Trachemys scripta elegans (red-eared slider): 117884106
Help
Entry
117884106 CDS
T07347
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117884106 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117884106 (USP42)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117884106 (USP42)
Peptidases and inhibitors [BR:
tst01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117884106 (USP42)
Ubiquitin system [BR:
tst04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117884106 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117884106
NCBI-ProteinID:
XP_034640115
LinkDB
All DBs
Position
10:15359132..15399191
Genome browser
AA seq
1402 aa
AA seq
DB search
MTIVDKVSESSNLAACQKQPCSSVVPSTGDMDSASASWGAVSSLEVPKHKITLGPVPGAA
VYSSSSVPDKSKPSSQKDQSLSDGIAPPQKVLFPAEKICLKWQQTHRVGAGLQNLGNTCF
LNSALQCLTYTPPLANYMLSHEHSKTCHEQGFCMMCTMQAHITQALSNSGNVIKPMAVIN
DLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSNKLDRHTQATTLIYQIFGGYLRSR
VKCMNCKGVSDTFDPYLDITLEIKTAQSVNKALEQFVKPEQLDGENAYKCSKCKKMVPAS
KRFTIHRSSNVLTLSLKRFANFSGGKITKEVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFSCHAGHYYCYIKASNGQWYQMNDSIVSNSDIRSVLNQQAYVLFYIRSHDMKNGGEH
PHSIHTPGQSSPRPVISQRVVNSRQGASGFIGPQLPPHMIKNSSHLNGTGSLKETPSSSV
ASASNVTLNRPASAPPSTSIQNWTINRPTIPDPSKKQKITISIHNNKLPTRQTLSQPNLH
NSLENLSKPVPSSTITNSSAVKSTSSAPTMSVATKVSKQTTPSESCSKPLMNGKSKLNSS
TLVPYGAESSEESDEESKGLVKENGHSKSFNGILIGNVVSTLQNSCSSCQDAEEVVSQHE
LPKNVTVNGAISIDSDPEENGLKFDESTCQVKPVKSTEIPFSKVNGLHGKIIPTALPPVP
EDRILESFRYNQLKSLSEEISATGLEKTSENDGHIETLVSGNNTISYEKSSKVPTNLSCN
VQNPFTTSDGETISTKEEIAESIVSKPDNAHSDISGQCNTKKISLGIDDEFSKQCDPKDY
ADKIRGTQDLKMTLKESPLHIRGSAETAEKLGQSPFTKSDNECSSKKLVALNIKDECQET
KESANNYTDVPPTNDSSATRLDKVLESHYSKENDGLDGNEICEENKDRQKIKSHSPVKER
NCTPKKIDKGHYRTKRERSESEEQEKQTKRKPDDDYSKKRQSYSKESMKQDRYKQEHCNG
NKYKLTHSERNSPDNGRSLGKYTYYRSRSRGKTDQERSRYYHSKRERSWSRERYYQDIPR
RWDKCRYYNDYHPYAARDGRERKFFHGDRDYDKSSQVYNIRSYRDYYYTSRWNHEPVAKE
REKHHFGSSKIDLYNCSAPSQHSEKYSHEKCASMSEENNSSFEMSCHKYEYLKDRKRKCA
SLEGSDSDVEKKHRSLQSEPTEEQKVKKHKKSKKKKKSKDKHREKDERYRQDSDFSGACS
DSDIHKHKKKKKKKKKHTKKSEGFLEYLDPNIQKAAGSETNKTWEKKEFHCTDDPPSEEY
SKHGSKWPHEGGDADSCHKTKYIGGGQENSYHISKEYSKAIDLLCHKDHGHTVIKSLDGN
FAYTDETRWKIQSVLMEAIPTV
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagtatctgagtcttcaaaccttgcagcttgtcagaagcagcct
tgtagctccgtggtaccctctactggagacatggactcagcctctgcaagttggggtgct
gtatcatctttggaagttccaaagcacaagatcactttgggaccagtacctggtgctgca
gtttattctagttcatctgtacctgataaatccaagccttcatctcagaaagatcaatct
cttagtgatggcattgctccgccacagaaggttctttttccagcagagaagatttgtttg
aaatggcagcaaacgcacagagttggagctggactccaaaatcttggcaatacatgtttc
ctcaactctgctctgcagtgtttgacttatacaccccctcttgccaactacatgctttct
catgaacactccaaaacatgccatgaacaaggattctgcatgatgtgtacaatgcaagct
cacattacgcaggcgctctctaactctggcaatgttatcaaacctatggctgtcatcaat
gatcttagacggatagcaaaacatttccggtttggaaatcaggaagatgcacatgaattt
ctacgctacactgttgatgctatgcagaaagcatgtttgaatggaagcaacaaattggac
agacatacccaagctaccacactcatctatcaaatatttggagggtacttaagatcaaga
gtaaagtgtatgaactgcaaaggagtctcagataccttcgatccataccttgatattaca
ttggagataaagacagctcagagtgtaaacaaagctctggaacagtttgtgaagcccgaa
caactggatggtgaaaatgcctataaatgtagcaagtgtaagaagatggttcctgcttca
aagaggtttacaatacatcggtcttctaatgttcttacattgtctctgaaacggtttgca
aattttagtggtggaaaaattaccaaggaagtgaaatatcctgagtatctggatattcga
ccatatatgtctcaaccaaatggagaaccaatcatttatgttctatatgcagtcctggtg
