Trachemys scripta elegans (red-eared slider): 117883906
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Entry
117883906 CDS
T07347
Symbol
USP8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04137
Mitophagy - animal
tst04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117883906 (USP8)
04137 Mitophagy - animal
117883906 (USP8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117883906 (USP8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117883906 (USP8)
04121 Ubiquitin system [BR:
tst04121
]
117883906 (USP8)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117883906 (USP8)
Peptidases and inhibitors [BR:
tst01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117883906 (USP8)
Membrane trafficking [BR:
tst04131
]
Endosome - Lysosome transport
Others
Others
117883906 (USP8)
Ubiquitin system [BR:
tst04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117883906 (USP8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Adhesin_P1_C
Metallothio_Pro
Motif
Other DBs
NCBI-GeneID:
117883906
NCBI-ProteinID:
XP_034639651
LinkDB
All DBs
Position
10:complement(66903757..66941546)
Genome browser
AA seq
1119 aa
AA seq
DB search
MPAVASVPKELYLCTSLKDLNKKTEIKAEKTSTKNYVQSALKIFKAAEECRLDRDEEKAY
VLYMKYVTVYNLIKKRPDFKQQQDYFHSILGPTNIKKAIEEAERLSESLKLRYEEAEVRK
KLEERERQEEQQKKQEVKDDGKALAKHTSENAVDSKGKNQRINGEKKGSVERKDQVDRLS
VPVSQGAITAEKLFPMMMDKNIELLIMDARSLKDYQESCIPNSISVPEEAISPGVTANWI
EAKLPDSSKDPWKKRGHVDYVVLLDWFSSARDLQLGTTLRSLKDALFKWESKTILRSEPL
VLEGGYETWLLCYPQHTTNAKVTPPPRGKSEAVSVSLDFTYPSLEEPAPPPPPVVHIKPT
PVEVTENDEMGSNQEGRTGSHNTPTPSAPVAATPQTDGSHVVHPVYAVINIPQIDRTKKP
SAKFLDDDNSPKSEGTTLDKHPVQNGRMIPDRSTKPPFEAKTMLPEEEKSRIHAETASML
EKSKREKELRERQQEKQRDILKLEKQKQEEKEHREKLQQAKEERERRQEEDQAIREQKEK
EEQERACKEVLEAKRQNKTEHENTAAKKPELDKVSAEEREKGTRTPEMQRRALGDTSVTG
VSVSSKHTGVKGQPESGAQREDTEQDTERLKSQREPLMRARSEEMGRIVPGLPAGWAKFL
DPITGTFRYYHSPTNTVQLYPPEMAPSSTLPSTPPTHKAKPQVTAERDRELSKLKRSYSS
PDITQAIQEEEKKKIPVTPAISRENKPVCYTKAEISRLSAPQIRNLNPVFGGSGPALTGL
RNLGNTCYMNSILQCLCNAPLLADYFNRNLYQDDINRLNLLGHKGEVAEEFGIIMKALWT
GQYRYISPKDFKITIGKINDQFSGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENND
HLDDFKAAELAWHKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLAST
SKCTLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKLEIWKLPPVLLVHLKRFSYDGR
WKQKLQTSVDFPLESLDLSQYVIGPKSNLKRYNLFSVSNHYGGLDGGHYTAYCRNATKQR
WYKFDDHEVSEISGSSVKSSAAYILFYTSIELRGADIAT
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgtggcttctgtacctaaggaactgtacctctgtacttcactgaaagatctt
aacaagaaaacagaaataaaagccgagaagaccagtacaaaaaattatgtgcagagtgcc
cttaagatcttcaaggcagcggaggaatgcaggttggacagagatgaagaaaaggcctac
gtcctatatatgaaatatgtgactgtatataatcttattaaaaaaagacccgatttcaag
caacaacaggattactttcattctatactgggacctacaaacataaaaaaagctattgaa
gaagctgaaagactctcagagagtctgaaactgagatatgaggaagctgaagttcggaaa
aagcttgaagaaagagagagacaagaagagcagcagaaaaagcaagaagtaaaagatgat
ggaaaggctttagccaaacacacttcagaaaatgcagtagattccaaaggaaaaaaccaa
aggatcaatggtgagaagaagggttcagtggaaagaaaagatcaagttgacagattgagt
