Trachemys scripta elegans (red-eared slider): 117883989
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Entry
117883989 CDS
T07347
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117883989 (RAI1)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117883989 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
117883989
NCBI-ProteinID:
XP_034639871
LinkDB
All DBs
Position
10:complement(7222319..7353075)
Genome browser
AA seq
1919 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQQTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYPG
YENSAVEKYHRGNKQLPGQQLQGRPAFSNYAVQENSPYPARYSGEESLQTWGAQQQSLAG
GVAKYEENLMKKSPAPAGSRQYHEQTAQLPFRTHSLHLQQQPPPPQPPALTYPKLQRQKI
QNDVSSPMSFSQTGHFTQHSQSQFPASSTYSSVPGGSQAAHSYKSCTAPSSQQHERPLGG
AANLASGQRVQNLHGYQANRISYDQQQQPQQQQQQQPLQGRHHAQETLHYQNLAKYQHYN
QPGQTYCQTDAPVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFQYSQQ
SLSTGSFPAGITDHSHFMPLLNPSPTDGTSPDAQSGNCKNLQKEKIPENLLSDLSLQSLT
ALTSQVENISNTVQQLLLSKSAVPQKKGIKNPPRTPEQLKGQHCSPESSTYSAEQVGTPL
SDPLSTPQSVHAEAQDADYLSGSEDQLERNFLYCSQSRSPARVNSNSKAKPESVSTCSVT
SPDDMSTKSDDSFQSIHANLPLETFTKYMTNERECPRLLLSALSQEELASEIIVLQDAIN
EKADKAWANSPALNKDPAKSPFHIENHRTCLDSMVKSTWSNQGDSGTHTEPLKLDKASGG
NNSKDFSEEVYENAQVEFTTTETKNALKVTSSMAYNSKPNIPAATSSSGAASYSCYSNTT
ANSVGSDNAMEHFDWPDESISESCLRWKELGPCLQSSDLSKDLFHSKLAGSCKEKKNACC
MDICDGEQPAKNEQAEDFSQQQMGEEEEDTLTYDEATKADSERWLEDTRHCCSGGDFSEI
PMISSPDLKESDLEPEEYSSLCELASSEQKSVIYDTSPPKPPENAAVLSSKDVPVSAEET
VSAVEKENSAPSSRLSGQSVILLGPAVGTETKVKSWFESSLPHIKPEEDTMVGESVLQEK
TETETTLLVKVKKQMLPENLLVKSESISRGKTLRSKRVHSRLSEGEESSKPVPGLFKDIQ
AAGMVANPCVGPDGEMETTSKNTHGQTPRFPAEGLPARMCTRSFTALSEPRTPAPLEGLN
VLAHQEKLGKKSVCGMKQRVAFKARKRTGRPTPKVVQNPSDPTSLLVPNLVQNEDFIGQK
AKGLEPQDAEVKDQRSMILRSRTKTQEVYTKRRREKRTAEVRLKNCKTPKKLLSNNHLPP
TFKITPPGGPHKEGKVGKRMKLPKSGPGMGSKMSERPLHSLKRKSTFVSPIPTKKRNLVL
RSSSTKEEKPEASPNLFKRMPSTKKARAKLPTKSSCEAALTPPPAKEPPNVCIKITSRAA
FQGAMKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKTAAATATAHSNPLSPAGAEKER
ALKNASVTPAVGEAGPLNQGMAQKAPAASVAEQLCRNSNNRSLKGKLMNSKKLSSDCFKG
EAYSSPETVQYNSSSMAAKSVSLLPKKRNRKGKAAAFSVAKNPLDRRAHLAPALLLTARE
RAGAGDALGNGEDGQRDGKKPKTEDKDFAKNEPPEGRSSQTQTRAQKQRANHSNYNGYSK
RQRKRHTRSKAKNVASRCKSRAKRRRQQQAPLLNPTEPEIRLKYISCKRLRTDSRAPPFS
PYVRVEKHNEFTTTCTVINSAGEEARLHKEQQPSSSAQALLPGGASLQPKAALPLSSTMH
LGPVVSKALNAACLVCCLCRNPANYKDLGDLCGPYYPEHCLPKKKSRLKEKIKVEGPSEE
APVPSPAERTLKTTDNNCTTSTISGKPPRLDSAADSAKQSALRSSSRGMFRKLQSCYCCD
ERTEGEEAAEKPRRHECNKAESPSQESVGDTQEHWVHEACAIWTAGVYLVAGKLYGLQEA
IKVAAEVRCSSCQQAGATVGCCHKGCVQTYHYACAIDTGCLLTEENFSLKCPKHKRQPL
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagaactaccagcagact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcgtcagaggctggtggcgaaagaatactacagtcagcagcagctgccttacccaggg
tacgagaacagcgccgtggagaaatatcacaggggaaataagcaattgcccggccagcag
ctgcaaggccggccggccttttcgaattatgcagtccaagagaacagcccatacccggcc
