Trachemys scripta elegans (red-eared slider): 117883684
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Entry
117883684 CDS
T07347
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00260
Glycine, serine and threonine metabolism
tst00630
Glyoxylate and dicarboxylate metabolism
tst00670
One carbon pool by folate
tst01100
Metabolic pathways
tst01200
Carbon metabolism
tst01230
Biosynthesis of amino acids
tst01240
Biosynthesis of cofactors
tst04981
Folate transport and metabolism
Module
tst_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
117883684 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
117883684 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
117883684 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
117883684 (SHMT1)
Enzymes [BR:
tst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
117883684 (SHMT1)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
117883684
NCBI-ProteinID:
XP_034639164
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Position
10:6713558..6727673
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AA seq
486 aa
AA seq
DB search
MAHLTNVNGELPSTELWMSHNKMVMEPLDTSDPEVYDLIKKEKQRQRLGLELIASENFAS
RAVLEALGSCMNNKYSEGYPGQRYYGGTEFVDELEILCQKRALEAYGLDPRKWGVNVQPY
SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPTT
GYIDYDRLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADENGAYLLADMAHISGLVAA
GVVPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGARSMDPKTGKEIPYNLESLINQAVFP
GLQGGPHNHAIAGIAVTLKQAMTPEFKAYQCQVVANCKALSATMITLGYHVVTGGSDNHL
ILVDLRNRGTDGGRAERVLEVCSIACNKNTCPGDKSALRPSGLRIGTPALTSRGFREEDF
QKVAHFIHKGIELTLRIQNDMSPKATLKEFKERLVSDEKYQAALKSLKEEVETFAAAFPL
PGLPVL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctcacttaaccaacgtcaatggagagctccccagcactgaactctggatgtcccat
aacaagatggtcatggagccgcttgataccagtgacccggaggtgtatgacctcatcaag
aaagagaagcagcgccagaggcttgggttggagctgattgcgtccgagaactttgcaagc
cgagcggttctggaggccctgggctcctgcatgaacaataaatactcggaggggtacccg
ggacagaggtactacggcgggacggagtttgtggatgagttggagatcctctgccagaag
agggcgctggaggcttacgggctggacccacggaaatggggggtcaatgtccagccatac
tcaggctcccccgctaactttgcggtatacacggccctggtggagccccatggcaggatc
atgggtctggacttgcctgacggggggcacctgacccacggcttcatgacggacaagaag
aaaatctcggctacctcgatcttctttgaatccatgccctacaaggtcaatcccaccact
ggctatatcgactacgaccggctggaggagaacgcccgcttattccacccaaagttgatc
atagcaggcgtcagctgttactcgcgtaacctggactacgcccgcatgcggaagatcgcg
gacgagaacggggcttatctcctggccgacatggcccacatcagcggcttggtggcagcc
ggcgtggtgccgtcgccgtttgagcactgtgacgttgtgtcgaccacgacgcacaagacg
ctgaggggctgccgggccggcatgatcttctatcggaaaggagctcgcagcatggatccc
aagactggcaaggaaattccatacaacctggaaagcctcatcaaccaggctgtcttccca
gggcttcagggagggcctcacaaccatgccattgccggaatcgctgtcactttgaagcaa
gccatgaccccggaattcaaagcctatcaatgtcaggttgtcgcaaactgcaaggcgctg
tctgcaactatgatcacactgggctaccatgtcgtcactgggggctctgacaaccacttg
atcctcgtggacctgcgcaacagagggacggatggcgggagagccgagcgggtgctggaa
gtctgttccattgcctgtaacaagaacacctgtcctggtgacaagagtgccttgcgccca
agcggcctgaggattgggacaccagcgttgacctccaggggattccgggaagaggacttc
caaaaagtagctcattttatccacaaagggatagagctgacgctgaggattcagaacgac
atgagccccaaagcgacgctgaaggaattcaaggagaggctggtgagcgatgagaagtac
caggcggctctcaagtctctcaaagaggaggtggagacctttgctgctgccttcccgctc
cctggcctgcctgtcctttaa
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