Trachemys scripta elegans (red-eared slider): 117883987
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Entry
117883987 CDS
T07347
Symbol
SREBF1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117883987 (SREBF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117883987 (SREBF1)
04131 Membrane trafficking [BR:
tst04131
]
117883987 (SREBF1)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
117883987 (SREBF1)
Membrane trafficking [BR:
tst04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117883987 (SREBF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
117883987 (SREBF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
ZapB
Motif
Other DBs
NCBI-GeneID:
117883987
NCBI-ProteinID:
XP_034639869
LinkDB
All DBs
Position
10:7188507..7213702
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AA seq
1128 aa
AA seq
DB search
MTSLCFDDTSLDNLDPSLTLQESSEITTALLSDIDDMLQLINTQDNEFPGLFDTPFGAPA
TPMPEASTPVGLPSTPSSLDGYLGPSQAPPSAPVSMYQVPPPLQSFSPQPQLRAGPGLTA
SPPASDIKEEPMALSASQPRPLPQPQQGLTTAQSFVPASQGQFTPQHLLGYQSQHGFTAL
HPAGAAQSPASLPQSSPQIQPVTIQAHVQNISPQQLLAAASTGTSQAVSSQIQQVPVLLQ
PHFIKAESLFLTAVKTDVSGAKTSSHTTLATTAAIQSAPLQVPTLVSGGTILATVPLMMD
ADKLPINRLAASGKSALVQNKGEKRTAHNAIEKRYRSSINDRIMELKDLVVGSEAKMNKS
AILRKAIDYIRFLRQSNQKLKQENVALKMAAQKNKSLKDLVATCGGKTDVPMEEIKPEMM
DMLTPPPSDVGSPSHSSPLSLSGGSSSDSEPDSPLFEETKGKKEQQLSTGSLCMLDRSRM
ALCAFVFLCLSFNPLASLLRGTSPEGAPESGASPGPGRSIMGQPDSIDEASGWPTLIFWL
LNVLVVLGAFVRLFIYGEPVTRPHSEPSVLFWRHRKQADLDLARGDFAQASQHLWTALKA
LGRPLPTSNFDLTCSLMWNLIRHLLQRLWVGRWLAGRAGGFRRDSELKADVRKSARDAAL
VYHKLHQLHMTGKHVGGHLSGINMALSAVNLAECAGDTISVAMLAEIYVAAALRVKTSLH
RRVHFLARPFLCSARQVSLSHSGTVPPAMQWLCHPVGHRFFVDGDWSLKGTPRDSIYSST
SNPVDPLAQVTQLFREHLLEKALCCVAMPEPSPPAAHGEGEFSDALEYLQLLNGCSDTAG
TPSCTLSISSGMVAGTGSDPVAKWWASIVAVAIHWLQGDNEAAERLYPLVETMPRALQVS
EKPLPRAALHSFKAVRALLGKQDGSQASLGQCEKASGYLRDSLGLSLPATGTLDKAVQLL
LCDLLLVTRTNLWQQQMHVSQQLSCVYQASALELRGFQQDLSSLRRLAQTFRPAMRRVFL
HEATARLMARASPTRTHQLLDRSLRRRGAQSSKEASEPESHPTPREHAEALLLACCYLPP
SFLSAPGQRVGMLAEAARTLEKLGDKRMLHDCQQMIIKLGSGTTVTTG
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcctctgttttgatgacacttccctggacaacctggacccttccttgactctc
caggaatccagcgagatcaccactgccctgctgagcgacatcgacgacatgctccaactg
atcaacacccaggacaatgagttcccgggcttgtttgacactccgttcggcgcacctgcc
accccgatgccagaggccagcacgcctgtggggctgccgtccacacccagctctctcgac
ggctacctggggcccagccaggcgcccccttcggctcccgtcagcatgtaccaggtgcct
ccaccgctgcagagcttctcaccgcagccccagctgagggccgggccaggcctgacggcg
tctccgccggcgtcggatatcaaggaggagcccatggcactgtctgccagccagccccgg
cctctgccccagccacagcaggggttgacgacagcccagagcttcgtcccggcttcccaa
ggccagttcaccccacagcacttgctgggctaccagagtcagcacggcttcaccgcattg
catcccgcaggggctgcccagtccccggccagcctccctcagtcctctccgcagatccag
cccgtcaccattcaggctcatgtccagaacatctcgccccagcagctgctggccgcagcc
agcaccggcacctcccaagctgtctcctcccagatccagcaagtcccggtcctgctgcag
