Trachemys scripta elegans (red-eared slider): 117884148
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Entry
117884148 CDS
T07347
Symbol
ACAN
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tst00535
]
117884148 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117884148 (ACAN)
04091 Lectins [BR:
tst04091
]
117884148 (ACAN)
Proteoglycans [BR:
tst00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
117884148 (ACAN)
Glycosaminoglycan binding proteins [BR:
tst00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
117884148 (ACAN)
Lectins [BR:
tst04091
]
C-Type lectins
Lecticans
117884148 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
hEGF
EGF_TEN
EGF_CA
I-set
Antimicrobial25
Ig_3
EGF_2
Motif
Other DBs
NCBI-GeneID:
117884148
NCBI-ProteinID:
XP_034640193
LinkDB
All DBs
Position
10:complement(71068210..71147359)
Genome browser
AA seq
1842 aa
AA seq
DB search
MTTLLLVFVCLRVITAAISVEVSDHGNTLSVSIPERSPLRVILGNSLTIPCYFIDSLDHV
TTAPYTPPLTPRIKWSRLSNGKEVVLLVATEGQVRINTEYKEVISLPNYPAIPTDATLEI
KALRSNDTGVYRCEVMHGIEDSQDTIEVIVKGIVFHYRAISTRYTLDFEKAKQACIQNSA
VIATPEQLQAAYDDGFDQCDAGWLADQTVRYPMHHPREGCYGDKDEFPGVRTYGIRETDE
TYDVYCYAEDMQGEVFYATSPEKFTFQEAAEKCLSLGTRLATTGELYLAWKGGMDVCSAG
WLADRSVRYPISKARPNCGGNLVGVRTVYLHVNQTGYPHPHSRYDAICYTDEDFLVPENF
TIQTVTQTEVEIPLPHNVTEEEARGSIATLEPIDFTPTASELDEGFTVTPDLFATGITAE
TAFTEAENVTEEGVTAVWVTPEEVTTLVLDTLFTSLAPEVSSAKEDLGATATPELESASV
EETIVRVTAAPASGLIPEQPISPTGVVFHYRPATSRYSLTFTKAQQACLDNNAVIATPEQ
LQAAYQAGFHQCDAGWLRDQTVRYPIVTPRNQCVGDKDSSPGVRTYGMRPASEMYDVYCY
IDRLKGEVFFATQADQFTLLEAQEYCESQNATLASVGQLHAAWKLGLDRCRAGWLADGSI
RYPIVTPRPACGGDKPGVRTIYLHPNQTGFPDPLSRHHAFCFRALPSLDKEEFVEEQIVT
QVIPGLEEVPSGEEPTVETEFATEPENQTAWGTEVFPTDISLLSVSPSAFPPVAAIPDEP
SAETSLSGVPSGEISVSGVLETSGEPSASGWIPGESASGTFEPSGEPSGIEESGVPSVDL
DFSGLPSGLPSGDESGLPSGIIEGSGLPSGEEDLLVSASGIPDLSGVTSGLQEISGIPEI
SGLPSGEVSGVELTSGLPSGEYDESGLPSGFPTVSLVDTTLVEVVTTVAESQLEGKGTIG
VSGEGDLSGLPSAEWDISGKVSGLPSGVDISGAPSGIPDISGAPSGIPDISGLPSGIDFS
GAPSGIPDISGAPSGIPDISGFPSGIDFSGEPSGIPDISGLVDLSGLVSGVDRSGEPSGV
TFLNTSLVEVTTPSVTEAEAKKFLEISGLPSGDEDISGTVSGILDVSGQPSGQIDFSGGV
SGAPEMSGFPSGVIDISGDTSGVEVVSGLPSGVYDYSGLPSGFPTISLVDTTLVEVVTQT
SVAQEVGEGPSGILEISGLPSGERETSGEVSGVMDISGLPPGTVDISGEPSVIPYFSGEI
SGVTELSGESSAVTGVSGEASGLPEVTLVTSDLVEVVTKPTVSQELGGETAVTLPHIFES
SGDGSSSGEIGREASAFPEITVETSGFHEISIETSTAPETNAETSALPEITIEISTVHET
SGETSAVSEISIETSTVHETSDKISALPEISIETSTVYKTSGETSVLPEVNIETSGKAVV
SGETSGAPEERREDSSGTPTNPLPDVSGETSAPDVVISTSMPDTELTQEPMGPEEARLEI
QSSTPMVSEQETEIAVVLETLEISPTATAILPQVSPEATDVPEPTAEVIPKTCDEKPCGA
GTCQERDGNITCLCPPGYMGDHCDIDIDECHSSPCLNGATCADGIDSFKCLCLPSYGGDL
CEIDLEDCDEGWTKFQGHCYKHFEQRETWVEAETRCREQQSHLSSIITPEEQEFVNNYAQ
DYQWIGLSDRAVEHDFRWSDGNSLQYENWRPNQPDNFFAAGEDCVVMIWHEQGEWNDVPC
NYHLPFTCKKGTVACGDPPVVENARTFGRKKDRYEINSMVRYQCNQGYIQRHVPTIRCQP
NGHWEEPRIACIDPSIYKRRLHKRSPRNRSRTNGRAAQTPTH
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactattagtgtttgtgtgtttgcgagtcatcactgcagccatctctgtg
