Trachemys scripta elegans (red-eared slider): 117884126
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Entry
117884126 CDS
T07347
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117884126 (CHD2)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117884126 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
117884126
NCBI-ProteinID:
XP_034640155
LinkDB
All DBs
Position
10:73892833..73979887
Genome browser
AA seq
1838 aa
AA seq
DB search
MMRNEDKSQGEEGSVHSNASSHSASEEASGSDSASQSESEQGSEQGSEHGSETNSSSESS
ESQSESESESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKEEASSESENESPKRRGQKQMRKPGKWKREASGEEEDENGGEQGSSADSEPEQKKV
KARRPVLRRAVVKASVKKPHKPQRGKRRKKQDSSEDEDDDEDDETPKRQTRRRAAKNVSY
KEDDDFETDSDDLIEMTGEGADEQQDNSETIEKVMDVRIGKKGATGASTTVYETEANGNP
SADFDPEKDEGEVQYLIKWKSWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWL
AKVTPEDVEYFSCQQELAAELNKQYQIVERVIAVKTSKSAMGHSEFPAHSRKLSSNEPEY
LCKWMGLPYAECSWEDEALISKKFQHCIDSFNHRNNSKTIPTRDCKVLKQRPRFVALKKQ
PSYIGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFYQHQLY
GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDMMSRNTIREYEWIHSQTKRLKFNALI
TTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSL
KELWSLLHFIMPEKFEFWEDFEDDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKV
EQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEE
NERETGMEMLMSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYP
FQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN
DLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDN
NSGRSNSNPFNKEELTAILKFGAEDLFKEIEGEESEPQEMDIDEILRLAETRENEVSSSA
TDELLSQFKVANFATMEEEETELDERSQRDWDDIIPEEQRKKVEEEERQKELEEIYMLPR
IRSSTKKAQANDSDSDAESKRRIHRSSGSESETDDTDDDKRPKRRGRPRSVRKDTVEGFT
DAEIRRFIKAYKKFGLPLERLECIARDAELVDKSIADLKRLGELIHNSCVSAMQEYEEQL
KENPGEGKGPGKRRGPTLKISGVQVNVKSIIQHEEEFEMLHKSIPTDPEEKRKYCLTCRA
KAAHFDVDWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQT
RVDYLLKLLKKDLEKKETVKDGEETKLKKRKPRVKKENKAPKVKDEHGNDLSSPRHSDNQ
SEEGEVKEDGLEKSPVKKKQKKKENKENKEKQSTTKKEKEGDKEKKKTKDKKEKAKGSET
KSGSKGKRSQGPVHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKG
LTVQEQLEHTRNCLLKIGDRISECLKAYSDQEHIKLWRRNLWIFVSKFTEFDARKLHKLY
KMAHKKRSQEEEQEQKKKEDMAGSKRLFRPEPSGSSRDSLMSQSHLPPNPHSQKLHLPPS
HPQQMHGHQRDNYSHPSKRHFSNADRGDWQRDRKFNYGGNSNQVWGGERHHQYEQHWYKD
HHYGDRRSRGDPHRSSGNYRPNNLSRKRPYEQYNSDRDHRGHRDYYDRHHHDSKRRRSDE
FRPQNYHQQEFRRMSDHRPPMGYHGQGPSDHYRSFHTDKSGDYKQPLPPPHSQLSDPRSP
PSQKSPHESKSPLDHRSPLDRSLEQKNNPDYNWNVRKT
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaatgaggacaaaagccaaggagaggagggttcagtacacagcaatgcatcg
agtcactcagcatctgaagaggcctctggctccgactctgcaagccaatctgaaagcgag
caggggagcgaacagggcagtgagcatggcagtgagacaaacagcagctcagagtcctcc
gaaagccagtctgaatctgaaagcgagtcaacaggttcgaaatcccagcagaccccacct
gaaaccaaagaaaaaccagccagcaagaaggaaaggatagcagatgtaaaaaagatgtgg