ccccacttcatcaaggccgagtccctgttcctgacagctgtgaagacggatgtctctggg
gcaaagacctccagccacacgacgctggccaccacggcggccatccagtctgcgccgctg
caggtcccgaccctggtgagcggaggcaccatcctggccacggtgccgctgatgatggat
gccgacaagctgcccattaaccggctggcggccagcgggaagtcggccttggtgcagaac
aaaggcgagaagcgcacagcacacaacgccatcgagaagcgctaccgctcctccatcaac
gacaggatcatggagctgaaggacctggtggtgggctcggaggccaagatgaacaagtcg
gccattctgaggaaggcgatcgactacatccgcttcctgcgtcagagcaaccagaagctg
aagcaggagaacgtggccctcaagatggccgcccagaagaacaagtccctgaaggacctg
gtggccacgtgcggcgggaagacggacgtgcccatggaggagatcaagccagagatgatg
gacatgctgacgcccccgccctcggatgtgggctccccctcccacagcagccccctctcg
ctgagcggcggcagcagcagcgactcggagcccgacagcccgctgttcgaggagaccaag
gggaaaaaggagcagcagctgtccaccggcagcctgtgtatgctggatcgctcgcgcatg
gctctctgcgccttcgtcttcctctgcctctccttcaaccccctggcctccctgctgcgg
ggcaccagccccgagggcgccccagagagcggggcctcccctggccctggcaggagcata
atgggccagccggattccatagacgaggcctcaggctggcccaccttgatcttctggctg
ctcaacgtgctggtcgtgctaggagcctttgtccggctcttcatctacggtgagcctgtc
acccgcccccactcggagccgtccgtcctcttctggaggcaccgcaagcaggcggacctg
gacctggcccggggggactttgctcaggcctcccagcacctgtggacggccctgaaggcc
ctgggccgcccgctacccacctccaacttcgacctgacttgcagcctcatgtggaacctc
atccgccacctgctgcagcgcctctgggtggggcgctggctggccgggcgggcgggcggc
ttccggcgagacagcgagctgaaggctgacgtgcgcaagagcgcccgcgatgccgccctg
gtctaccacaagttgcaccagctgcacatgacagggaagcacgtcgggggccatctctcc
ggcatcaacatggcgctgagtgccgtcaacctggccgagtgcgccggcgacaccatctcc
gtggcgatgcttgccgaaatctatgtggccgcagcgcttcgtgtgaagaccagccttcac
cggcgcgtccacttcctggcgcgccccttcctgtgcagtgcccggcaggtgtccctgtcg
cacagcggcaccgtgcccccggccatgcagtggctctgccaccctgtgggccaccgcttc
ttcgtcgatggagactggtctctgaagggcaccccgagggacagtatctacagctccacc
agcaacccagtggaccccctggctcaggtgacccagctgttccgtgagcacctgctggag
aaggccctgtgctgtgtagccatgccggagcccagcccgccagcggcccatggagaaggg
gagttctccgatgccctggagtacttacagctgctcaacggctgctcggacaccgctggc
acccccagctgcaccctctccatcagctccggcatggtggctggcacaggcagcgacccc
gttgccaagtggtgggcgtccatcgtcgccgtggcgattcactggctgcagggggacaat
gaggcagctgaacggctatacccactggtggagaccatgccgagggccctgcaggtgtcg
gagaagcccctgcccagggccgcgctgcactccttcaaggccgtgcgggccctgctgggg
aagcaggacggcagccaggccagcctgggccagtgcgagaaagccagcggctacctgcgg
gacagcctgggtctcagcttgcccgccactggcacccttgacaaggcagttcagctcctc
ctgtgcgatctgctcctcgtgacccgcaccaacctgtggcagcagcagatgcatgtcagc
cagcagctgagctgcgtctaccaggcctcggccctggagctgcggggcttccagcaggac
ctgagcagcctgcggcgcctggcccagaccttccggccagccatgcgccgggtgttcttg
cacgaagccactgccaggttgatggccagagccagccccaccaggacccaccagctgctg
gaccgcagcctgcgcaggagaggggctcagagcagcaaagaagccagcgagcccgagagc
caccccacgccgcgggagcacgccgaggccctgctgctggcttgctgctacctcccaccc
agcttcctctccgctccaggccagcgcgtgggcatgctggccgaggccgcccgcaccctg
gagaagctgggtgacaaacggatgctccatgactgccagcagatgatcatcaaactgggc
agcggcaccacggtcaccaccggatag
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integrated database retrieval system
