Trachemys scripta elegans (red-eared slider): 117884091
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Entry
117884091 CDS
T07347
Symbol
SPATA5L1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117884091 (SPATA5L1)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
117884091 (SPATA5L1)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
117884091 (SPATA5L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_lid_PRS2_C
AAA_22
AAA_14
TIP49
AAA_2
RNA_helicase
Rad17
AAA_33
AAA_7
bpMoxR
Vps4_C
AAA_3
NTPase_1
DUF815
AAA_28
TsaE
NPHP3_N
ABC_tran
nSTAND3
AAA_19
AAA_18
Mg_chelatase
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
117884091
NCBI-ProteinID:
XP_034640088
LinkDB
All DBs
Position
10:66487967..66507352
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AA seq
757 aa
AA seq
DB search
MAAALLKLLPLDPGDEGTQRCRMGPATLSTLGARLGSPLRITVPGGCCLCTAWPRNDLAD
GYLQLDLKCKTSGLAASKLKGLVLSVSHLKLLACHRLRKVTVKVVLKNLALKKSTPEATL
QEIVKELLRNVYVSLHHVVTAAPIPGNPVVCVEILAVDASTEQAGLIAPKTNINIKEVVT
LEWYRHLSKDTAKISAAGMDDLGSSLKEMIVLPFHFPKTFKKLGLSVPRGVLLMGPPGVG
KTLLIKAVAREVGAYLLCISGPAIYGSRPGESEENLRRVFEQGRELSSEGPTILFIDEID
SLCPKRGSSNSIPENRIVAQLLTLMDGIGSENEMVVMAATNRPDALDPALRRHGRFDREV
IIGTPTLKQRRSILQLITSNMPISTDVDLINLAEMTTGYVGADLTALCREAAMQAVLHSC
LDSVRTLINMADFHEAFKKIQPSSFRSSVGLTDFKPVTWEQIGGLEDVKLKLKQSIEWPM
KFPQAFVRMGLSQPKGILLYGPPGCAKTTLVKAVATSCHCSFLSVSGADLFSPYVGDSEK
ILSQVFRQARAHTPAIIFLDEIDSILGSRSACKTGHGAPEKVLSVLLNELDGVGIKVTER
RGNKLQLEGDCQEQNEKERQIAFQEVLNKDVMIVAATNRPDKLDDALLRPGRLDKIIYIP
PPDQKGRLSILKICTEKIPIDSDVSLEHLAVQTKLFSGADIENLCKEAALQALQENGLEA
TSVKHEHFVKSLKTVKPSLTLTDLDFYEKLFNKEVSS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctctcctaaagctgctccctctagacccaggggatgaaggcacgcaaaga
tgcaggatgggacctgccacgttatccactctgggagccaggctcggatccccccttagg
atcacggttcctggtggctgctgtttgtgcaccgcctggcccagaaatgatttggctgat
ggttacctgcagcttgatctgaaatgtaaaacttcaggtttagctgcaagcaagttgaaa
ggtctcgtgctgagtgtcagtcacttgaagcttttggcctgtcaccggttgagaaaagta
acagtgaaagtggtccttaagaaccttgccctgaaaaaatccaccccagaagcaacacta
caggagatagtcaaagagctgctgagaaatgtgtatgtttctcttcaccatgttgttact
gctgccccaattcctggaaatccagtagtgtgtgttgaaatactggctgtagatgcttcg
acagaacaagctggcctgatagctcccaaaactaatataaacattaaagaagtagtcact
ttagaatggtacagacacttgtcaaaggacaccgcaaaaatttcagctgcaggaatggat
gatttgggcagctctttgaaagagatgattgttttgcctttccattttcccaaaaccttc
aagaagttgggtctttctgtccctcgtggagtactgttgatgggccctccaggtgtgggg
aagactcttctcataaaggcagttgcaagggaagtgggggcgtatttgctttgcatcagt
ggtccagctatatatggctcaaggcctggagaaagtgaagagaatttgcgaagagttttt
gaacaaggcagggaattgtccagtgaaggaccaaccattctctttattgatgaaattgac
tctttgtgccctaaacggggaagttcaaacagcatccctgaaaatcgtattgttgctcaa
ttgttaactcttatggacggcataggcagtgaaaatgagatggtcgtcatggcagcaaca
aacaggcccgatgccttagatcctgcactgagaagacatggtagatttgaccgagaggtt
atcattgggacaccaacacttaaacagagaaggtctattctacagttgattacttctaat
atgcctatttccactgatgttgatttgatcaacctagcagaaatgacaactggatatgtt
ggagctgatcttacggcactctgcagagaagctgctatgcaggctgtcctccacagctgt
ttggattcagttcgcacgttgattaacatggcagatttccatgaagcttttaaaaagatt
cagccatcttcctttcgaagcagtgttggactaactgactttaaacctgttacctgggaa
caaattggtggtcttgaagatgtgaaattaaagttaaaacagagtattgagtggcctatg
aagtttcctcaggcttttgtgaggatgggattgtctcagccaaagggtattctcctatat
gggccaccgggatgtgccaaaaccactctggtgaaggctgtggccacaagctgccattgt
tcctttctttctgttagtggtgctgaccttttttcaccttatgttggagattcagagaag
attttgtctcaggtttttcgacaagcaagagcacatactccagcaataatattcctggat
gagattgattctatcctaggatctcgatcagcctgcaaaactggacatggtgccccagag
aaggttctttctgtccttcttaatgaactagatggtgttggcattaaagtcacagagaga
agaggaaataaattacaacttgaaggtgattgtcaagaacaaaatgaaaaggagagacag
atagcgtttcaagaagttttgaacaaagatgtcatgatagttgctgcaacaaatagacca
gacaagttggatgatgccttgttgcgccctggaaggttagacaagatcatctatattcca
cctccagatcagaagggaaggctttctattttgaaaatttgcacagaaaaaatcccaata
gattctgatgtgtcattagaacacctagcagttcaaaccaaactcttttctggagccgat
attgaaaatctctgcaaggaggctgctttgcaggcattacaagagaatggacttgaagca
actagtgtgaaacatgagcattttgtaaaatcactgaagactgtaaaaccatcattaacc
ctcacagatttggatttttatgaaaaattatttaataaggaagtatcctcttaa
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