Trachemys scripta elegans (red-eared slider): 117883979
Help
Entry
117883979 CDS
T07347
Symbol
CCZ1
Name
(RefSeq) vacuolar fusion protein CCZ1 homolog
KO
K27045
vacuolar fusion protein CCZ1, animal type
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117883979 (CCZ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117883979 (CCZ1)
Membrane trafficking [BR:
tst04131
]
Endosome - Lysosome transport
Others
Others
117883979 (CCZ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Intu_longin_1
Intu_longin_3
Intu_longin_2
Methyltransf_20
YezG-like
Motif
Other DBs
NCBI-GeneID:
117883979
NCBI-ProteinID:
XP_034639849
LinkDB
All DBs
Position
10:15195358..15226192
Genome browser
AA seq
477 aa
AA seq
DB search
MAAAAAGGAGQEKQLAPALLSFFIYNPKLGPREGEEEKKILFYHPNEVEKNEKIRNVGLC
EAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWMVMVVRNPVIEKYHKDGKPVIEYQ
EEELLDKVYSSVLQQCYSMYKLFNGTFLKAIEDGGVRVLKERLEKFFHRYLQTLHLQSCD
LLDVFCGISFFPLDKMTYLKIQSFINRMEESLNIVKYTAFLYNDQLIWSGLEQDDMRILY
KYLTTSLFPRHIEPELAGRDSPIRAEMPGNLQHYGRFLTGPLNLNDPEVKCRFPKIFVNT
DGTYEELHLIVYKAMSAAVCFMIDASMQPTLDFCRKLDSIVGPQLTVLASDICEQYNINK
RISGSEKEPQFKFIYFNHMNLAEKSTIHMRKTPSVSLTSVHPDLMKILGDINSDFTRVDE
DEEIIVKAMSDYWVVGKKSDQRELYVILNQKNANLIEVNEEVKKLCATQFNNIFFLD
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgcggcggggggagccgggcaggagaagcagctcgctccagccctgctt
agcttcttcatctacaaccccaagctggggcccagagagggagaggaggaaaaaaagatt
ctcttttatcacccaaatgaagtagaaaagaatgaaaaaattagaaatgttggattatgt
gaagctatagtacagttcacaaggacctttagtccatcaaaacccgcaaaatctttgcat
actcagaagaatagacagttcttcaatgaacctgaagaaaatttctggatggtcatggta
gtacggaatcccgtaatagaaaaataccacaaagatggaaaaccagtcattgagtatcaa
gaagaagagttactggacaaggtttacagttcagtcctacagcagtgctatagcatgtac
aagctttttaatggtacattccttaaagccatagaagatggaggtgtaagggttctaaaa
gagagattagagaaattcttccatcggtacttgcaaacactgcatttacagtcatgtgac
ctgctggatgttttttgtggaatcagcttctttccattggataaaatgacttatttgaaa
atccaatcatttattaataggatggaggaaagcctgaacatagtcaaatacactgccttt
ctctacaatgatcagctcatctggagtggtttagaacaagatgatatgagaattttatac
aaatatctcacaacatccctctttccaaggcacatagagccagagttagcaggaagagat
tccccaatacgtgcagaaatgccaggaaatctacaacactacggaaggtttcttactgga
cctttaaatcttaatgatccagaagtaaaatgcagattccccaaaatatttgtaaacaca
gatggcacttatgaagaacttcatttaattgtttataaggccatgagtgcagctgtctgt
tttatgattgatgcctcaatgcaacctacactggatttttgccgtaaactggacagcatt
gttgggcctcaactcacagtattagcatcagacatatgtgaacaatacaacatcaacaaa
aggatatcagggtctgagaaggaacctcagtttaagtttatctatttcaatcatatgaac
ttggcagagaaaagtacaattcacatgaggaaaacacccagtgtatcactcacgtccgtt
caccctgacctcatgaagattctaggtgatatcaacagtgattttactagagttgatgag
gatgaagaaatcattgtgaaggcaatgagtgactactgggtggttgggaaaaagtctgat
caacgggaactgtatgttattttgaatcaaaaaaatgcaaaccttattgaagttaatgaa
gaagtaaagaaactttgtgcaacacagttcaataatattttcttcctggattga
DBGET
integrated database retrieval system