gaagtttcagatcatggtaacacactgagtgtgagcatacctgaacggtctcccctgcgt
gtcatcctgggaaactctctgaccatcccctgctacttcatcgactcattggatcacgtc
accacagccccctatactcctcctctgaccccaagaatcaaatggagcagactctccaat
gggaaggaagtcgtcttactagtggccacagaggggcaagttcgaatcaacactgagtac
aaggaggtgatctctctgcccaactatcctgccatccccaccgatgccaccttggaaatc
aaagcgctgaggtccaacgacactggggtctatcgttgcgaggtgatgcatggtattgag
gacagccaggatacgatagaggtcatagtgaaaggaatcgtgttccattacagagccatc
tccaccaggtacacgttggactttgaaaaggcaaagcaggcatgtatccagaacagtgct
gtcatcgctactcctgaacagctgcaggctgcctatgatgatgggtttgatcagtgtgat
gccggctggctggctgatcagactgtcaggtacccaatgcaccatccccgagagggttgc
tatggtgacaaggatgagtttcctggagtgaggacctatggcattcgggagacagacgaa
acatacgatgtttattgttacgcagaggatatgcaaggtgaagtcttctatgccacctcc
ccagagaagttcaccttccaggaagccgcagagaaatgcctcagtctcgggacccgtttg
gccaccacgggagagctgtacctggcatggaagggtggcatggatgtgtgcagtgcaggc
tggctggcagaccgcagcgttcggtatcccatctccaaggcacgtcccaattgcggcggg
aacctggtgggggtgcggacagtgtacctccatgtcaatcagacggggtaccctcacccc
cattcacgctacgatgcgatctgctacacagatgaggactttttagtccctgaaaacttc
accatccagaccgtcacccaaaccgaagtggagatacctcttccacacaatgtcacagag
gaggaagcccgaggcagcattgcaactctagagccaatcgacttcacacccactgcctca
gagctagatgaaggcttcacagtcactccagatctctttgccactggtatcactgccgag
acagctttcacagaggcagagaatgtgactgaagagggagtcacagctgtatgggtgact
cctgaagaggtcaccaccttggtcctggacactcttttcaccagtttggcaccggaggtg
agctcagcgaaggaggacttgggggcgactgccacgccagaactagaatctgcctcagtg
gaagagacgattgtgcgtgtgacagccgctcctgcgagcggtctcattcctgagcagccc
atttctcccactggtgtcgtgtttcattaccgaccagccaccagcaggtattccctcacc
ttcaccaaagcccagcaggcctgcctggataacaacgctgtcatcgccacacccgaacaa
ctgcaggctgcctaccaggctggctttcatcagtgtgacgccggctggctgcgggatcag
actgtcagataccccattgtgaccccacggaatcaatgcgtaggagacaaggacagctcc
ccaggcgtgcggacgtatggcatgcgcccagcttctgagatgtacgacgtgtactgctac
attgaccgactgaagggtgaggtgttctttgcaacccaagcagatcagttcaccctccta
gaagcccaggaatactgtgagagccagaatgccaccctggcctctgttgggcaactccat
gccgcctggaagctgggcctggatagatgccgcgctggctggcttgctgatggcagcatc
cgatatcccattgtgaccccacgtcctgcttgtgggggagacaaacctggtgtgagaacc
atctacttgcaccccaaccagacgggattccctgacccactgtcaaggcaccatgccttc
tgtttcagagccctgccatctctggacaaggaggaatttgttgaggagcagattgtaacc
caggtgatccctggcttggaggaagtaccctctggggaggagccaactgtggaaacggag
tttgccactgaacctgaaaatcagacggcgtggggaacagaagtctttccaactgacatt
tccttgctatcagtgagtccatcagctttcccccctgttgctgcaataccagatgagccc
agtgcagagacttctctcagtggagtgccttcaggggagatatctgtgtctggagtactt
gaaaccagtggtgaaccatcagcttctgggtggatacctggagaatcagcttctggaaca
tttgaacctagtggagagccctcagggatcgaagaaagcggagtgccatctgtagacctg
gatttcagtggacttccttctggactgccatctggggatgaaagtgggctgccctcgggc
attattgaaggcagtgggttaccttctggcgaggaagacctattagtatctgcttctgga
atcccagaccttagtggggtaacatctggattgcaagaaatcagtggaattccagaaatc
agtgggctaccttctggagaagtctctggtgttgagcttactagtggcttgccatctgga
gagtatgatgaaagtggactcccatctggttttccaactgtctctcttgtggatactact