gaagaatatcctgatgtttatggggttaggagatcaaaccgaagcagacaagaaccatcg
cgatttaatataaaagaagaggcaagtagtgaatctgaaaatgagagcccaaaaagaaga
ggccagaagcaaatgagaaaaccaggtaaatggaaaagggaggcttctggggaagaggag
gatgaaaatggtggggagcaaggctccagtgcagatagtgaaccagaacagaagaaagtt
aaagccaggagaccagttctgagaagagcagtggtcaaagccagtgttaaaaagccccac
aagccccaacgtggtaagaggagaaagaaacaagactcgtctgaagatgaagatgatgat
gaagatgatgagactcccaaaaggcaaacccggcgcagagcggccaaaaatgtcagttac
aaagaagacgatgattttgagacggattccgatgacctgattgagatgactggggaaggg
gccgatgaacagcaggacaacagcgagaccattgagaaagtcatggacgtaaggattgga
aagaaaggagccactggtgcttccaccactgtgtatgagactgaagccaacggcaacccc
agcgctgactttgaccctgaaaaggatgagggagaggttcaatacttgatcaagtggaag
agctggtcgtacattcacagcacatgggagagcgaagagtccctgcagcagcagaaggtg
aagggcctgaaaaaattagagaacttcaagaaaaaagaggatgaaatcaaacaatggcta
gccaaggtaactcctgaagacgtggaatacttcagctgccaacaggagctcgctgcagag
ttgaacaaacagtatcagatagtggagagagtgatcgctgtgaagaccagcaagtctgca
atgggacattctgagttcccagctcacagtcggaaattgtcctctaatgagcccgaatat
ctgtgcaagtggatggggttgccgtatgcagagtgcagctgggaagatgaggccttgatt
agcaagaagtttcaacactgcattgacagcttcaaccatcgcaacaactccaaaaccatt
cccactcgggactgcaaggtgttgaagcagagacccaggtttgttgctttgaagaaacag
ccttcttacattggtggcgagaacctggagctccgagattaccagctggaggggctcaac
tggcttgctcactcgtggtgcaagaacaacagcgtgatcttggctgatgaaatgggcttg
gggaagactatccagacaatatcattcctctcctatctcttctatcagcatcagctgtat
ggccccttcctgatagtggtgcccttgtccactctgacctcatggcagagagagtttgaa
atctgggcaccagagattaacgtggtcgtttacataggagacatgatgagcagaaacacg
atccgtgaatatgagtggatccattctcagactaaaaggctgaagttcaatgcacttatc
acaacatatgagatcctcctcaaagataagactgttctgggcagcattaattgggccttt
ctgggtgtggacgaagcccatcggttgaagaacgatgactctttgctgtataaaactctg
attgatttcaagtccaaccacaggctcctgatcactgggaccccgcttcagaattctctc
aaagagctctggtcactgctgcactttatcatgccggagaagtttgagttctgggaggat
tttgaagatgatcatgggaaagggagagagaatggctaccagagccttcacaaagtcctg
gagcctttccttctgcgcagggtgaagaaggatgtggagaaatccctgccggccaaagtg
gagcagattctccgggtggaaatgtctgccctgcagaagcagtattataagtggattttg
acaagaaattacaaggctctctcgaaggggacaagaggaagtacatctggcttccttaac
atcgtgatggagctgaaaaagtgctgcaaccactgctatctcattaaacctccggaagaa
aacgaaagggagactggcatggagatgctgatgtctctaatcaggagcagtggaaagcta
attctcttggacaaactgctgaccaggctgcgtgagaggggtaacagagtcctgatcttc
tcccagatggtgagaatgctggacatcttggcagagtacttggctatcaagcactaccct
ttccagcgcttggacggctcgatcaaaggggagatccgaaagcaagcactggatcacttc
aacgcggaaggctctgaggacttctgtttcctgctgtcaacacgagctggcggactgggg
attaacctggcttctgcagacactgtggtgatctttgactcggactggaacccccagaat
gacttgcaggctcaggctcgggctcacagaattggacagaagaaacaggtgaacatttac
cgcttagtcacaaaggggacagtggaagaggagatcatcgaaagggccaagaaaaagatg
gtgttggatcatctggtgatccagcgtatggacaccacaggccgtactgtactggataac
aactctgggagatccaactcaaatcctttcaacaaagaggagctgacagctattctgaag