gttcctgtatctcaaggagcaatcactgctgagaaactgtttccaatgatgatggacaaa
aacatcgaattgctcataatggatgctcgaagcttgaaagattatcaggaatcctgtatt
ccaaattccatcagtgttccagaagaggctatcagtcctggagtcactgctaattggatt
gaagctaaactcccagatagttctaaagatccatggaagaagaggggacatgttgattat
gttgtactgcttgactggtttagttctgcaagagacttgcagctaggaacaactcttcgg
agcctgaaagatgcactttttaagtgggaaagtaaaactatactgcggagtgagccttta
gtcttagaaggaggttatgagacctggcttctttgctatccccaacacacaacaaatgct
aaagtaactccacccccacgtggcaagagtgaagctgtgtctgtctctttggattttact
tatccctctctggaagagccagctcctcctccaccacctgttgtccacataaagcccact
ccagtagaagtgactgagaatgatgaaatgggaagtaatcaagaggggaggacaggatca
cataacacaccaactccaagtgcaccagtggctgctacccctcaaactgatggttcacat
gtagtccacccagtatatgcggtgataaatatcccacagattgatcgtactaaaaagccc
tcagcaaaatttcttgatgatgataatagtccaaaatctgaaggtacaactcttgacaaa
catccagttcagaatggaagaatgattccagatcgttccacaaagccaccgtttgaagca
aagaccatgctgccagaagaagagaaaagccgcatacacgcagaaacagcttccatgttg
gagaagagcaaacgggaaaaagaattgcgggaaagacaacaagagaaacaaagagatatt
ctcaaattggagaagcagaaacaggaagaaaaggagcaccgagaaaaactacagcaagca
aaagaagagagagaaaggagacaggaggaagatcaggcaattagggaacaaaaggaaaag
gaagaacaagagagagcatgcaaagaagtattagaagcaaaaagacaaaataaaactgaa
catgaaaacactgctgcaaaaaaacctgagcttgataaagtatccgcggaagaaagagaa
aaggggactcgaacaccagaaatgcagaggcgtgcgttaggagatacatctgtgacaggg
gtgtcagtctcaagcaagcacactggggttaaaggacaaccagaaagtggagctcaaaga
gaggatactgaacaagatactgaaagacttaaatcccagcgagagccgttgatgagagca
cgaagtgaggaaatggggaggatagtaccaggattgcctgcaggctgggcaaagtttctg
gatccaatcactggaacatttcgttattaccactcgccaacaaataccgttcagctgtat
cccccggaaatggctccttcatccacccttccatccactccaccaactcataaagccaag
ccacaggtgactgctgaacgggacagagaactctccaaattgaagcgatcctactcttca
ccagacataacccaagccattcaggaggaagagaagaaaaaaattcctgtaactcctgca
atcagtcgtgaaaataaaccagtatgttacactaaagctgaaatctcaaggctctctgca
ccacagattcgtaatcttaaccctgtgtttgggggatcgggaccagctctcacggggctt
cgtaatttagggaacacttgctatatgaactctatattacagtgtctctgcaatgcacca
cttctggctgattatttcaatagaaatttgtatcaggatgacattaacaggttaaatctc
ttggggcataaaggcgaagtggcagaagagtttggcatcataatgaaagcattgtggaca
ggacaataccgatatatcagtccaaaagattttaaaattacaattgggaagatcaatgac
cagttttcaggatacagtcagcaagactcccaagaattgctcctgttcttaatggacgga
ctgcatgaagacctaaataaagctgacaatcggaagaggtataaggaagaaaataatgat
catcttgatgacttcaaagcagcagaactagcctggcacaaacacaagcagctcaatgaa
tctattattgtggcactttttcaaggccagttcaaatctacagtgcaatgtcttacgtgt
cacaaaaagtcccgaacgtttgaggctttcatgtatttgtcattgccacttgcatccact
agtaaatgtacactacaggaatgccttagattattctccaaagaggagaaacttacagat
aacaacagattttactgtagccattgcaaaacacgaagggattctttaaaaaaattagag
atttggaaattgccacctgttcttctggtgcacttgaaacgattctcctatgatggaagg
tggaagcaaaagctacaaacatctgtagatttccctttggaaagtcttgacctgtcacag
tatgttattgggccaaagagtaatttgaagagatacaacctattttcagtatcgaatcat
tatggagggttggatggagggcactacaccgcttactgcagaaatgctacaaaacagcgc
tggtataagtttgatgatcatgaagtatctgagatctcaggatcctctgtgaagtcctca
gctgcatatattctcttttacacttcaattgaactgcgaggagcagatatagccacataa
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integrated database retrieval system
