Trachemys scripta elegans (red-eared slider): 117883796
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Entry
117883796 CDS
T07347
Symbol
TP53BP1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117883796 (TP53BP1)
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
Tudor_5
BRCT_2
DUF4537
SH3_Hsr9
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
117883796
NCBI-ProteinID:
XP_034639443
LinkDB
All DBs
Position
10:85507534..85577850
Genome browser
AA seq
1978 aa
AA seq
DB search
MDPSQSQLDLGFSQQDTPCLIVEDSQPESAVIEDTAHGCLRLLALPLPNCQSPVLVSNEE
REMQKSGTCVLQEIMTSPQGSKLAAGGGGEDRGHEEKPLTESTDSSTHLDTTGSLSQVID
RLPQPTKNNRVPGIVAAAAEEAGEDASHCTTHLPGAEDSGTSQLGFGALELSQSQDFEGD
STLSEEGRGHQLQPAGTVPICSNPMRNDPNEELHIVRSEALSTGESYTGVPCQQEKSGRS
EVMSSSPRIPQQHKEISRIQMSVCNTLESELPAEKRPDPCLQESEILSTQEDMFSQSHTT
ASESDCTITRVEVGGSVACTPAGTLHLLHLSGQGSLGQESLSTYSSGLITPSPGAFGSHP
LIIPSSPTEQEETKDEQMDISAPAEGGDLLQEKQRGDEPVEVGNPPLPPGPHVLPQVSTP
VSQSAPAFVPGSFPIPSQPEFSHDIFISTPSLEEKPSGEEKGGVLPGSCLPADVSETTEA
LPKIPTGDPELSCKLVLSASECSQPIRTEGNTSSLKINQDSENTQTEMDSTLQASELKPY
STESYSMQLRLSEDSQAPLSENCEKLKREAVWATGEPTICPVAEGVAAEGSVAQMACIDL
TCDSGSQTAATLSVQSETSSHTLGQEALTEIKEELSGEASEFEAVPRTLCEEQGGERQAE
EKQLNEEGSFDPLTLSQGLILLRETQEHEGQEVMEVESSEAFGKNSEKLCDLSHGLVQMD
LETRKKETSKDFNVVTEVKSMKDLSLKAAPEDVPKLSEVPPQPFVGESLQQQESSWPQVK
VDVAPGLASCAKKCPGSQGNRSQAEGDLELKQVQKDEQPPPAPLERGVEVPATPQESQQP
LLMTLEKAADMPEKPFKTSNLEQEEERATEQSPCLSSGTLFHFTLPKEGDVIQPLTSVTP
SLIGQLKMGPRRHSTPIVDGSCPNRTIVTSDVTAEGSIGTNDVTVESAMASADALEECEK
GDSGAALEADGKLCLRMSLATPVSEESEGSLPFSLEKPAASERKNGSSAVAGAVASSQKT
LSVFSRVCEVRREDEARGHDLPASPFRGNLFSFPSTQEEEEEELHDNPEAWQQRQKHIPC
GEIKVSQPAEQDSKHQPSHAKEGEAMEVDIERDLEKEGKSTQEKLSKALATHERDKGQQL
WAGTSNKEVQTTEGSVLAPAAVSAATQTMTGVSSQVEVGTSMAGQRPGQQDAKVQTEESG
EKLANAPGDDTESLPSQGEEEFNLPQPPRGRVQHRHMRTIREVRTVVTRIITDVYYVDGA
EVERKVTEETEEPIVDCQESETDISPSRTTGGSSLTSGDLGDISSLSSKVSSLHRTSSGA
SSGMSATHGGSSSGRGAGSFKGKVSGMEAGEFALPSGRGVLGKLSPRKGAGQPGSPLRAG
QTGATACEEDEDPALGIRQGGKAPLTPRGRGRRGRPPSRATGTRDAAGSGLLGVEDISTT
ASPEEKPFVRIVVRPPDGGDRFDAAGPCTLRRSDSPEIPLQVVAGPSDSADLSSGSSFVG
LRVVAKWSSNAYFYSGTITQDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLETEVTALS
EDEYFSAGVVKGHRKESGELYYCIEKEGQRKWYKRMAVILSLEQGNKLREQFGLSPYEPI
TPLTKAADISLDNLVEGKRKRRSNFGSPSTSSSSTTPTRKGLESPRVAPGLLSGKRKLIA
SEDERSPAKRGRKSAAMKPGAVRAGEFVSPCESGDHTGDPSMLEEHHGPLPHNKTLFLGY
AFLLTMATPSDKLAIHQKPSDGPAGSSEEEEEFSIPYNKEYTALQLRTGAGYILEDFNET
QCNAAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVRDSCHANQLQNYCNYLLPAGYSL
QEERLLEWHPRENPFGNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHYSNAQNKDIAL
GVFDVVVSDSSCPAAVLKCAEALRLPVVSQEWVIQSLIAGERVGYNKHPKYKHDYGPC
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atggaccccagccagagccagctagatttaggcttctctcagcaggacactccctgcttg
atagttgaggactcccagccagagagtgcagtgatagaggacactgctcatggctgcctc
aggctgctagccctacctcttcccaactgccagagcccagtactggtgtctaatgaagaa
cgggagatgcagaaatcaggtacatgtgttttacaggagataatgaccagtcctcagggt
agcaaactggctgctggtggaggaggagaagacagaggccatgaggaaaagccgctcaca
