Trachemys scripta elegans (red-eared slider): 117883939
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Entry
117883939 CDS
T07347
Symbol
DENND4A
Name
(RefSeq) C-myc promoter-binding protein
KO
K20163
DENN domain-containing protein 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117883939 (DENND4A)
Membrane trafficking [BR:
tst04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117883939 (DENND4A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
117883939
NCBI-ProteinID:
XP_034639758
LinkDB
All DBs
Position
10:complement(79654321..79773640)
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AA seq
1885 aa
AA seq
DB search
MEDKGARVADYFVVAGLTDISKPLEEEIHFNDACHKIAKPKEPITDVTVIIKSLGEEVPQ
GYKCIDVTPSGLSADLNNGSLVGPQIFLCYRRGRDKPPLTDLGVLYDGKERLIQGCEIIQ
ATPSGRPANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGESPPHTFCKVDK
NLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPEEDYESFPLPESVPLFCLPMGASI
ECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYEPYPEENLTEKQKSQLGLATTGDGK
SDNSKTVQSNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPS
PQRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILI
HSLRPSVLTSVTEALVSMIFPFHWPCPYIPLCPLALAAVLSAPCPFIVGIDSRYFDLYDP
PPDVSCVDLDTNTISQTGDKKTISWKTLPKKPCKNLMNTLNNLYQQLAELQQRPREDALM
ELTMNDYDFNSGKKLHLLDMEIQEAFLCFMASLLKGYRSYLRPITQAPSETATDASSLFE
LQGFLKSRDRSHQKFYTSMTKTQMFIRFIEECSFVSDKDASLAFFDDCVNKVDMDKSGET
RLIELDESYKSEHTVFITPPEIPHLPNGEEHPLQYSYNGFPVLKLDLFDQPEGFLTTPNN
KLSSKASSPNSPSPMFRRTKQEIKSAHKIAKRYSSVPQMWSRCLLRHCYGLWFICLPAYV
KVCHSKVRALRTAYDVLRKMHTKKIDPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMKKAG
IDPNAITYGYYNKAVLESTWPSSSRSGYFLWTKIRNVVLGIVQFKKALKKLPANTPQAAL
SGGLSDLGSNLLSKEEFGQGETSVQDIKKQKEDKRESDSSSLSETESAKGSGDYLPKLNY
QNSSSTSIQVAKATSNIVRLNGTIDNADSTAGEVSTESPAGLLFTSAFEGTNEAGVLQSK
TLRKRHKSAVEPDLKQMAWGSRNRNLSGDALMGLMINRINQNASPGDIVEKLGADAKILS
NVFQKSIRPNSLDIRKSSLGSKRESMEKESSDEDAPFYGSFVDKTESPVIFDLEDLDAEP
DTAKTVKSSNEKPKMLQRNSSFLIKPVEKTDVETGFDPLSLLVAETEQRKEDDEDDDDKS
VSTPSARRDLAEEIVMYMNNMSSPLTSRAPSIDLQKTYDDRNVSKKSPTVTQPCRRSSLP
PYSPRPVSLIKSKSYHIKNEERPRDRLWSSPSYSPAREQSQDMAGALTLVSPPSFNLDTL
LTPTFDVLKSSMFSAGKGVAEKASKWYSKFTMYAASSKDQNSDRASVSSLGILDSESTSL
TDEDVCNDFEGTSSPQENNDTSVIKGIGLSRTSLESSASHDGSSKQFYHCGSLSKFPLPD
KSELMSSCSTSSTSVFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPF
CGNLFLPFLNIEIRDLRRPGRYFLKSSLSTENMQLPSPFSNQTGKSCISTPTSCLATSVM
PVQDDFISKCKSKQQDNSCARSIQIPSGRRQNVAGSECPSHAVARSVSTYGPLEEDEKGS
RKLSHIVPTGSLPTTLQGTTDSLGLEWRLCSPDPITVPYLSPLVVWKELESLLENEGDRV
ITVADFVDHHPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRNCMSEDSKYVLI
QMLWDNMKLHQDPGQPLYILWNAQTQKYPVVHLLQKDDDSFNQELLRSMVKSIKMNDVYG
PMSQILERLNKWPQIKRQRSLYREILFLSLVALGRENIDIDAFDREYKMAYDRLTANQVK
STHNCDRPPSTGVMECRKIFGEPYL
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaggcgctcgtgttgctgactactttgttgtagcaggattgacagatatt
tcaaaaccactagaagaagaaatccacttcaatgatgcttgccataaaatagctaaacca