catactggtttcagctgtcatgcaggacactactactgctatataaaggccagtaatggg
cagtggtaccagatgaatgattctattgtgtccaacagtgacatcagatctgtgcttaat
cagcaagcttatgtgctcttttatatcaggtcccatgatatgaaaaatggaggagaacat
ccccattccattcatacaccaggacagtcttctccccgtccagttatcagtcagcgagtg
gttaatagcaggcagggggcatcaggatttataggaccacagcttcctcctcacatgatt
aagaattccagtcatttaaatggaactggatcactaaaagaaactccaagcagttctgtg
gcaagtgctagcaatgttaccctaaacagaccagcttcagctccaccttcaacttccatt
caaaattggacaattaacagacccactattcctgatccttcgaaaaaacagaaaatcact
atcagtattcacaataacaaattgcctactcgccaaactctgtctcaacccaaccttcat
aattctttggagaatctcagcaagcctgttccttcgtccacgattacaaattcctctgca
gtaaagtctacctcaagtgcacctacaatgtcagttgctactaaagtatctaaacaaaca
actcctagtgaatcttgttctaagccattaatgaatggcaagtctaaactaaactctagt
acgttggtcccttacggtgcagaatcttcagaagaatctgatgaggagtcgaagggatta
gttaaggagaatggccactcaaaatcttttaatggaattttgattggaaatgtagttagt
acattacagaactcttgttcttcctgtcaagatgctgaagaggttgtatcccagcatgaa
ctgccaaaaaatgttacagttaatggtgctattagtatagatagtgatcctgaagaaaat
ggattgaaatttgatgaatctacttgccaagtcaagcctgttaaatctacagaaattcca
ttttctaaagtgaatggattgcatggaaaaataatacctacagctttgccaccagttcct
gaagatagaattttagagtctttccgatataaccagttgaaaagcttgtcagaggaaata
agtgcaactggacttgaaaaaacttctgaaaatgatggtcatatagaaactttagtgagt
ggcaacaatactatttcctatgagaagtctagtaaagttcccactaacctgagctgcaat
gtccagaatccctttactacatcagatggtgagaccatttctaccaaagaagaaattgcc
gaaagtattgtatcaaaacctgataatgcacattctgatatcagtggtcagtgtaacact
aagaaaatatccctgggaattgatgatgaattctctaaacagtgcgatcccaaggattat
gcagataagataagaggaacacaagacttaaaaatgactttgaaggagagccctctgcac
atcagagggtctgcagagactgcagagaaattggggcaaagccccttcacgaagtctgac
aatgaatgtagttctaaaaaacttgtagctctaaacattaaagatgaatgccaagaaaca
aaggagagtgctaataattacacagatgtaccacctactaatgactcttctgctacaagg
ttggataaagttttagagagtcattattctaaagaaaacgatggactggatggtaatgaa
atatgtgaagaaaataaggataggcaaaaaattaagtctcattctccagtcaaggaaaga
aattgcacccccaaaaaaattgacaaagggcattaccgtactaaaagagagcgctctgaa
agtgaagagcaggagaagcaaaccaaacgcaaaccagatgatgattattccaaaaaaagg
caatcctacagcaaggagagtatgaagcaagatcgctataagcaggagcactgcaatgga
aataagtacaaacttacgcatagtgaaagaaacagccctgataatggcagaagtttagga
aaatacacctattacagatcccgaagtagagggaaaactgatcaggagaggagtagatat
taccattctaaaagggaaagatcttggagtagggaaagatattaccaagatataccaagg
agatgggacaagtgcagatattacaatgattatcatccttatgcagcaagagatggtaga
gagagaaaattctttcatggggacagagactatgacaaatcaagtcaggtttacaacatt
aggtcatatagggattattattacacaagcagatggaatcatgaaccagtagctaaagag
agagagaaacatcattttggcagctccaaaatagatttatataattgctcagctccctct
cagcactctgaaaaatattcccatgaaaaatgtgcatccatgtctgaagaaaacaattca
agttttgagatgtcttgccacaaatatgaatatctaaaagacagaaaaagaaaatgtgct
agtctagaaggtagtgacagtgatgtggaaaagaaacacaggagtttgcaaagtgagcca
acagaagagcaaaaagtgaaaaaacacaagaagtcaaagaaaaaaaagaagtccaaagat
aaacaccgagagaaagatgagagatatcgccaggattcagacttctctggggcctgctct
gattctgacatccacaaacataagaaaaagaagaagaaaaagaagaaacatacaaagaaa
tctgagggctttcttgaatatttagatcctaatatccagaaggctgctggctctgagact
aataagacatgggagaaaaaagaatttcattgtacggatgaccctccatctgaagaatat
agtaaacatgggagtaaatggcctcatgagggaggggatgctgattcctgtcataaaaca
aaatacataggaggaggccaggaaaatagctatcacatatctaaagagtatagcaaagct
atagacctactttgtcataaggaccatggacacacagtcattaaatctttggatggcaac
tttgcatacacagatgaaaccagatggaaaattcaaagtgtgttgatggaagccatccct
acagtttaa
DBGET
integrated database retrieval system
