVTALFNNQAYHASATALMLADNALFRLLAGPNASITVTNYP
QPRNITETAKDQLMEGQTGFAIAINLLYGMASLSSTFALLLVSERAIKAKHVQFVSGVYV
ANFWLSALLWDLINFLIPCALMLVIFQAFDVKAFTQDSHLVDVMLIFLLYGWAIIPLMYL
LSFFFSVAATAYTRLTIFNIFSGTATFLAVTIMSIPELGLVDLSRTLDKIFLILPNYCLG
QCISDFYQNYEFIQFCTSSVEAIIICKAFNISYQTNYFSWETPGIGQYLTSMSVQGTAFL
LLLFLIETNLLWRLRTLVCGICRRRKWAMLLNRMPVLPEDRDVADERKKVLESPPELLSS
LSSPLVIKELTKVYNSSESLLAVDRISLAVNKGECFGLLGFNGAGKTTTFKMLTGDESIT
SGDAYVDGHSILANIKKVQQRIGYCPQFDALLDHMTGRETLSLYARLRGIPERYIGSCVE
NMLRGLLLEPHADKLVRSYSGGNKRKLSAGIALIGGPPVIFMDEPSTGMDPVARRLLWDA
VTRTRECGKSIIITSHSMEECEALCTRLAIMVNGQFKCLGSPQHLKSKFGSGYTLLAKTR
AEEEGDVQVFKAFVEKMFPGSVLKHEHQGMVHYHLTNKNLSWAQVFGALERAKEKFHVED
YSVSQISLEQVFMSFTRFQHCTEERGK
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgttaaggcagtttgggttgcttctctggaagaactacattttgcagaagcga
cagattttggtaacggtcatagaaatctgcttgccattgctatttgctgcaatcctcatt
gcgctccgccaccgagtgcattcgatcagtcaccccaatgccaccatctaccccagccag
tcagtggatgagctgccatggtttttccatcaccggaagctcagcccctgggagctggct
tatgtcccctccaatgtcactgctgtgaagagcatcgcggaggcagtggaaaaggcgttg
cacatcaatatcaaagctcaagggttcccctcggagaaggagtttgaggactatgtgaag
tttgataaccgctcgggtaacgtgctggccgccctcgttttcaaacactgcttcaatcag
agcaaggaccccttgcagctgcaggttaattatcagctgcgcttcaaatacagccctagg
aatgccccccggagcgagcagacaggcctgaaccccaacctcgaccgtgactggcacacc
agctacctgttcccacttttccagttaccaggccccagagaagccaagttccctgatgga
gggacgccaggttacatccgggaagggttcctggctgtgcagcatgccgttgacagagcc
atcattcaatatcatgccaacgcctctgccacccgcctgctggaggggttcaccgtggcc
gtccggcgcttcccctacccaccatacgtcaacgacctcttcctcctggccatccagaac
cagctgcccctgttgctcatgctgagcttcacctacacctcgctcaacatcgtccgcgcc
gttgtgcatgagaaggagaaaaagttgaaggaatatatgcgcatgatgggcctcagtaac
tggctgcattggagcgcctggttcctcatgttcttcctcttcctcctggtgtccatattc
ttcgtcacggtgctcttttgtgtcaaggtaagccagcagggggcggtactcaccaacagt
gacccaaccctggtgttcaccttcctggccgtcttctccatctcctccatctccttcagc
ttcatggtcagcaccttcttctccagagcaaacgtggcagctgccgctgggggtttcctt
tactttttctcctacatcccctacttctttatctcgcctcgctacgatctgatgtcccac
agtcagaaactgtcgtcctgcctcatctccaatgttgccatggccatgggggcacagctg
ataggcatgtttgaaggaaaagggaccggcgttcagtggcaggatctcatgaagccagtc
agcgtggatgataacttcacctttgcacaggtgctggggatgctgctgttggactctgtc
ctctatggcctggtggcctggtacgtggaggccgtcttcccaggggagtatggcgtgccg
cagccgtggtacttcttcttgacgccctcatactggtgcgggtctcccagaaccgtcctg
gggaaagagaaggaggaagaggaggacccggagaaggccctgaaaagccagtacattgag
gaagagcctgccgatctggtgtcagggatcaaaataaagcacctctccaaggtgttcaaa
gtggggagcaagaccaaggaggcagtaagggacttgaccctgaacatgtatgaggggcag
atcactgtccttctgggacacaacggtgccgggaagacaaccaccctgtccatgctcaca
ggtctgtatcctcccacgagtggccaggcttacatcagcggctacgagatctcccgggac
atggttctgatccgaaggagtctgggtctgtgtccccagcacgacgttctgtttgacaac
atgacagtgacggagcacctgtacttctactctgggctgaagggctacccctcgctgaag
tgcccggaggagattgaccgcattgtgaggctgctgaacctggaggagaagcgctgctct
ctgtcgaaggcgctgtccgggggcatgaaacgcaagctgtccatcggcatcgcgctcatc
ggggactccaaggtggtgatgctggatgagccgacgtcaggaatggacccagcctcccgc
agggccacctgggacctcctccagcaccagaggagcagccgtaccatcctgctgaccacc
cacttcatggatgaggcagatctgcttggagaccgcatcgccatcatggcccagggcgag
