Trachemys scripta elegans (red-eared slider): 117884292
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Entry
117884292 CDS
T07347
Symbol
SV2B
Name
(RefSeq) synaptic vesicle glycoprotein 2B
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117884292 (SV2B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117884292 (SV2B)
Transporters [BR:
tst02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
117884292 (SV2B)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
MFS_1_like
Pentapeptide_4
Pentapeptide_3
MFS_2
Interferon
Motif
Other DBs
NCBI-GeneID:
117884292
NCBI-ProteinID:
XP_034640468
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All DBs
Position
10:73101521..73206428
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AA seq
704 aa
AA seq
DB search
MDDRYRNNANLYQGAKDIAREVNQVSDDYRYQDGNYAPSDGYYHDGTQEEDAQSDATEGH
DEEDEVYEGEYQGIPHPDDIKGKQKKKAPAMADEFRDKAELIAERMEDEEQLAHQYENII
EECGHGRFQWMLFFVLGLALMADGVEVFVVGFVLPSAEKDMCLSSSNKGMLGLIVYLGMM
VGAVIWGGLADKLGRKKCLIISLAINAAFAFLSSFVQGYGFFLFCRLISGLGIGGSLPIV
FAYFSEFLSREKRGEHLSWLCMFWMIGGIYASAMAWSIIPHYGWGFSMGTKYHFHSWRVF
VIICVLPCISSLVALKFMPESPRFLLEIGKHDEAWMILKQVHDTNMRAKGEPERVFTVAH
IKTPKQIDEFIEIQSSTGAWYQRWLVRFTTTLKQIWDNLLYCLTAQYKMNTLILAMVWFS
MAFSYYGLTVWFPDMIRYLQNEEYDSRLKTFSREHVTHFTINFTLENQIHRNGVFVNIKF
AKMKFKDVTFEDMLFEECYFEDVTSTETVFKNCTILATVFYNTDLYEDKFIECRFINVTF
LDQKEGCHLDFEQENDFLIYLVSFLGSLSVLPGNIISALLMDKIGRIKMIGGSMLISAVC
CFFLFFGNSESAMIGLQCLFCGASIAAWNALDVITVELYPTSKRSTAFGILNGLCKFGAI
LGNSIFASFVGITKVVPILLASSVLVAGGLLALRLPETREQVLM
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcggtatagaaacaacgcaaatctgtatcaaggggctaaggacatagctaga
gaggtgaaccaggtgtcagatgactaccggtatcaggatggcaactatgcaccttcagat
ggctattaccatgatgggacccaagaagaggatgcccagagcgatgccacggaaggccat
gatgaggaagatgaggtctatgaaggagagtaccagggcatccctcacccagatgacatt
aagggcaaacagaagaagaaagcccctgccatggccgatgagtttagagacaaggctgag
ctcatagccgagcggatggaggatgaggaacagcttgcccaccagtatgaaaacatcatc
gaggagtgtggccatgggcgcttccagtggatgctcttctttgttttaggcttggcactg
atggcggatggggtggaggtgtttgtggttggctttgttctgcccagtgctgagaaggat
atgtgcttgtccagctcaaacaaagggatgctagggctgatagtctacctgggaatgatg
gtgggagctgtcatttggggtggcctggcagataaactgggaaggaagaaatgcctcatc
atatcactcgcaatcaacgctgcctttgcattcctctcctccttcgtccagggatatgga
ttcttccttttctgccgccttatctccggcctcggcatcgggggatccctccccatcgtc
tttgcttatttctctgaattcctatctcgtgagaagaggggggaacacctgagctggctc
tgcatgttctggatgatcggtggcatttatgcctctgcaatggcttggagcatcattccc
cactatggctggggtttcagcatgggaaccaagtatcacttccacagctggagggtattt
gtaatcatctgtgttctgccctgtatctcttcattggtggcacttaaattcatgccggaa
agtccacgttttttgctagagataggtaaacatgatgaagcctggatgattctcaagcaa
gttcatgataccaacatgcgggccaagggggagccggagagggtgtttacggtcgcccac
atcaaaactccaaagcaaatagatgagtttattgaaatccagagctcaacaggggcatgg
taccagcgctggttggtcagattcacgaccacattaaaacagatctgggacaacctgttg
tattgcttgacagcccagtacaagatgaatacactgattctggctatggtttggttttca
atggcctttagttactatggccttactgtctggttccctgacatgatccgatatctccag
aatgaggagtatgactcccgactcaaaaccttcagtcgggaacatgtaacgcacttcacc
ataaacttcacactggaaaaccagatccataggaatggggtatttgtcaatattaagttt
gctaagatgaaattcaaagatgtgacttttgaggacatgctgtttgaggaatgctatttt
gaagatgtgacatccaccgagaccgtcttcaaaaactgcaccattttagccactgtcttc
tataacactgatctttatgaagacaaattcatcgagtgtaggtttataaacgtcaccttc
ctggaccagaaggagggatgtcacctggacttcgagcaggaaaatgacttcctaatttat
ctcgtcagtttcctgggtagtttgtccgtgttgcctggcaacatcatctcagcactgctc
atggacaaaataggaaggataaagatgattggtggctcaatgctgatttctgcagtgtgc
tgcttctttctgttctttggcaatagtgagtctgcgatgattggcttgcagtgtctgttc
tgcggggccagcattgctgcctggaatgccctggacgtgatcaccgtggagctctatccc
accagtaaacgatcaacagcctttggcatcctcaacggtctctgcaagtttggtgccatc
ctggggaactctatctttgcttcctttgtcgggataaccaaagtagttcccatccttctg
gcctcctctgtgctggttgcgggaggcctgctagccctgaggctaccagagactcgagaa
caggtcctgatgtga
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