aaagaacccatcactgatgtgacagtaattattaaatctcttggggaggaagtgcctcag
ggatataaatgcatagatgttactccatcaggactatcagcagatctcaacaatgggagt
cttgtgggtccacagatattcctttgctacaggagaggaagggacaagcctccacttact
gatctgggggttttatatgatgggaaagagagattaatacagggctgtgaaatcattcaa
gccactccatctggtcgtcctgcaaacattagtggcagtgcctcatcacaaagagtatac
atcacttaccgaagagcctccgaaaatatgacccaaaacaccttggctgtcacagatata
tgtataattataccgagtaagggagagagccctccacatacattctgcaaggttgacaag
aatcttaataacagtatgtggggctcagcagtatacctatgttacaaaaagtctgtggca
aaaaccaataccatatcatataaagctggtttaatatgcagatatcctgaagaagactac
gagtcattcccattaccagaatcagtgcctcttttttgtctacccatgggtgcatctatt
gagtgttggccatctaacagtaaatacccccttccagttttttctacatttgtactaact
ggagcttcggctgaaaaggtatatggtgctgctattcaattctatgaaccatatcctgag
gagaatctcacagaaaaacagaaatctcagttagggttagcaactactggagatggaaag
tcagataactccaaaacagttcagtctaacaaatgcatttgtctgctctctcactggcct
ttttttgacgctttcaagaagtttcttacctttctttatcgttattccatctctggtcct
catgtcctccctattgagaaacatatttcacattttatgcacaaagttccttttccatcc
cctcagagaccaagaattttagttcagctatcgccacatgataacctgattcttagtcag
ccagtgtcatcacctctaccactgagtggtggcaagttttctacactgcttcagaaccta
gggcccgagaatgcagtaactctacttgtatttgctgtaacagaacataaaattctcatc
cattccttacgaccgtctgtccttactagtgtgacagaggcattagtctcgatgatattt
cctttccattggccatgcccatacattcctctttgccccttggcactggcagctgtgtta
agcgcaccatgtccattcatagtaggaattgattcaagatactttgatctgtatgatccc
ccaccagatgttagctgtgttgacctagataccaacaccatttctcaaactggagataag
aaaactatttcatggaagaccttaccaaagaaaccttgcaaaaatctaatgaacacttta
aataacttgtatcaacaactggcagaattgcagcaaagaccaagagaagatgcattaatg
gaattaacaatgaatgactatgattttaattcggggaagaagttgcatttgttagatatg
gagatccaggaggcatttctttgtttcatggcttcattattaaaaggttataggtcatac
ctaaggccaataacacaggcgccttctgagacagcaacagatgcaagttccctctttgaa
ctacaagggttcttaaaaagtcgagatcgatcacatcaaaaattctacacatcaatgacc
aaaactcaaatgtttattcgcttcattgaagaatgttcctttgttagtgataaggatgca
agccttgcattttttgatgattgtgtaaataaagtagatatggacaagagtggtgaaaca
cggcttatagagctggatgagtcctacaagagtgaacacacagttttcataacaccacct
gagatccctcacctacctaatggcgaagagcaccctttgcagtacagctataatggattt
cctgtgctgaaactagatttgtttgaccaacctgagggattcctgactacaccaaataat
aaactgtcttcaaaagccagtagtcccaacagcccatccccaatgttcaggagaacaaaa
caggaaataaagtcagcccataagatagctaagaggtactcctccgttcctcagatgtgg
tccaggtgtttgctgcgtcactgctatggcctatggttcatctgccttcctgcgtatgtg
aaagtgtgccattcaaaagtcagggctctgagaactgcatatgacgtgctgcgaaaaatg
cataccaaaaagatagacccccctgatgaggtatgttaccgggtgcttatgcagctatgt
gggcaatatggccagcctgtgcttgcagtgagagtcctttttgaaatgaaaaaagccggt
attgaccctaatgccattacatatggttactataataaggctgttttggaaagcacctgg
ccttcaagtagtagaagtggctatttcctatggacgaagatcagaaatgttgtattagga
atagtgcagtttaaaaaagctttaaaaaaactacctgccaacacaccacaagcagctctt
tccgggggactttcggatcttggcagtaacttgttatctaaagaagaatttgggcaaggg
gaaacatctgttcaagatataaaaaaacaaaaagaggacaagagagagagtgattccagt
tctttgtctgaaacagagagtgcaaaaggaagtggtgactatcttcccaagctaaattat
caaaattcaagtagtacttcaattcaagtagcaaaagccacttctaacatagtacgactc