ctgcagtgttgtgggtcctcgctcttcctcaagcacaaatatggtgccggctaccacatg
gtgatggtgaaggagccgtactgtaacctcggagacatctcccgcctcatttgtcagtac
gtgcccaatgccagcctggagagcaatgccggggccgagctgtcgttcattctgcccaca
gagagcacacacaggtttgaggcgctgttcacggagctggagcagaaacgggaggagctg
gggattgctagctatggtgcctctgtcaccactatggaggaggtcttcctcagggttggc
aagctagtggactccagcatggatatccaagccatccaactccctgccctgcagtaccag
cacgagaggcggtccaacgactgggccatggatgactccagcagcctgagtggaatgact
gacatgactgatgatagtggggctttgatcacggaggattgctccagtatcaaattgaac
acggggttctacctatgctgccagcagttctatgccatgttcatgaagagggcagtgtac
agctggcgcaactggaagatggtggcagcgcagttcctggtgcctctgatttttacagcc
cttgctctggttgttgccaagaccttccccgggccaagagattctgcgctgctcaggctg
acgctggacccgtatggcaagactgtcgtgcctttctctgtctccgaggcatcctggatc
tccccaaggctggcagaacagtatgcagtgctgctggatgctcaaggccaagtgcccctg
gaggtgctaggtgacctggatgagtacctgatctcccgagcggcggaggagggcggaact
ttcaacgaacgctacattgcagctgcttccttcgaagaggtcaaaaaccgcacggtggtc
acggcactgttcaacaaccaggcgtatcatgcctccgccactgcactgatgctggcagac
aacgccctgttccggctgctggctggacccaatgcttccatcactgtcaccaactatccc
cagccccggaacatcacagagacagcgaaggaccagctcatggaaggccagactgggttc
gccattgctatcaacttactctatgggatggcgtccttgtccagcaccttcgcgctcctg
ctggtcagcgagagagccatcaaggccaagcacgtgcagtttgtcagcggggtctacgtg
gccaatttttggctctcagccctgctttgggacctcatcaactttctcattccctgtgcg
ctgatgctggtgatattccaagccttcgatgtgaaagctttcacccaggacagccacctc
gtcgatgtgatgctgatcttcctgctctacggctgggccatcatccccctcatgtacctg
ctcagcttcttcttttcagtagcagctacggcctacacgcgcctcaccatcttcaacatc
ttctcgggcacagccaccttcctcgcagtcacgatcatgagcattccagagctgggcctt
gtggacctgtccagaaccctggataaaatcttcttgattttgcccaactactgcttgggc
cagtgcatcagtgatttctaccagaactatgagttcattcagttttgcacctcttccgtc
gaagccatcatcatctgcaaagcgttcaatatcagttaccagacgaattacttctcatgg
gagactccagggatcgggcaatatctgacctccatgagtgtccagggcaccgccttcctc
cttcttctcttcctcattgaaactaacctcctctggagactgaggaccttagtctgcggc
atctgtaggaggcggaaatgggcaatgctgctgaacaggatgcccgtgctgccggaagac
cgggacgtggcagatgagaggaagaaagttttggagtccccgccagagctgctgtcatcg
ctgagcagcccactggtcatcaaagagctcactaaggtgtataacagcagtgagtccctg
ctagctgtggacagaatctccctggcggtcaacaaaggggagtgctttggcctgctgggc
ttcaatggagctggcaaaaccaccaccttcaaaatgctgacgggcgacgagagcatcacc
tcgggggatgcctacgtggacggccacagcattctggccaacatcaaaaaggtccagcag
cggatcggctactgccctcagtttgatgccctgttggatcacatgactgggcgggagaca
ctgagcctgtatgcccggcttcgggggattcccgagcgctacatcggcagctgcgtggag
aacatgttgcgagggctgctcttggagccccatgcagacaagctagtgaggtcctacagc
ggcggcaacaagcggaagctgagtgccggcattgccctgattggtgggcctcctgtgatc
ttcatggatgagccctccaccggcatggaccctgtggcccggcgcctgctctgggatgct
gtgaccaggacacgggaatgtggaaaatccatcatcatcacctcccacagcatggaagag
tgcgaggccttgtgcaccaggctggccatcatggtgaacgggcagttcaaatgcctaggc
agcccccagcacctgaagagcaagttcggcagcggatacaccctcctagcaaaaaccagg
gccgaggaggagggtgacgtgcaggtgttcaaggcctttgtggagaagatgtttccaggg
agcgtcctgaagcacgagcaccaaggcatggtccattatcacttgaccaacaagaacctc
agctgggcacaggtcttcggggcgctggagagagccaaagagaagttccacgtggaggat
tattccgtcagccagatctccctggagcaggtcttcatgagcttcacccgcttccagcac
tgcacagaggagcgagggaaatga
DBGET
integrated database retrieval system