cgctattctggggaggagagcctgcagacctggggagctcagcagcaatccttagccgga
ggagtggcaaaatatgaggaaaacttgatgaaaaagagcccggctcccgccggcagcagg
cagtaccacgagcaaacggctcagcttccattccgaacgcattccttgcacctgcagcag
cagccgccgccgccgcagccacctgccttgacgtatcccaagctgcaaaggcagaaaatc
caaaatgacgtctcctcacccatgtccttttcccagaccggccactttacccagcactcc
cagtcccagttcccagcatcttcgacgtactcctccgtcccaggagggagccaggcagct
cactcctataaaagctgcaccgcgccctccagccaacagcacgagcggcctcttggaggt
gctgctaacctagcgtctgggcagcgagtacagaacctgcatggctatcaggcaaaccga
attagctacgaccaacagcagcaaccgcaacagcaacagcagcagcagcccttgcaagga
cggcatcatgcccaggaaacgcttcactatcaaaacctagcaaagtaccaacattataac
cagccaggccagacctattgccagactgatgctccagtgaggaccccagagcaatattac
cagacatttagtcctagctcaagtcattctccagctcgttctgttggtagatctccatcc
tatagctccactccatctcctctgatgccaaacctggagaatttccaatacagccagcaa
tctctcagcacagggtctttccctgccggcatcactgaccacagccatttcatgccttta
ttgaatccttctccaacagatgggacgagtccagatgctcagtctgggaactgcaaaaac
ttgcagaaggagaagatccctgaaaatcttctgtccgatctcagtttgcaaagtctaact
gcgctcacctcacaagtcgagaatatttccaacactgtccagcagcttctcctttcaaaa
tcagctgtgccccagaaaaaaggcatcaaaaaccctcctaggacaccagaacagctaaaa
ggccaacactgcagtccagagagtagcacatactctgccgagcaggtagggacccccctt
tcggaccctcttagcacccctcagtcagtacatgctgaagctcaggatgccgattatctg
agcgggtctgaagatcaactagagagaaatttcctttattgcagtcaaagccgcagtcca
gcgagggtcaacagcaactccaaggccaagcccgagtcggtctctacctgctcggtgact
tctccagacgacatgtccacaaagtccgatgattctttccagagtattcatgcgaacctg
cccttggaaacattcaccaagtacatgaccaatgaaagggagtgcccgaggctgctcctg
agtgcgctatctcaggaggaactggcttccgaaatcattgtgctacaggatgctatcaac
gagaaggcagacaaagcctgggccaactcccccgctttaaacaaagaccccgcgaaatcc
cctttccatatagaaaatcacagaacgtgtctggactcaatggttaagagcacctggtcc
aaccaaggcgactcgggtacccacaccgaacccctgaaattagacaaagcctctggggga
aacaacagtaaggatttcagcgaagaggtttatgagaatgcccaggtggagtttacaaca
actgaaacaaagaatgctcttaaagtcaccagttccatggcatataattccaaacccaat
atcccagctgctacttcgagttctggggccgccagttacagctgctattcaaacaccacg
gccaactcagtgggttccgacaatgccatggagcattttgactggccagatgaaagcatc
agtgaatcatgcctgaggtggaaggagcttgggccatgcctacaatcgtcagatctttcc
aaggatttgttccacagcaaattggccgggtcttgcaaagagaaaaaaaatgcctgctgc
atggatatatgtgacggcgaacagccagccaagaatgaacaagctgaggacttcagccag
cagcagatgggggaggaagaggaagacactttgacgtatgatgaggccaccaaagcagat
agtgagaggtggctggaggataccaggcactgctgttcaggtggggacttcagtgaaatc
ccgatgatatcatctccagatctgaaggagtctgatttggaaccagaagaatattcatct
ctgtgtgagctggctagttcagagcagaaatctgtgatctacgatacatccccacctaaa
cctcctgagaatgctgcagtgctctcctccaaggatgtgccggtatcagcagaagaaact
gtaagcgcagtggagaaagaaaattcagctccctcctctcgtttgtctggacagtctgtt
atcctcttaggtccggcagtcggcactgaaaccaaggtgaaaagttggtttgaatcttcc
ctgcctcacataaaacctgaggaggacacaatggtaggtgaaagtgtcctccaggagaag
acagagaccgaaacgaccttgttggtcaaggtaaagaagcaaatgctaccggaaaatttg
ctggtaaaatcagaatcaatctcaaggggcaagactcttcgcagcaagagagtccattcc
aggttgtcagaaggagaggaatccagcaaaccagtaccaggcctgttcaaagacatccag
