Trachemys scripta elegans (red-eared slider): 117884325
Help
Entry
117884325 CDS
T07347
Symbol
SEPTIN12
Name
(RefSeq) septin-12 isoform X1
KO
K16938
septin 3/9/12
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117884325 (SEPTIN12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117884325 (SEPTIN12)
04812 Cytoskeleton proteins [BR:
tst04812
]
117884325 (SEPTIN12)
04147 Exosome [BR:
tst04147
]
117884325 (SEPTIN12)
Cilium and associated proteins [BR:
tst03037
]
Motile cilia and associated proteins
Sperm associated proteins
117884325 (SEPTIN12)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
117884325 (SEPTIN12)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117884325 (SEPTIN12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
RsgA_GTPase
AIG1
FtsK_SpoIIIE
AAA_16
Dynamin_N
Ras
AAA_22
Roc
ABC_tran
AAA_29
Motif
Other DBs
NCBI-GeneID:
117884325
NCBI-ProteinID:
XP_034640532
LinkDB
All DBs
Position
10:30177979..30390499
Genome browser
AA seq
828 aa
AA seq
DB search
MSQLSVNDHLEGILSDFEALKRSFDMEDAEEAPAVLPSCPFGPSMPADSLVAGNGESGRL
ASLMPPTHQSRISLSSSPSPAQSPVLKTRISTSFSFNRGTIQLARANGAVSSSLTRVTSF
QARLDPNGFSSSLGLGSESLHSSSSSLECPLPPSTPQSAARQLEPRGLKAAPVASPALKK
FSSHSNVFHSEAEQPIQLVSKAGVNHGSLPSLDLHIAEDQGSPIPLAPALAFHSAGAWSS
SSQNCALLRGKSSTPISREPSFSSSSSSSSSSPLSDAAQRPSLSPPPPPFRQPTKLQKFP
LSLDGLVGKPLDGSDPAPSADSASRPLPRTQLQLSLSTSPSLSRQPPGRAKEGAAAASVS
GVSAAPSPGKCPGAQVNESPWPPSRSPAQAAPFRLMSRPQIMQVTSQPSFLGGPAACPRE
HVRSMAERVNSFSSSEVSGLGAPAPSSYPREVPYVGPAGSPRVSSVSEEMQGREKTKEGS
SPEPGCISMEGQPVQPAPEETPRNTNPANVGLELFGYVGIEAVLDQMRIKTMKTGFEFNL
MVVGQSGLGKSTMVNTLFKSKVSRKPTGPGYEEHIPKTVQLQSVTHVIEEKGVKMKLTVT
DTPGFGDQINNENCWDPIIKYINEQYEKYLREEILISRKRKIPDTRVHSCVYFVPPTGHW
LRPLDLEFMRRLSKIVNVVPVIAKADTLTLEERAEFKQRIQKDLKAHGISVYPQEDFDDN
PDDRILNDKIRDKIPFAVVGADKEHQVNGKRVLGRKTKWGIIEVENPAHCEFPLLRDLLI
RSHLQDLKDITHNVHYESYRVQRLNESNRLVLSPVNGLLGKDEVESDL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgtccgtcaacgatcacctggaggggatcctctccgacttcgaagcactg
aagaggtcgttcgatatggaggatgctgaagaggctccagctgttctgccttcctgcccg
ttcggccccagcatgcctgcagacagcctagtcgcgggcaatggggaaagtggccggctg
gccagcctcatgccacccacccatcaatcccgcatcagcctcagctcgagccccagccca
gcccagagccctgtgctgaagaccaggattagcaccagcttctccttcaacagaggcacc
atccagctggccagggccaacggcgccgtgagctccagcctgacccgcgtcacctctttc
caagccaggcttgatcccaatggcttctcctcctccttaggcctgggcagcgagagcctc
cacagctcctcctccagcttggagtgcccactgccccccagcacaccccagagtgctgcc
aggcagctggagcctcgggggctcaaggccgccccggttgccagcccggcactgaagaaa
ttctcttcccacagtaatgtcttccattctgaggcggaacagcccatccagctggtgtcc
aaggccggagtgaaccatggctcactgccctctctggacctgcacattgccgaagatcag
ggctcccccatcccactcgcccctgccctggcttttcactctgctggagcctggagcagc
agcagccagaactgcgccttgctccgagggaagagcagcacacccatcagcagggagcct
tccttctcctcctcttcctcctcttcctcttcctccccactctccgatgcagcccagcgg
cccagtctgagcccccctcctccacccttcaggcagccgacaaagctgcagaaattcccc
ctcagcctggatggtttggtggggaagcctctggatggctcggatccagcgccgagtgct
gactctgcgtccagaccgctgccaaggacgcagctccagctcagcctcagcaccagcccc
agcctgtcccggcagcccccgggtagggccaaggagggtgcagccgcagcctctgtgagt
ggtgtctccgcagcgccgtctccggggaagtgcccaggtgcccaggtcaatgagagccct
tggccaccatctcggtctcctgctcaagctgctcccttcaggctcatgtctcggcctcag
ataatgcaagtgacttctcaaccctccttccttgggggcccagcagcatgtccaagggaa
catgtccgatccatggctgaaagagtcaactccttctccagctctgaggtctcaggcctt
ggggctcctgctcccagttcctacccaagggaagtcccctacgtgggcccggcaggttct
ccaagggtctcttctgtgagcgaggagatgcagggccgagagaagacaaaggaagggagt
agcccggagccagggtgtatcagtatggaggggcagccagtccagccagcgcccgaggag
acgccccgcaacactaacccagccaacgtggggctggagctctttggctacgtgggcatc
gaggcggtgctggatcagatgaggatcaagaccatgaaaacaggctttgaattcaacctc
atggttgtagggcagagtggcctgggaaagtcgacaatggtgaacactctcttcaagtcg
aaggtgagccggaaacccacaggccccggctacgaggagcacatcccaaagacggtgcag
ctgcagtccgtcacccacgttatcgaagagaagggcgtgaagatgaagctgactgtgaca
gacacgccagggttcggcgaccagatcaacaatgaaaactgctgggaccccatcatcaag
tacatcaacgagcagtatgagaagtacctgagagaggagatcctcatcagccgcaaacgg
aagatcccagacaccagagtccacagctgtgtgtacttcgtgccacccactggccactgg
ctgcgtcccttggatctggagttcatgaggcggctgagtaagatcgtcaatgtggtgcca
gtgatcgccaaggcagacaccctgaccctggaggaacgggccgagttcaagcagaggatc
cagaaggacttgaaggcccacggcatcagcgtctatccccaggaggattttgatgacaac
ccagacgacaggatattgaatgataaaattcgagacaaaatcccctttgcggtggtggga
gcggacaaggagcatcaggtgaacgggaagagggtcttgggccgcaagaccaagtggggg
atcattgaagtggagaacccagcgcactgcgaattccccctgctccgagacctgctcatc
cggtcccacctgcaggatctcaaggacatcacccacaacgtgcattacgagagctaccgc
gtgcagcggctcaacgagagcaaccggctggtgctgagccctgtcaatgggctgctgggg
aaggacgaggtggagagcgacctctga
DBGET
integrated database retrieval system