tttggagctgaggatctcttcaaggagattgaaggggaagaatcggagccgcaggaaatg
gatattgatgagattttacgcttggctgaaacacgagagaacgaagtgtcctcgagcgcc
acggatgagctgctgtctcaattcaaggtagccaattttgcaaccatggaggaggaagag
actgagctggatgagaggtcccagagggactgggatgatattattcctgaagagcaaagg
aagaaagtggaggaggaggaacggcagaaggaattggaagaaatctatatgctgcccaga
attcgcagctccactaaaaaggctcaggcaaatgacagtgattctgatgctgaatccaag
agaaggatacacaggtcatctggatcagagagtgagacggacgatactgacgacgataaa
aggccgaagcgccgggggcgcccacggagtgttaggaaagacacggtggaaggatttact
gatgctgaaatcaggaggtttatcaaggcttataagaagtttgggcttccactcgaacgg
ctggagtgcattgctcgcgatgctgagctggtggacaagtccatagctgatctgaaacgt
ctaggggaacttattcacaacagctgtgtgtcggcaatgcaggaatatgaggagcagctg
aaagaaaaccccggtgaggggaaagggcctgggaaaaggaggggtcctaccctcaagatc
tctggtgtccaagtcaacgtgaaatccatcatccagcatgaagaagagtttgaaatgctg
cacaaatccattcccacggacccggaggagaagaggaaatactgcctgacctgccgcgcc
aaagctgctcattttgatgtagactggggagtggaggatgattctcgtttattgctggga
atttatgaacatggctatggaaactgggagctaattaaaacggacccagaactgaagtta
actgataagatcctacctgttgagacagataagaagcctcagggaaagcagctccagacc
cgtgtcgattatctgctgaaattgctgaaaaaagatctggagaagaaggaaactgtgaaa
gatggggaagagaccaaactgaagaagaggaaaccacgcgtgaagaaagagaacaaagct
cccaaagtcaaagatgagcatggaaatgacctgtcctctcctcggcactcggacaaccag
tcagaagagggtgaagtcaaggaggatggcttggaaaagagcccagtgaaaaagaaacag
aagaagaaagagaacaaagagaacaaggaaaaacagtcaaccacaaagaaagaaaaggaa
ggcgataaagagaaaaagaaaacaaaggataagaaagagaaggccaaaggtagcgagacc
aagtctggaagcaaagggaagcgatctcagggtcctgtccacattacagcagggagtgag
cccatccccattggagaagacgaggatgatgacctggaccaggaaacgttcagcatatgc
aaagagaggatgaggccagtgaaaaaggcactgaagcaactggacaagccagataaggga
ctgacagtgcaagaacagctggagcatactcgcaactgcctcctgaaaattggagatcgc
atctcagagtgccttaaagcctactctgaccaggagcacatcaagctgtggagaaggaac
ctgtggatatttgtgtccaagttcacagaatttgatgctagaaaattgcacaaactctac
aaaatggctcacaaaaaaagatcacaggaagaggagcaggagcagaagaagaaggaggac
atggctggcagcaaaaggctattccgcccagagccttctggctccagccgggattccctc
atgtctcagtctcacctgcctcccaaccctcattctcagaaactccacctgcctccctcg
caccctcagcagatgcatgggcaccagcgggacaactacagccaccctagcaagagacac
ttcagtaacgcagatcgaggagactggcagagagatcggaaatttaactatggtggcaac
agcaaccaggtctggggtggagaacggcatcaccagtacgagcagcactggtacaaggat
caccactacggggatcgtcggtctcgcggcgacccccaccgaagctccgggaactaccga
ccaaataacctctcccgcaagaggccgtatgagcagtacaacagtgaccgagaccacagg
ggacaccgagattattacgacagacaccatcacgattccaagcggcgaagatctgatgag
ttcaggccccagaactaccaccagcaggaattcagaagaatgtctgatcacaggccaccc
atgggataccacggccagggaccttcagaccattaccggtccttccatacagacaaatca
ggggattacaaacagccgcttccccctcctcactcccagctctcggaccctcgctcaccc
ccgtctcaaaaatcccctcatgagtccaagtcacccctggatcacaggtcgcccctggac
aggtcgttagaacagaaaaacaatccagattataactggaatgttcgaaaaacataa
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integrated database retrieval system
