Trachemys scripta elegans (red-eared slider): 117884064
Help
Entry
117884064 CDS
T07347
Symbol
FAN1
Name
(RefSeq) fanconi-associated nuclease 1 isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117884064 (FAN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117884064 (FAN1)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
117884064 (FAN1)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
117884064 (FAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
Fan1_SAP
VRR_NUC
FAN1_HTH
zf-WRNIP1_ubi
PRP21_like_P
Motif
Other DBs
NCBI-GeneID:
117884064
NCBI-ProteinID:
XP_034640040
LinkDB
All DBs
Position
10:complement(55551809..55596454)
Genome browser
AA seq
1119 aa
AA seq
DB search
MGRSLYERRVIFAAVSPALPLLGAGARVAPTAPGDRPTARIRKYQSNEAAHAVDVLFNPI
MSEATSPENKRPRRSLSLSKNKEKNENKKKNEAEVKGAPSTPSASSSILSFFNNTPPAKV
TCPMCGQMVPRYGINKHIDEICQKNHGDGAMILVDSGLDCFMNAGPSGIDLNTSSSPYFA
KEASTPEKNMSIFESNLLKMRADAGQQTSPYFKNNNAPMCNVQNGPRVQMVKSISLGNLS
SKLSRRHRIQNRQLIEENKRNSSSQAVHSVCDNAAEWGDGETCAGDGFQKENHFVLAGFQ
KQHVPKDSLTKELESQGETRECDKETLVGSAHGLVSSVCIVARELVSAAGNTEKHSYSEG
MVPNLGKHKTHPASYNKVERSDGSEAKTQFSVKDIPSSRTQVMYESHTENCLVTDNTGTL
PMEVHENLRNEMIYHTFSEPTQEVDFQSPASDILDKISGAFGSASDSFGHPYYLQNFLMV
LQVVLENHDDLRLFDEQDTSTITKFYQLSAGGQKLYVRLFQRKLNWIKINKIEYAEISAD
LLPVIGELVEAGFLQTESELQNLSEGLDLLSAPELKTLAKTFHLKNPNGQKQQLVEDFLR
LSKQRSIFSRDQAGIGAVILKRAKDLSGKSVRVCKGPRAVFSRVLLLFSLTDSVEDEEAA
SGGQGQLSTLLMVNMGRTVFPSYTVNRKTAIFQDREDLIRYATAAHLSNDVATAMANGNW
TEAKYLYMCAKETWHELKNHPSLRCHRDLPEYLRHFTVGWMYTRILSRGVEILQRLHMYE
EAVEELQYLLSQEVYCTDSRGRWWDRLALNLHQHLKRNEQAIECIRKGLSDPLVRTGHRL
SLYQRALRLKDSPSCKKFRSLFQELPVITVEDVTHVTIKGKMCPQTGVGKSVFLMEDVDD
QEEGEDFTLSTIMCSVEELALTHYRQNGFDQGIHGEGSTFSTLYSLLMWDIIFMDGIPDV
FRNSYQAFPLDLYTDSFYENRKDAIESRLQLLHAASSETLQEMIANVWNAQEGKAAALVS
WDRFTSLQQAQSLVACFGGPFLSGVCRRLSKDLRHCRGGLPDLVVWSTQEHRFKLVEVKG
PNDRLSHKQMIWLDELKKLGAAVEVCHVAAVGAKSKRLS
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcagcctgtacgaacggagggtcattttcgctgccgtttccccggccctgccg
ctcctcggggctggggctcgggtggcgcctacagccccgggggacaggcccacggccaga
ataagaaaatatcagtcaaatgaagcagcccatgcagtggatgtgctttttaatcccata
atgtcggaagccacatctccagaaaataaaagaccccggagaagcttgtccctcagtaaa
aacaaggaaaagaatgaaaataagaaaaagaatgaagcagaagttaaaggagcaccatcc
acaccttcagcttcttcctctatcctttctttttttaacaacactccccctgccaaagtc
acctgccctatgtgcgggcaaatggtgccaaggtatgggatcaacaagcacatagatgaa
atttgtcagaagaaccatggggatggtgcaatgattctagttgattcaggacttgactgt
tttatgaatgcgggcccatcaggtatagatctgaacactagttccagcccatactttgca
aaggaagcttcaactccagagaaaaatatgagcatctttgaaagcaacttgttgaaaatg
agagcagatgcaggacagcagactagtccttactttaagaataataatgctccaatgtgc
aatgttcagaatgggccaagggtgcaaatggttaaaagtatctctttgggcaacttgtca
tctaaactgtccagaaggcaccgtatccagaatagacaactgatagaagaaaacaagagg