ttggtggaagttgtaacaacagtagcagaaagtcaactggaaggaaaaggaacaattggg
gtcagtggagaaggagacctatcagggttaccctctgctgaatgggacattagtggaaaa
gtcagtgggttgccctcaggagttgatatcagtggagcaccatctgggatacctgatatc
agtggagcaccgtctgggataccagatatcagtgggttaccctcaggaatcgatttcagt
ggagcaccatccgggataccagatatcagtggagcaccatctgggatacccgatatcagc
ggctttccctcaggaattgatttcagtggagaaccatctgggatacctgacataagtggc
cttgtagacctaagtggccttgtttctggtgttgatagaagtggagagccctcaggcgtt
acctttttaaataccagtttggttgaagtgaccaccccatcagttacggaagcagaagca
aaaaagtttttggaaatcagtggattgccctctggggacgaagatatatcaggcacagtg
tctggaattttagatgttagtggtcagccttctgggcaaatagacttcagtggaggggtt
tctggagctcctgaaatgagtggatttccaagtggagtaattgacatcagcggagatact
tctggtgttgaggttgttagcggcctgccatctggagtttatgattatagtggactccca
tctggctttcccactatctctcttgtggatacaactttagtggaagttgtaactcagaca
tctgttgcacaagaggtaggagaaggcccatctgggatattagaaatcagtggacttcct
tcaggggaaagagaaacatctggagaagtgtctggagttatggatattagtgggttacca
ccagggacagtagacatcagtggagagccatcagtcattccatattttagtggagaaatt
tctggagtcacagagttaagtggagagtcctcagcagtgactggagttagtggagaggcc
tccggacttccagaagtcaccttggtcacttctgatttggtggaagttgtgacaaaacca
acagtttcacaggagctaggtggagaaacagctgtgacacttccccatatttttgagtca
agtggagatggctcttcatctggggaaattggtagagaggcctctgcatttcctgaaatt
actgtagaaacatctggatttcatgaaattagcatagaaacatctacagctcctgaaact
aatgctgaaacatctgcattgcctgaaattaccatagaaatttctacagttcatgaaacc
agtggtgaaacatctgcagtatctgaaattagcatagagacttctacagtacatgaaacg
agtgacaaaatatctgcattgcctgaaattagcatagaaacttctacagtttacaaaacc
agcggtgaaacatctgtattgcctgaagttaacatagaaacatctggcaaagctgtggtc
agtggtgaaacttctggagcaccggaagagaggagggaagattcttcaggaacacccaca
aacccactcccagatgtttcaggggaaacctctgcaccagacgttgtaattagtaccagt
atgccagacactgaattaacacaagagcccatgggtcctgaagaggcccggcttgaaata
cagtcctctactcccatggtatcagaacaagagaccgaaatagctgttgttctagaaact
ttagagatatcacccactgccactgctatcttgcctcaagtttcaccagaagccaccgat
gtgccagaacccactgcagaagtcatacccaagacatgtgatgagaagccctgtggagct
ggaacctgccaggaaagagacggaaacatcacctgcttgtgcccgccggggtacatgggt
gaccactgtgatatagacattgatgagtgccactcaagcccctgtctgaatggagctacc
tgcgctgatggcatcgactctttcaaatgcttatgccttcccagctacggaggggacctg
tgtgagatcgacctggaggactgtgacgagggctggaccaagttccagggccattgttac
aagcactttgaacagagagagacgtgggtggaagctgagacccgatgccgggaacagcag
tcccacctgagcagtatcatcactccagaagaacaagagtttgtgaacaactatgcccag
gattaccagtggatcggactcagtgacagggctgtcgagcacgacttccgctggtctgat
ggaaactcccttcaatatgagaactggcggcccaaccagcccgacaacttctttgccgca
ggagaggattgtgtggtgatgatctggcatgagcaaggcgagtggaatgatgtcccatgc
aactatcacctcccgttcacgtgcaagaaaggaacagttgcctgtggggaccctcctgtg
gtagagaacgccaggacctttggaaggaagaaggaccgatatgaaataaactccatggta
cggtaccagtgcaaccagggctacatacaacgccatgtgcccacaattcggtgccagccc
aatggccactgggaggaaccacggatagcctgcatagatccctccatctacaaacgcaga
ctacacaagaggagcccaaggaatcggtcgagaaccaatggcagagccgcacagacaccc
acccattag
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integrated database retrieval system
