Trachemys scripta elegans (red-eared slider): 117883968
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Entry
117883968 CDS
T07347
Symbol
AP5Z1
Name
(RefSeq) AP-5 complex subunit zeta-1 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
117883968 (AP5Z1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117883968 (AP5Z1)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
117883968 (AP5Z1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Neil1-DNA_bind
Motif
Other DBs
NCBI-GeneID:
117883968
NCBI-ProteinID:
XP_034639827
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All DBs
Position
10:complement(9516648..9534505)
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AA seq
811 aa
AA seq
DB search
MFTPGAENFLRQAREIQDEELRKFSSRITSLLQNHDLGNDTIDCLQRLFLIVSATKYGRK
LDGKFVELLQKVLCLPKCPEQIQALCAAILREMSPSNDLILSCDEIQDAKLLSLVSSILL
AQGNKKAEVLAVGQRVVKVLEGRLPEGHSSRHLLPLLSKIISLSPASLTEDQTNLVNKRM
VDWLRYASVQQGVAQPSGGFFSNPRARQPGPVTEVDGAVATDFFTVLSIGQYYTEDQWLN
MQAFSMLRKWLLCYGSEGANSPNSDDKSEVDGSIMSMVSATSTSSRLLPPKERLREKAFE
YCQRLIEQSNRRALKKPDGDLQKACLIEAVTIMDIICRQDSSYVYRTLSCLKILHGRISG
DLAYARALLPIAQFFLNHSETAAVDSEAVYKHLFTRIPAQLFHSPMLAFEFIQFCRDNVQ
FFTENLSIFRRSFPNLFKLLAWNSPALISEFMDLLPALLGADTAIEIFHLLLDLPCLVAA
LDIQLRAASAPISERATWDPAAKPASCLEAFRHPLYRSTFQYLLRIETAPRDSPERLAPL
RQLLGSMASCPRVVQCADTIPVLLQLYFGVVAEFADGPLINQLVLVLLERSEQLYKIPAF
KADVHRVLSSQLVLLCKLHPSLVVELSKELLEFSGTVSNIRNKEDIFTYVVWAIGEYMSV
SYDKRCTVEQINKFFEALEAMLFEITQLRPSASIPKYSPRVITVLMTTLTKLASRSQDLI
PRMSLFLSKMRAFVQSPAMASVYSEEDNEEILTRAAELMNLLKMPSVAQFVLTPSAEVAS
PRFHRDTNVSLPLAMKTASRLLERGTGFVPG
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgccgggggcggaaaacttcctgcggcaggccagggagatccaggatgaagaa
ctgagaaagtttagttcccgaatcacaagccttctccagaatcatgacctgggaaatgat
accattgactgtttgcagagacttttccttattgtttcagccacaaaatatggccggaag
ttggatggcaaatttgtagagctgttgcagaaagtactgtgtctgcccaagtgtcctgag
cagattcaggcgctgtgtgctgccatcttgagagagatgtcacccagcaatgatctgatc
ctatcctgcgatgaaatccaggatgcaaagctcttgagtctagtgtcctccatcctcttg
gctcagggaaataaaaaggctgaggtgttagcagtggggcagcgtgttgtaaaagtcctg
gaagggcgactgcctgagggtcacagttcacggcaccttcttcctctactctccaagatc
atcagtctatcgccagcaagcctaactgaagatcagaccaatctggtcaataaaaggatg
gtggactggctgagatacgcaagtgttcagcaaggagttgcacagccctctggaggcttc
ttctccaatcccagggcaaggcagcctggccctgtcacagaggtggatggtgcagttgcc
acagacttcttcacagtgctctcaattggtcaatattacacagaggaccagtggctcaac
atgcaggccttttccatgctgcgcaagtggctgctgtgctatgggagcgagggggcaaac
agccctaattcagatgacaaatcagaggtagatgggtctatcatgtccatggtctctgct
acctccacctccagtcgcctgcttcctccaaaggagcgtctaagagagaaggcttttgaa
tactgccagcggcttatcgagcaaagcaaccggcgggctctgaagaaaccagatggggac
ctgcaaaaagcttgtctcatcgaggctgtcactatcatggatattatctgcaggcaggac
tcctcctatgtataccggacgctctcctgcctgaagatcttgcatggcagaatcagtggg
gaccttgcttatgccagggcactgctgcccattgctcagttcttcctgaaccacagtgag
acagcagcggtggattcagaggcagtttacaagcacttgttcaccaggattcctgctcag
ctcttccacagcccaatgctggcctttgagtttatccagttctgcagggacaacgtccaa
ttcttcacagagaacctcagcatcttcagacggagcttcccaaacctcttcaagctccta
gcatggaatagcccagccttgatctctgagttcatggaccttctgccagctctgcttggt
gcagacacagccatcgagatctttcacttgctgcttgacctgccgtgtttggtggctgct
ctggacatccagctgagagctgcctctgctcccatctcggagagagccacctgggatcct
gctgccaagccagccagctgcctggaggccttccgccacccgctctacagaagcaccttt
cagtatctcctccggattgagactgcccccagagactcccctgagcggttggctcccctt
cgccagctgctggggtccatggccagctgtccccgggttgtgcagtgtgcagacaccatc
cctgtcttactgcagctctacttcggtgtggtggcagagtttgcagacgggcccctgata
aaccagctggtgttggtgctgctggagaggagtgagcagctctacaagatcccggcgttt
aaggccgatgtccatagggtgctgagctcccagctggtgcttctgtgtaagctgcacccc
tccctggtagtggaactgtccaaggagcttctggagttttcaggaactgtcagcaacatc
cggaacaaagaggatatcttcacctacgtggtctgggctattggagagtacatgtctgtc
tcatacgacaaaaggtgcaccgtggagcagatcaacaagttcttcgaagccctggaggcc
atgctgtttgaaatcacgcaactccggccctcggccagcatccccaagtattcgccacgt
gtcatcacggttctcatgacgacgctgaccaaactggcatcacgcagccaagatttgatc
cctaggatgtccctgttcctgtccaagatgagagcatttgttcagagcccggccatggcc
tcagtgtacagcgaggaagacaatgaggagatcctgacccgggccgctgagctgatgaac
ctgttgaaaatgcccagcgtggctcagtttgtgctgacgccatcagcggaggttgccagc
ccacggtttcaccgagacactaacgtgtccctgcctctcgccatgaagacggccagccgg
ctgttagaaagggggactggcttcgtgccagggtga
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