aattcttcatctcaagctgttcacagtgtgtgtgacaatgctgcagaatggggtgatgga
gagacttgtgctggggatggctttcagaaagagaatcactttgttctggcaggattccaa
aagcagcatgtcccaaaagacagtttaacaaaagaacttgaaagtcagggagaaacacga
gaatgtgataaagagactcttgtgggttctgctcatggattagtatcttcagtttgcatt
gtggccagggagctagtgtctgctgcagggaacactgagaaacacagttattctgaaggc
atggtgcctaatcttggcaaacataaaacacatccagcaagttataataaagtagagaga
tctgatggttcagaagccaaaactcagttctctgttaaggatattccttcttcaaggaca
caagtgatgtatgagagccatacagaaaactgcctagtgacagataatacaggaacactt
cctatggaagttcatgaaaacttaaggaatgagatgatttatcatactttctcagaacct
acgcaagaggtggattttcagagtcctgccagtgacattttagacaaaataagtggtgca
tttggttctgcgtctgactcttttggtcacccatattatctccagaatttcctgatggtc
ctgcaagtggtcttggagaatcatgatgatctgagactctttgatgagcaagataccagc
actatcacaaagttctaccaattgtcagctggtggacagaagttatatgtaagacttttt
caacgcaagctgaattggataaaaattaacaaaatagaatatgcagagatcagtgcagat
ttgttgccagtaattggagaattggttgaagcaggctttctgcaaacagaatctgaatta
caaaacctttctgaggggctggacttgctttctgctcctgagctaaaaacattagcaaaa
acctttcacctgaaaaacccaaatggtcagaaacagcagctggtggaggactttctcaga
ctgtcaaaacaacgttcgatcttcagcagggatcaggctggtattggggcagtgattttg
aaaagggctaaggacctttctgggaagtctgtcagggtctgtaaaggcccccgagcagta
ttttctcgagttttactgctgttctcactcaccgattcagtggaggatgaggaagcagct
agtggtggccaaggccagctttccaccttgcttatggtaaacatgggtcgtacggtgttt
cccagttacacagtaaataggaaaacagcaatcttccaggacagagaagatctcatcaga
tatgcaacagctgctcatttgtcaaatgatgtagccactgcaatggctaatgggaactgg
acagaagctaaatatctctatatgtgtgcaaaagaaacctggcatgaactgaaaaatcat
ccttctttgagatgccatagagacttacctgagtatctgcgacattttacggttgggtgg
atgtatacaagaatcctctctcgaggggttgaaatactgcagagacttcatatgtatgag
gaggctgtggaagaactgcagtatcttttgtctcaggaagtgtattgtacagacagcaga
ggacgatggtgggatcgactggctctgaatttacaccagcacttgaaacgcaatgagcag
gctattgagtgcattagaaaagggctgtcagatccattagtgcgcacaggccatcgactc
tctctctaccagcgtgcactgcgattgaaagactcaccaagctgcaagaagttcaggagc
ctctttcaggagctgcctgtcataactgtggaagatgttacacatgttacaatcaaagga
aagatgtgtccccaaacaggggtgggaaaatctgtgtttctaatggaggacgttgatgat
caagaggaaggagaagacttcactctgtccacaatcatgtgttcagttgaggagctggcg
ttaacacattacagacagaatggctttgatcaggggattcatggagaagggtccacgttt
agtacactctatagccttttaatgtgggacattattttcatggatggcataccagatgtt
ttcagaaattcttatcaggcattccccctggatttgtatactgacagcttctatgagaac
aggaaggacgccattgaatctagactccagctactgcacgcagcttcctcagagaccctg
caagagatgattgccaatgtctggaatgctcaagagggaaaagcagcagcactggttagc
tgggaccggtttacttctctccagcaggctcagagtctagtggcttgctttgggggacct
tttctaagtggtgtatgtaggaggctctccaaagatctgcgccattgcagagggggtctt
cctgatctagtcgtgtggagtacgcaagagcaccgcttcaagctggtggaagttaagggt
cccaatgatcgcctctcccataaacagatgatttggctggatgaactgaagaagctggga
gctgctgtagaagtttgtcatgtggctgcagttggagctaaaagtaaacgcctaagttga
DBGET
integrated database retrieval system