aatggtaccattgataatgctgacagtacagctggggaagtcagcactgaaagcccagca
gggctgcttttcacatccgcttttgagggtaccaatgaagcaggagttcttcaaagtaaa
accttaagaaagagacataaaagtgctgtggaacctgacctaaaacagatggcatgggga
agcaggaaccgtaatctgagtggagatgccctgatggggctcatgataaatagaattaac
cagaatgcaagccctggagacattgtggaaaaattaggagctgatgcaaaaatactgtct
aatgtattccagaagagcataaggccgaatagtcttgacattaggaagtcatctttaggg
tctaagagagagagtatggagaaggaatctagtgatgaagatgcacctttctatggcagt
tttgtagataaaacagagtctcctgttatctttgatttagaagacttagatgctgaacct
gacacagctaaaacagtaaagtcgtctaatgaaaagcctaagatgttacagcgtaatagc
agctttctaataaaaccagttgaaaaaacagatgtggaaactggatttgatcccctctcg
ctgctggttgctgagacagaacaacggaaagaagatgatgaagacgatgatgacaaaagt
gtttcaacgccatctgcaaggcgagatttagctgaagaaatagtgatgtacatgaacaac
atgagcagccctttgacaagccgtgcaccaagcattgacttgcaaaaaacatacgatgac
agaaatgttagtaaaaagagtccgacagtcacccagccatgcagaagatccagccttccc
ccatattcccccaggccagtgagtcttatcaaatccaaaagttaccacataaaaaatgaa
gaaaggccaagggacaggctttggtcctctccatcttacagtccagcgagggaacagtcg
caggacatggctggtgcattaactctagtgtctccaccttcgttcaacttagatacacta
ttaacacctacatttgatgttctgaaaagcagcatgttctctgctgggaaaggcgttgca
gagaaggctagcaagtggtattcaaagtttactatgtatgctgcatcctcaaaggatcaa
aattcagaccgagcaagtgtttcatctcttggaattctggattcagaatctacctctcta
actgatgaagatgtctgcaatgactttgaaggtacttcttctcctcaagagaacaatgac
acctcggtaattaagggaattggtctaagtaggacaagcctagaaagttcagcttctcat
gatggctcatccaagcaattctatcactgtggttccctttcaaagttccccttgcctgac
aaatcagagttgatgtcttcttgcagcacaagtagcaccagtgtgtttcagaactatgct
atggaggtactcatctcaagctgttcgcgatgtcgaacttgtgactgtctggttcatgat
gaagaaatcatggcaggatggactgcagatgattcaaatctcaataccacatgtcccttc
tgtggcaacctattcctgccctttttgaatattgaaatccgagatctgcggcgacctggg
cggtactttctgaagtccagtctatctacagagaatatgcagcttccctcacctttttca
aatcagacaggaaagtcctgtatctctactcccacatcatgtcttgctacatctgtaatg
cctgttcaagatgattttatttcaaaatgcaaatctaagcagcaggacaactcttgtgcc
agaagtatccaaatcccttcaggaagaagacaaaatgttgctgggtcagagtgtcccagt
cacgctgtagcaagaagtgtcagtacttacggaccactggaagaggatgagaagggaagc
cggaagctcagccatattgttcccactggcagcctgcccaccactttgcaaggaacaacg
gattctttgggactagaatggcgtttatgtagtcctgacccaatcactgtcccttaccta
agtcctctagtggtatggaaagagcttgaaagcttgcttgaaaatgaaggggatcgtgtg
ataacagtggcagattttgtagaccatcatcctatcgtgttttggaatttggtgtggtat
ttcaggcgtctggacttgcccagtaacttaccaggactaatactttcttctgagcactgt
aataaaaattcaaagattccacgaaactgtatgtcagaggacagtaaatatgttctcatt
cagatgctatgggacaacatgaagttgcatcaggatccaggacagcctctatatattctg
tggaatgcacagacccaaaagtatccagtggtccatttattgcaaaaagatgatgactcc
tttaaccaggagctcttgagaagcatggtgaaaagtattaagatgaatgatgtctatgga
ccaatgagtcaaatcttagagcgactgaacaaatggccacagattaaaagacagaggagc
ctctatagagaaatattatttctttcccttgttgctctagggagagagaacattgatata
gatgcttttgacagagagtacaaaatggcctatgatcgtctcacagctaatcaggtcaag
agtactcacaactgcgatagaccgccaagtactggagtgatggaatgccgaaagattttt
ggagaaccatatctttaa
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integrated database retrieval system
