Trachemys scripta elegans (red-eared slider): 117883743
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Entry
117883743 CDS
T07347
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117883743 (TMC5)
03037 Cilium and associated proteins [BR:
tst03037
]
117883743 (TMC5)
Transporters [BR:
tst02000
]
Other transporters
Pores ion channels [TC:
1
]
117883743 (TMC5)
Cilium and associated proteins [BR:
tst03037
]
Other cilia and associated proteins
Stereociliary proteins
117883743 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
z-alpha
DUF3740
Motif
Other DBs
NCBI-GeneID:
117883743
NCBI-ProteinID:
XP_034639332
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All DBs
Position
10:complement(17287489..17345743)
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AA seq
885 aa
AA seq
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MTYHYNEAFENPDYHYSETLEIDRSRERNSSFHQNLPESSLDDDSLYDSYEGRSGRGQRN
QDYPMAIPMASMQPGFQYSHSTSRSAGPNTNPYGNPYTNPSFEYEPELAYTSPSTFHAVD
DPYVRRSSDVSDGGSFSQRYNRRQADLVYRMPSSLLRLDSNAETYNKDKYKQEENLIKNL
ANMSSRERVKAIQKTPKTMKEKRDIRNKVLMEQTKKSVSSNTQINCCTQCLYKTALTYRR
FKNGLSEYLRLLQLWQKTLKVIRGKFGTSVLSYFVFLKWLLTFNIFSFLVNFSFITIPQL
IASGPNNLSFNGLELLTGAGYFKKTVLYYGFYTNSTITKTENNSSYNMQLAYIFTIGIYF
IICFFSLVYSMAKSFCKNFLNLQTYSGSAAKLLCIWDFNITNEKAVKLKQSNLSTQIKES
LSEVTLEVLNLSLKQKIARIAIHLVVWVASLGIAAACCAGVYYLSRNELQLLEGNKSELE
NEAATLVLPIVVSLLNLLIPFCFALFGLIEKFQYPRHQLYATIIRNVCLKISIIGILCYY
WLNDVATSEKECWESLVGQEIYRLIVIDFIFCLLGSFFGEFVRRIIGTKCCKKLGVPEFD
IARNVLDLIYTQTLAWIGIFFAPLMPAMQIISFFIIFYVKKVSLMRNCQPPRKVWRASQM
TTLFIFLLFFPSFTGVLSVMAITIWRLTPSKQCGPFQGLTSIIHAVSGWIHILDSYSSSK
WVVWIYRNLIGSVHFFFILTVIVLIITYLYWQIIEGRKIMVRLLHEQIINEGKDKMFLLN
KLRALQTSKLDPPKGEQQERSSSSYQPSRQAALQMTASLERPFGRNGRDFYAESSSAGIP
EKTGLSPADEEGHQPGISETLALALRARQQAEWEMEDDNDEDFRP
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgacttatcactataatgaagcttttgaaaacccagactatcactactcagagacattg
gagattgacagaagcagagaaaggaattcatcctttcaccaaaaccttcctgagtcctcc
ctggatgatgactcgttgtacgattcctatgaaggtcgcagtggaagaggacaaagaaac
caggattatcccatggctataccaatggcctcgatgcagcctggcttccaatacagccac
agcacatcgaggtcggctgggcccaacacaaatccatatggaaatccatatactaatcct
tcctttgagtatgagccagaattagcatacacatctccctccacctttcacgccgtggat
gatccttacgtacgcagatcttctgatgtgtctgatggaggtagcttcagtcagagatat
aacagaagacaagctgacctggtctacaggatgccttccagccttctcagactagactca
aatgcagaaacgtataacaaagacaaatataaacaagaagaaaacttgatcaaaaatctt
gcaaacatgtccagcagagagagagttaaagcaatccagaagacaccaaagaccatgaaa
gaaaagagagacatcaggaataaagttctcatggagcaaacaaaaaaatctgtgagctcc
aatactcagattaactgttgtacacagtgtctgtacaaaacagcattgacctatcggcga
tttaaaaatggcctgtcagaatatttgcgcttattgcaactatggcagaagactctgaaa
gtcatccgtggcaagtttggaaccagtgttctttcctattttgtttttctgaagtggtta
ctgactttcaacatcttctcattccttgtaaacttcagcttcataacaatcccacagctt
atagcatcaggaccaaataatctttcgttcaacggtctggagcttctgaccggggctggt
tattttaaaaaaacagtgctctactacggtttttacaccaactctacaatcacgaaaact
gagaacaattcttcctataacatgcagctggcctatattttcactattgggatttatttc
atcatctgcttctttagcttggtgtacagcatggcaaagtccttctgtaagaacttcctc
aatcttcagacttactctggaagtgctgccaagcttctctgcatctgggacttcaatata
accaatgagaaagctgtgaaactgaagcaaagcaatctcagtacacaaataaaggaatcc
ctgtctgaagtgaccctcgaggtactgaacctttctctaaagcagaaaattgctcgtatc
gctattcatctggtggtttgggtggcttccttgggaatagcagctgcttgttgtgctggt
gtttactacctctcaagaaatgaactacagctcctggaaggtaacaaaagtgagctggaa
aacgaggctgccacgctagtgctgcccattgttgtgtctctcctcaacctcctcatcccc
ttctgcttcgccttgtttggactcatagagaaattccagtatcccagacatcagctctac
gccactattatcaggaatgtttgtctgaaaatatcaataattggaatcctctgctactat
tggcttaacgatgtggctacgtcagagaaagagtgctgggaaagcctagttggccaagaa
atctaccgtctcattgtgattgacttcatattttgcttgcttggttctttctttggagaa
tttgtacgaagaatcattggaactaaatgttgcaaaaaacttggagtgccagaatttgat
attgcacgaaatgttttagacttgatctacacacagactttggcctggattggcatcttc
ttcgcacctttaatgccagccatgcagattatatcattttttataatattttatgtaaaa
aaggtcagtctgatgaggaattgtcaaccacctcgcaaagtctggagagcttctcagatg
acaacactcttcatttttctgctgtttttcccttcctttactggagtcctgtctgtaatg
gcgatcactatctggaggctgacgccttctaagcagtgtggtccgttccaaggcttgact
tccataattcatgccgtttctgggtggatacacatattggacagctattccagctcgaaa
tgggtggtgtggatttatcgtaacttaattggaagcgtgcatttcttcttcatcctcact
gtcattgtcctaattatcacatatctttactggcaaataatagaaggaagaaagataatg
gtcagactcctgcatgagcaaattattaatgaaggaaaggataaaatgtttttacttaat
aaactacgtgcactgcagacatcaaaactagacccacccaaaggagaacagcaagagagg
agttcatcttcgtaccagccatctagacaagctgctctgcaaatgacagcctccctagaa
aggccatttgggagaaatggaagagacttctatgctgagtcctcctctgctgggatacca
gaaaagactggcctgtctcctgcagacgaagagggacaccaaccagggatttctgagact
ctggcactggctctgagagccagacaacaggctgaatgggaaatggaggacgacaatgac
gaggactttagaccatga
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