gagtccacggacagttctacccatctggacacgactggttcactcagccaagttattgat
cgattgcctcagcctaccaagaacaacagggttcctgggatagtagcagctgctgctgag
gaagcaggtgaagatgcctcacactgcactacccacttgccgggtgctgaagattctggc
acatcgcaattgggttttggagctctggaactctcacaaagccaggacttcgagggagac
tcaacattgagtgaagagggcagagggcaccagcttcagccagcaggcactgtccctatc
tgttctaatcccatgaggaatgaccctaatgaggagctgcacatagttaggagtgaagct
ctgtccactggagaaagttacactggtgtaccgtgccagcaagagaagtctggaaggtca
gaggttatgtctagctctcccagaattccacaacaacacaaagagatcagcaggatacaa
atgtctgtctgcaacacgcttgaaagtgagttgcctgctgagaagagacctgatccttgt
ctgcaggagtcagagattttgtcaactcaggaagatatgttttcccagagccacacaaca
gcttcagagagtgactgtaccataaccagggtggaagtgggaggttccgtggcatgcacc
cctgctggcactctgcacctcctgcatctctctgggcaggggtcccttggtcaggagagt
ctttccacttattcttcaggcctaattactccttctcctggtgcctttggatcccatcct
cttatcatccccagcagtcccaccgaacaggaagaaacaaaagatgagcagatggatata
tctgctccagcagaaggaggagaccttctacaggagaagcagagaggagatgagccagta
gaggttggcaatccacctctcccaccaggaccgcatgtactaccacaggtttcaactcct
gtatcccagagcgccccagcctttgttcctggatccttccctataccatcacaaccagag
ttttcccatgatatttttatttcaactccgagtctggaggagaagcctagtggagaagag
aagggtggagttttaccgggttcatgtttgccagcagatgtctctgaaaccacagaggct
ctgccaaagatccccacaggagatcctgaattgtcctgtaagctagtactctctgcaagt
gaatgcagtcagcccattaggacagaaggcaacacaagctctctgaaaatcaaccaagac
agtgaaaacacacagactgagatggattctacactgcaagcttcagagctgaaaccctat
tccacagaaagttacagcatgcaactaaggctgagtgaggacagccaagccccgctcagt
gagaactgtgaaaagctgaaaagagaggctgtgtgggctacaggagaacctaccatttgt
cctgttgctgaaggtgtagcagcagaagggtctgtagcacagatggcttgcattgatctc
acatgtgattctggaagccagacagctgcaactctgtctgttcagtctgagacttcatca
cacactctgggtcaagaagcattgactgagatcaaggaagagttatcaggagaggcgtct
gagtttgaagcagtccctaggactctatgtgaggaacaaggaggagaaaggcaggcagaa
gagaagcagctaaatgaagagggatcctttgaccctctaactctgtcccaggggctgatt
cttctaagggaaacgcaggaacatgaaggccaggaagtgatggaagtggaatccagtgag
gcttttggcaaaaactcagaaaaactatgtgacctgagccatgggttggtacagatggat
ctagagaccaggaaaaaagaaacatctaaagattttaatgtggtcactgaagttaaaagc
atgaaggatctgtccctgaaggctgctccagaagatgtgccaaagctcagtgaagttccc
cctcagccttttgtgggagagtcattgcaacagcaggaaagctcatggccccaggtaaag
gtggatgttgccccaggattagcatcatgtgccaaaaagtgtccaggcagtcaaggaaac
aggagtcaagctgaaggtgacctggaattgaagcaagttcagaaggatgagcagccacct
ccagctcctttagagagaggggttgaagtgccagcaacaccgcaggagagccagcagcca
cttctgatgaccttggagaaggcagcggatatgcctgaaaaaccatttaaaacaagtaat
ctggagcaggaagaggagagggcaactgagcaatccccctgtctatccagtggaacgctg
tttcatttcactttgccaaaggaaggtgatgtcattcagcccttgaccagtgtgaccccg
tctcttattgggcagcttaaaatgggacccagaagacacagcactcctattgtggatggc
agctgcccaaatagaaccatagtaaccagcgatgtcacagcagagggcagtattgggacc
aatgatgtcactgtggagagcgctatggcatcagcagatgcgttggaagagtgtgaaaag
ggggattctggtgcagctcttgaggctgatggaaaactctgtcttcgaatgagccttgct
acccctgtgagcgaggagagtgaggggagtctgcccttcagtctggaaaagcctgcagcc
agtgaaaggaaaaatggatcctctgctgttgctggggctgttgccagctcacagaagaca
ctgtctgtgtttagtcgtgtctgtgaagtccgacgagaggatgaggccagaggtcatgat
cttcctgcttctccatttagggggaatctgttcagtttcccaagcacacaggaggaggag
