Trachemys scripta elegans (red-eared slider): 117884238
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Entry
117884238 CDS
T07347
Symbol
ITGA11
Name
(RefSeq) integrin alpha-11 isoform X1
KO
K06587
integrin alpha 11
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04510
Focal adhesion
tst04512
ECM-receptor interaction
tst04810
Regulation of actin cytoskeleton
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117884238 (ITGA11)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117884238 (ITGA11)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117884238 (ITGA11)
04810 Regulation of actin cytoskeleton
117884238 (ITGA11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117884238 (ITGA11)
Cell adhesion molecules [BR:
tst04515
]
Integrins
Integrin alpha subunits
117884238 (ITGA11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
Integrin_A_Ig_3
FG-GAP_3
FG-GAP_2
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
117884238
NCBI-ProteinID:
XP_034640360
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Position
10:complement(81685336..81836567)
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AA seq
1191 aa
AA seq
DB search
MDFYRGLFVAWALSLLPGFCDTFNIDTKRPRIIPGSKEAYFGYTVQQHEIAGKKWLVVGA
PYETNGQLKTGDVYKCPVNGETNSNCTKLNLGRVTLSNVSERKDNMRLGLSLTTNPKDKS
FLACSPLWSHECGSSYYTTGMCSRVNSNFRFSKTIAPALQRCQTYMDIIIVLDGSNSIYP
WVEVQHFLINILKKFYIGPGQIQVGVVQYGEDVVHEFHLNDYRSVKDVVEAASHIEQRGG
TETRTAYGIEFARSEAFQKGGRKGAKKVMIVITDGESHDSPDLEKVIENSEKDNVTRYAV
AVLGYYNRRGINPAAFLKEIKFIASDPDDKHFFNVTDEAALKDIVDALGERIFSLEGTNK
NEISFGLEMSQTGFSSHIVEDGILLGAVGAYDWNGAVLKETSSGKVIPHRESYLQEFPEE
LKNHGAYLGYTVTSVMSPKHGRIYVAGAPRFNHTGKAIIFTMHSNRNLTIHQSLKGEQIG
SYYGSEINSIDINGDGMTDILLVGAPMYFSEGRERGKVYVYVLKEDRFVFNGALKDLQSY
QNSRFGSCIASVRDLNQDSYNDVVIGAPLEDDHQGAIYIFHGFKENLLKMYKQRIAAADL
LPGLMYFGCSIHGQLDLNEDGLIDLAIGSLGSAVLLWSRSVVQVNASIRFEPSKINIFNK
DCKRNGKDATCMSAFVCFTPVFLSTHFQMASVGLKYNATIDERRYTPRAHLDENSDRYTH
RLVTLSAGQEHCDKLNFHVLDTADYVKPVTFSVEYGLENPDYGPMMDDGWPTAFKVSVPF
WNGCNEDEHCVPDLVLDAKNDIPTATEYCRRVLRKSPSDCAAYTLSFDTSVFIIESTRRR
VAVEATLENKGENAYSTVLNISFSRNLQFASLIQKDDTDINIECMNEEKRPNKKVCNVSY
PFFRAKAKVAFRLDFEFSKSIFLQSMEIYLTANSDSEEQESTKEDNAALLNFHLKYEADL
LFTRSSSLDYYEIKSNSSLERYDSIGPPFNCTFKLHNLGFFPVDGVTIKITIPVATRGGN
RLLLLTDFIVDQENTTCNIWGNNTDYRRTPAEEDLSRNLQLNHSNSDVVSIDCNVKLASN
EEINFHLRGNLWLESLKALKFRSLKLTTNAALQRRFRSPFIFREEDPSRQITFEISKQEA
SQIPIWIILGSTLGGLLLLALLVLALWKLGFFKSASRKRDTEQEQNAKVLE
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggacttctacagagggctctttgtagcctgggctctcagcctcctaccaggattctgt
gacaccttcaatattgacaccaaaaggccccgaatcataccaggctctaaagaagcgtac
tttggctacacggtgcagcagcatgaaatcgctgggaagaaatggctggtggtgggagcc
ccctatgaaaccaatggacagctgaagactggagacgtctacaagtgtccggtgaatggc
gagactaacagcaactgcaccaaactcaacctaggaagagtaacactctccaatgtgtca
gagcgcaaagataacatgcgtcttggcctgagtctgaccacaaaccccaaggacaagagc
tttctggcttgcagccctctctggtcccatgagtgcggaagctcttactataccacggga
atgtgctccagggtgaactccaacttcagattctcgaagaccatagctcctgctctccag
agatgccaaacgtacatggacataatcatcgttctggatggatcgaacagcatatatccc
tgggttgaagtgcaacatttcctgataaacatcttgaaaaagttttacattgggcctggt
cagatacaggttggagttgttcagtatggagaagacgtcgtgcatgaatttcatttaaat
