Trachemys scripta elegans (red-eared slider): 117884211
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Entry
117884211 CDS
T07347
Symbol
BRAT1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X1
KO
K23112
BRCA1-associated ATM activator 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117884211 (BRAT1)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117884211 (BRAT1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Ric8
RTP1_C1
Zn_ribbon_CSL
Msb1-Mug8_dom
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
117884211
NCBI-ProteinID:
XP_034640312
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All DBs
Position
10:complement(10763630..10778237)
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AA seq
837 aa
AA seq
DB search
MDRECSQLLPSVCAVLADSRQLVADDTFLEKFLDWFKTLTETESSLLLLQENPCLTELIT
CVLKLKDPSSSTLSFILRLTGIFAASESCFQYLQQRELLISLFGEVGPLSSALWEEASVR
SGWVQGVHSMVQHQSALHFLCSCGAIEVIFTLQGDPSLFVASAANQLVVHMLTFSLQSFQ
TKPVNIKDCDWPVCAQKVIVHIEKSLKSNSASRIKQSLKLLTSVFGCCHDLWTEVLWSRL
SEPIVYLLEEEPVHAGHSLVDLFLSMARSPVFSCPECSLWTSVTCALEHLNPAQVGRLAV
GVLKLQECPQAVKIQALSVLLQPMDCVLKAASQPLEYPGLLNRSVNDSATVETLLSCRSS
CASLLCQTLAHLEELQYLTCLPVDLPHIPLLQSVVTVLQFCIGLATPASCLGNKISRILI
GCFRVQRSALDILGALSHWESHSVFMGSVFDILLAYLKSPDTSPTVLKKSFQATLKWLVS
LSEAPSSKDHWQQTEQFLQDLFLVLQKRLCSPYWEVQDSALEFLTLLVKHLREKEGFRQV
LFSSEVPKLTEDLLEDPESYVRASAVTAMGQLSFLTHLISKKPGVENGNVKEKSIVAQLK
EILSTDSEGFPRRAVISVFIDWLREGHPDVLKDTEQFVSSVLQAVNSDLDWEVKAGGLEL
AEVFSAQILGRLGLAACPYAAVLSSATRSTHLSESLQIFCQVKLFEFLFGALCDCDRPVA
QKACDILIALKAELCDESSLKEGTSAGLSTEAHGIAWLEETLRRWSSCAKPCPRGDADEA
GSQDPNGVLLVLRTVDLEGLHRSLNRSSDHIEKSPQSLLQDILATVGTLEENEADCY
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggacagggaatgttctcagcttctgccttctgtttgtgcagttctagcagactcaagg
caacttgttgcagatgacacctttctagagaaatttctggactggtttaagactctgact
gaaacagaatctagcctgctgctgttacaggagaatccatgcttgacagagctcatcacg
tgcgtgctgaaactgaaggatccaagttctagcactctttcctttattctgagattaaca
gggatattcgcagcctctgaaagctgcttccagtatttacagcagagggagctgttgatc
agtctctttggagaggtggggcctctcagcagtgctctgtgggaagaggcatctgtgcga
agcggctgggtccagggtgtgcacagcatggtgcagcaccagagcgccctccattttttg
tgcagctgtggagccatagaggtgatcttcactctgcagggagaccccagcctgtttgtg
gcttcagctgccaatcagcttgtagtgcacatgctcaccttctctctacagtcattccag
actaaacctgtaaatataaaggactgtgattggccagtatgtgctcaaaaggttatagtg
cacattgaaaagtcccttaaatccaactctgcctctcgtatcaagcaatccttgaagctg
ctaactagtgtgtttggatgctgtcatgatctgtggactgaagtactttggtcacggcta
tcagagccaattgtatatctcttggaggaggagccagtccatgccgggcactcactggtg
gaccttttccttagcatggcaaggtctcctgtgtttagctgccctgaatgtagcctgtgg
acatcagtaacgtgtgctctggagcacttaaacccagctcaagttggtcgtttggcagtg
ggagtactgaagcttcaggaatgcccacaggcagtaaagatccaagctctgagtgttctg
cttcaaccaatggactgtgttctgaaagcagcctcccaacccttggaatatccaggtttg
ctgaataggtctgtgaatgattctgccactgttgaaactcttctgtcctgcagatcctct
tgtgctagcctcctctgtcagacgttggctcatctggaggagctgcagtacctgacctgc
ttgccagtggatttgccccatatacctttgctacagtctgtagtgacagtattgcaattc
tgtattggccttgcgactccagcatcctgtctgggaaacaagatcagtagaatcctgatt
ggttgcttcagagttcagcggtcagcacttgacatcctgggagcgctctctcactgggaa
agccacagtgtattcatgggaagtgtatttgacatcctccttgcatacctgaagagtcca
gataccagtcctactgttctgaagaagtcatttcaagcaacactcaaatggctggtgagt
ttgtcagaggcacccagctccaaggatcactggcaacagactgagcagtttctccaagat
ctgtttctggtgctgcagaagcgtttgtgcagtccttactgggaagtacaggactctgcc
ctggaatttctcaccctcctggttaagcatctgagagagaaggaggggttcaggcaagtt
ctcttctcttcggaggtgcccaagctcacagaggatcttcttgaggacccagagagttac
gtgagagcaagtgctgtgacagccatgggacagctgtccttcctcacccatctcatctca
aagaagcctggtgtagaaaatggaaatgtcaaagagaaaagcattgtagcacaacttaaa
gaaatcttatcaacagactcagagggcttccctagaagagctgtgatcagtgtcttcatt
gactggctgagagaaggccacccagatgtactgaaagacactgagcagtttgtctccagc
gtgctccaagctgtgaacagcgacttagactgggaagttaaagctggtggtttggaactg
gctgaagttttctctgcccagatacttggacggcttggccttgctgcatgcccatatgct
gctgtcttatcctctgccacccgctccactcatctgagtgagtctctgcagatattctgc
caggtgaaactgtttgagttcctgtttggtgctttgtgtgactgtgacaggccagtggct
cagaaagcctgcgatatcctcattgccttgaaagctgagctctgtgatgagagcagcctg
aaggaaggaacgagtgcaggcttgtctacagaagcgcatggtattgcttggttagaagag
actctgaggagatggagttcctgtgccaagccctgtcccagaggtgatgctgatgaggct
ggatcccaagacccaaacggtgtgctgctggttttgagaacagtggacttagaagggctg
cataggtctctgaacagaagtagtgaccacattgagaaaagccctcagtccctcttgcag
gacatcctggccactgtggggaccttggaggagaatgaagctgactgctattaa
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