gaggaggagctgcatgacaatcctgaagcttggcaacaacgtcagaagcacatcccttgt
ggggaaattaaagtttctcagcctgcagagcaggactccaaacatcagccatcccatgca
aaagagggagaggctatggaagttgatattgaaagggatctggaaaaggaagggaagagc
acacaggagaagctgagtaaggcactggcaacccatgagagggataaaggccagcagttg
tgggctggcaccagtaacaaagaggtccaaactacagaaggttctgttttggccccagca
gctgtgtcagcagcaacacagaccatgacaggagtgagcagtcaggtagaagtgggaaca
agtatggctgggcaaagacctggccaacaagatgccaaggtccaaactgaggagagtgga
gagaagcttgcgaatgcccctggagatgacactgagtctctgcccagccagggagaggag
gagtttaacctgccccagccaccccgaggccgcgtccagcatcgccacatgcgaaccatc
cgtgaagtgcgcacagttgtcacacgtatcatcacagatgtttactatgtagatggtgct
gaggtagagcggaaggtgactgaggaaactgaagagcccatagtggattgccaggagagt
gagacagacatctccccctcccgaacaacagggggctcgtcactgacctccggggacctt
ggtgatatcagctccctttcatccaaggtctcgagtctccatcgtacatctagtggagcc
agtagtggcatgtcagctacacatggtggcagtagctcagggaggggagctggatctttc
aaagggaaagtcagcggaatggaagctggagagtttgccttacccagtggtagaggagtc
ctaggaaaattgagccctagaaaaggggctggccagccagggtcccctctcagggccggt
cagacaggagcaacagcatgtgaggaggatgaagacccagcacttggcattcgacagggt
gggaaagcacctcttacaccccgtgggcgagggagaaggggccgcccgccatctcgagca
actggaacaagggatgcagctgggagtggcctgctaggggtggaagatatctcgactaca
gcatcaccagaggagaagccctttgtgcgcattgtggttcgcccaccagatggtggggac
agatttgatgctgctggcccttgcactttgcgccgaagtgactctccagaaattcccttg
caggtggtggcaggtccctcggacagtgcggacttatcctctggaagcagctttgtgggc
ctgcgagttgtagccaagtggtcctcaaatgcctacttctattctgggacaatcacccag
gatgttggggcagggaagtacaagctgctgtttgatgatggatacgagtgtgatgtctta
ggcaaagatattttactctgcgatcccattccactggaaactgaggtgactgcgctctct
gaggatgagtatttcagtgcaggtgtggtgaagggacaccggaaggagtctggagagctg
tattactgtattgaaaaggaaggccagaggaaatggtacaagcgtatggcagtaatcctg
tccttggaacaaggaaacaagcttcgggagcagtttggactgagtccgtatgaaccaatc
acacctctgaccaaggcagctgatatcagcctagataacctggtggaggggaagcggaag
cggcgcagtaactttggctcacccagcacttccagcagcagcactacacccactcgcaaa
ggactggagagtccgcgtgttgccccaggcctgctgtctgggaagaggaagctaattgcc
tccgaagatgagagatccccagccaaacgagggcgcaagtctgcagcaatgaaacctggg
gctgtgagggcaggtgaatttgtgagcccttgtgaaagtggagatcacacaggagatccc
tcgatgctggaggagcatcatgggccattgccccacaacaagaccctctttctgggctat
gctttccttctcactatggcaacccccagtgacaaactggctattcaccagaagccatca
gatggtcctgcaggaagtagtgaggaagaggaagaattctcaattccttacaacaaagag
tacacagcattgcagctgcgaactggagccggctacatcctggaggacttcaatgaaacc
cagtgtaacgcggcatatcagtgtctcctgattgcagatcagcactgccgaacccggaag
tacttcctgtgccttgccagtggaattccctgtgtatctcatgtctgggtccgtgacagt
tgccatgctaaccaacttcaaaactactgtaattatcttctcccagctggctacagcctc
caagaggaaaggctgctggagtggcacccccgagagaacccctttggtaacctgaaggtt
cttctggtatcagatcaacagcagaacttcctggagctctggtcagaaatcctcatgaca
gggggagcagcatcagttaaacaacattactcgaatgcccagaacaaagatattgctttg
ggggtgtttgatgtggtggtgagtgactcgtcctgcccagctgctgtcctgaagtgcgcg
gaagcgttacggctgcctgttgtgtcgcaggagtgggttattcagagcctcattgctggg
gagagagttggctacaacaagcatccaaaatacaaacatgactatggcccctgctaa
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integrated database retrieval system