gactacaggtctgtaaaagatgtggtggaagctgctagtcacatagagcagagaggaggt
acagaaaccaggacggcatacgggatagaatttgctcgctcagaagcctttcagaaaggt
gggcgaaagggagcaaagaaagtgatgattgtcataaccgatggggaatcccatgacagc
ccagacctggagaaggtgattgaaaacagtgagaaggacaatgtcaccagatacgctgtg
gcagttctggggtattataatagaagaggaatcaacccagcagcatttttgaaagaaata
aaattcatagcaagtgatccagatgacaagcacttctttaatgtcacagatgaagcggca
cttaaggatattgtggatgcactgggagagaggatatttagtttggaaggtaccaacaaa
aacgaaatctcctttggacttgaaatgtcccagactggattttcatcacacattgtggaa
gatgggattttgcttggggccgtaggagcgtatgactggaatggagcagtgctcaaagaa
accagcagtggaaaagtcattcctcatagggaatcgtatctccaggaattcccagaggag
ctgaagaaccatggagcatacctaggttacaccgtcacctcagtgatgtctccaaagcat
ggaaggatttatgtagcgggagctcccaggttcaaccacactgggaaagcaattattttt
acaatgcacagcaacagaaacctaactattcaccagtctttgaaaggagaacagattggc
tcctactatggaagtgaaataaattccatcgacattaatggagacgggatgacagatatt
ttgttggtcggtgcccccatgtacttcagcgaaggcagagagagggggaaggtgtacgtc
tacgttctaaaagaggaccggtttgttttcaatggagctctgaaagatttgcagagctac
cagaattctagatttggttcttgcatcgcctctgtccgtgatctgaatcaagactcctac
aacgatgttgtcattggtgctcctttggaagatgaccaccaaggagcaatatatatcttc
catggcttcaaagaaaacctcctgaagatgtataagcagagaatagcagccgcagacctt
cttccaggcctgatgtattttggatgcagtatccatggacaactagatctaaatgaagat
ggcctcatagacctagcaattggctcccttggaagtgctgtgctcttatggtcccgcagt
gttgtccaggtcaatgccagcattcggtttgaaccatccaaaatcaacatctttaacaaa
gactgcaagcgaaatgggaaggatgccacctgcatgtctgcattcgtctgcttcactcca
gtcttcctctcgactcattttcagatggcaagtgtgggattaaaatacaatgcaaccatt
gacgagcgaaggtacacgccacgggctcatctggatgaaaatagcgaccggtacactcat
aggctggtcacattgtctgcaggacaagaacactgcgacaagctaaattttcacgtcttg
gacacagcagactatgtgaagcctgtgacattttccgtcgaatatggtctggagaaccct
gactatggtcccatgatggatgatggctggccaactgcatttaaagtctctgtgcctttc
tggaatggatgcaatgaggatgaacactgtgtccctgatctggtccttgatgctaaaaac
gatattccaactgccacggagtattgcagaagagtactgagaaagtcaccgtcggattgc
gccgcctacacactatcttttgatacctccgtttttatcatagagagcacgaggaggagg
gtggctgtagaagctacactggagaacaaaggcgaaaatgcatacagcactgtcctaaac
atttccttctcgagaaatctgcagtttgctagcttgattcagaaggatgatacagacatc
aatattgaatgcatgaatgaagaaaagcgccccaacaagaaggtgtgcaatgttagctac
cccttcttccgagccaaagcaaaggtggcttttcgcctggatttcgaattcagcaaatct
atttttcttcaaagcatggagatctatctaactgccaacagtgacagcgaagaacaggaa
agtacgaaagaagataatgctgctctcctgaattttcacctgaaatacgaagccgacctc
cttttcaccaggagttcgagtctggactattatgaaatcaagtcaaacagctccctggag
aggtacgacagcatcggccctccctttaattgcacatttaagctgcacaatctggggttc
tttcctgtcgacggcgtgactatcaaaatcacaatcccagtagccacaagaggagggaat
cgccttctgctgctgactgatttcattgtggatcaggaaaacacgacgtgtaatatctgg
ggaaacaacactgattacagaaggacacccgctgaggaggacctttcccgtaacctacaa
ctgaaccacagtaactcggatgtcgtgtccattgactgtaatgtgaaattagcatccaat
gaagaaatcaactttcacttacgtggcaatctgtggctggagtcactgaaagcactgaag
ttcaggtcactgaagctcacgacgaatgcagctctgcagcgacggtttcgcagccccttc
atctttcgggaagaggaccccagtcgccagataacgtttgaaatctccaagcaagaggca
tcccagatcccgatctggatcattctaggcagcacgctaggagggctcctgctgctcgcg
ctccttgtcctggctctatggaagcttggattttttaaaagtgccagtcgcaagagagat
acagaacaggagcagaatgccaaagtattagaatga
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integrated database retrieval system