gcagctggcatggtggccaatccatgtgtagggccagatggtgagatggaaacaacaagc
aaaaatacccatggccagactcctaggtttccagctgaaggcttgccagctcggatgtgt
acccgctctttcactgccttgagtgaacccaggacgccagccccactggaaggactgaat
gtgttggcccatcaagaaaagttagggaagaaatcagtttgtggcatgaagcagagagtt
gctttcaaagccaggaaacgcaccggaagaccgaccccaaaagttgtccaaaatcccagc
gatcccacttctctcctggtcccaaacttggtgcagaacgaggactttattggccagaag
gctaaaggcctagagccccaagatgcagaggtgaaggaccagagatccatgatcctgcga
tctaggaccaagacacaggaggtctatacgaaaaggagaagggagaagaggacggcagag
gtcaggctcaaaaactgtaaaacacccaagaagctcctttcaaacaaccatctacccccc
accttcaagatcacacccccaggggggccacacaaagaagggaaggtgggcaaaagaatg
aaactccccaaatccgggcccggaatgggcagcaaaatgtctgagcggccgctgcattcg
ctgaagagaaaatccaccttcgtgtcccctatccctaccaaaaagagaaatttagtttta
cggagcagcagcacaaaagaggagaagcccgaagcctcccccaatctctttaaaaggatg
ccgtcaaccaaaaaggcgagagctaaactgcccacaaagagctcctgcgaagcggccttg
acgccccctccagctaaagaaccccccaacgtctgtattaaaatcacctctcgggcagca
tttcagggggccatgaagacaaaagtgctgcccccgaggaaaggcaggggcctcaagctg
gaggccattgtgcagaagatcacctcgccgaatttaaagaagtttgcatgcaaaacggcc
gctgccaccgctactgcacacagtaatcctctgagccctgccggcgcggagaaggagcgg
gccttaaagaatgcaagtgtaaccccagcggtgggagaagcggggccattaaaccagggc
atggcacaaaaggctcctgccgcttcagtagcagagcaattatgcagaaattcgaacaac
agatccttaaaaggaaaactaatgaacagtaagaaactgtcctctgactgtttcaagggt
gaggcctattcatctcccgagacagtgcagtacaacagcagcagcatggctgcaaagagc
gtcagcctgctgcccaagaagaggaaccgaaaagggaaagcagcagccttcagcgtggcc
aaaaacccattggacaggcgggcgcatctcgcccctgctctgctcctgacggccagagag
cgggcaggcgcgggggacgcgctggggaacggggaagacggacaaagggacgggaagaag
ccaaagaccgaggacaaagactttgccaagaacgaaccccccgaggggagaagctcccag
acccaaacccgggcgcagaagcagcgagcgaaccactccaactacaacggctactccaag
agacaaaggaaacggcacacccgtagcaaggccaagaacgtggcctccaggtgtaaaagc
agggcgaagcggcggcggcagcagcaggcccctctgcttaaccccacggagcccgaaatc
aggctcaagtacatctcgtgcaagcggctgcggacggacagccgagcgccgcccttctcc
ccctacgtgcgggtggaaaagcacaacgagttcaccaccacctgcaccgtcatcaactca
gccggggaggaggccaggctccacaaggagcagcagccttcgtcctcggcccaggccctg
cttcccggcggggcctccctgcagcccaaagcggcgctgcctttatcttccacaatgcac
ctgggcccagtggtgtccaaggccctcaacgcagcctgtctggtctgctgcctctgccgg
aacccagccaattacaaagaccttggggacctctgtgggccgtattacccggagcactgc
ctgccgaaaaagaaatcgaggctgaaagaaaagattaaagtggaggggccaagcgaagag
gctcccgtgccttcgccggcagagagaacgctcaaaacgacagataataattgtacaacg
agtacaatcagtggaaagccgccaaggctggacagtgccgctgactcagcgaaacagagc
gcgctccggtcgagttccaggggaatgtttaggaaactacaaagctgttactgctgtgat
gagaggacagagggagaggaggcggcagagaagcccagacggcacgagtgcaacaaagcc
gagtccccgtctcaggagtcggtgggagacacgcaggagcactgggttcatgaagcctgt
gctatatggaccgctggggtttacctggttgcagggaagctgtatgggctacaggaggcg
ataaaggtggctgctgaagtgagatgctccagttgccaacaagcaggagcaaccgttggg
tgctgccacaagggatgtgtccaaacctatcattacgcatgtgccattgacacaggttgc
ttattaactgaagagaacttctctctgaaatgtcccaaacataagaggcagccgttataa
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integrated database retrieval system
