Trachemys scripta elegans (red-eared slider): 117884134
Help
Entry
117884134 CDS
T07347
Symbol
CHSY1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tst01100
Metabolic pathways
Module
tst_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117884134 (CHSY1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tst01003
]
117884134 (CHSY1)
Enzymes [BR:
tst01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
117884134 (CHSY1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
117884134 (CHSY1)
Glycosyltransferases [BR:
tst01003
]
Glycan extension
O-Glycan
117884134 (CHSY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
117884134
NCBI-ProteinID:
XP_034640176
LinkDB
All DBs
Position
10:complement(78300739..78413886)
Genome browser
AA seq
800 aa
AA seq
DB search
MAGRSRRSWLSVLLGLVLGFILASRLILPRASELKKAGQRRKASPEGCRLQQGGGLLRRD
SRGTLLWPQDPAERQDDIPPASNFLFVGVMTAQKYLQSRAVAAYRTWSKTIPGKVEFFSS
EGSDTSLPIPIVPLQGVDDSYPPQKKSFMMLKYMHDHYLDNYEWFMRADDDVYIKGDRLE
SFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGEC
LREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIKDLRNSKIHRAIT
LHPNKNPPYQYRLHSYMLSRKIAELRYRTIQLHREIVLMSKYSNAEIHKDDLQLGIPPSF
MRFQPRQREEVLEWEFLTGKYLYSAADGQPPRRGMDSSQREALDDIVMQVMEMINANAKT
RGRIIDFKEIQYGYRRVNPMYGAEYVLDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQF
MEHEEIDAKELASKINQDSGSLSFLSNSLKMFVPFQLTGSKAERKEPKDQKINILIPLSG
RFEMFARFMGNFEKTCLIPSQNVKLVVLLFNSDSNPDKAKQVELMRDYRIKYPKADMQIL
PVSGEFSRALALEVGSSQFKNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPVIFSQ
YDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLLRAGGFDVSIQGWGLEDVD
LFNKVIQAGLKTFRSQEIGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAELWL
EKNDPSFGKSSNTNGSVRTA
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggctggcagaagccgccgctcctggctcagcgtgttgctaggactcgtcctgggcttc
atcctggcgtcaagactcatcctgccccgcgcctcggagctgaagaaagcgggacagcgg
cggaaggcgagcccggagggctgccggctgcagcagggcggggggctgctgcgcagggac
tcccgggggacgctgctctggccccaggaccccgcagagcgccaggacgacatcccgccg
gccagcaactttctcttcgtgggggtcatgacagcccagaaatacctgcagagccgggcc
gtggctgcctacagaacctggtccaaaaccattcctggcaaggttgaattcttctccagt
gagggttcggacacctctcttccaatcccaatagtgccactacaaggcgtggatgactcc
tacccaccccagaagaaatcctttatgatgctcaagtacatgcatgaccactacttggac
aattatgaatggtttatgagagcagatgatgatgtttacattaagggggacagattggag
agcttccttaggagtttgaacagcagtgaacccctcttccttggacagactgggcttggc
accaccgaagagatggggaaactggccttggaacctggcgagaacttctgcatgggagga
cctggagtgatcatgagccgggaggttctgcgcagaatggtgcctcacattggcgagtgc
ttgcgagagatgtacaccactcatgaggacgtggaagtgggaagatgtgtgcggaggttt
gcaggagtgcagtgtgtctggtcttatgagatgcagcagctgttttatgaaaattatgag
cagaacaaaaaaggctacatcaaagaccttagaaatagcaagatacaccgagctataacg
ctgcatcccaacaagaacccaccgtaccagtatagacttcatagttacatgctgagtcgc
aaaatcgcagaactgcgttaccggactatacagctgcacagagaaattgtcctgatgagc
aaatacagcaatgcagaaatacacaaagatgaccttcagctggggataccaccttctttt
atgaggttccagccacgccaacgtgaggaggtcttggaatgggagttccttacgggaaag
tatctctattctgcagctgatggacagccccctcggagagggatggactcatctcagcgt
gaagcattggatgacattgttatgcaggtcatggaaatgatcaatgcaaatgctaagacc
agagggcggatcattgatttcaaggagatacaatacggctatcgtagagttaatcctatg
tatggagcagagtatgttcttgacttattgcttctatacaaaaaacacaagggaaagaag
atgaccgtgcctgtcagaaggcatgcctacctacagcagacattcagcaagatccagttt
atggagcatgaagagatagatgccaaagagctggccagcaaaattaaccaagattctgga
tccttgtctttcctgtccaattcactgaagatgtttgttccattccagctcactggatcc
aaagcagagcggaaggagcccaaagaccagaagatcaacatcttgattcctctgtccgga
cgctttgagatgtttgctaggttcatggggaattttgagaaaacttgcctcattcccagt
cagaacgtcaagctggtcgtcctgcttttcaattctgactcaaaccctgataaggcgaag
caagttgaattgatgagagattaccgtattaagtaccccaaggctgatatgcagatcttg
ccagtgtctggggaattctcaagagctctggctcttgaagttggatcttctcagtttaaa
aatgagtctttgctcttcttctgtgacgttgacctagtgtttaccacagagtttctccaa
cgatgtagagccaatacagttttgggccaacaaatatactttccagtcatctttagtcag
tatgatccaaagatagtttatagtggaaaagttcccagtgacaatcattttgccttcacc
cagaaaacaggtttctggaggaactatggctttggcattacttgtatttacaaaggtgat
ctccttagagcaggtggctttgatgtctctatccaaggttggggccttgaggacgtggac
ctatttaacaaagtcattcaagctggcttaaagactttccgaagccaagaaatcggagtt
gttcatgtacatcatccagtcttttgtgaccccaatcttgatccgaaacaatataaaatg
tgcttggggtccaaagcttcaacttatgggtccacacaacagttggctgaactatggctt
gaaaaaaatgaccctagctttgggaaaagcagcaatactaatggctcagtgaggacagcc
taa
DBGET
integrated database retrieval system
