Trachemys scripta elegans (red-eared slider): 117884330
Help
Entry
117884330 CDS
T07347
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117884330 (HCN4)
Ion channels [BR:
tst04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
117884330 (HCN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
117884330
NCBI-ProteinID:
XP_034640540
LinkDB
All DBs
Position
10:41742441..41954272
Genome browser
AA seq
1184 aa
AA seq
DB search
MDKLPPAMRKRLYSLPQPGGSKASIMDEEGDGDKDTRRRSIRLKPLPAAGGTRGDAGQEP
GAKSSTNGDCRRFRGSLSSLGSRHPHDAAEGTRLIGGEGEAASPGEERSPPGGGEPEPPP
APGPSPPPEPHALPASASIKLEGGAGGDQITPDEELQLGQAGFMQRQFGAMLQPGVNKFS
LRMFGSQKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDE
NTTPWIVFNVVSDTFFLIDLVLNFRTGIVIEDNTEIILDPQRIKMKYLKSWFVVDFISSI
PVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYD
LASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPEDCWVSLNRMVNDSWGKQYSYALF
KAMSHMLCIGYGQQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEK
YKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKLV
ASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKET
KLADGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDR
LDRIGKKNSILLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHNVQAAAAAAAAAA
STPTPVIWTPLIQAPLQAAAATTSVAIALTHHPRLPTAIFRPPVSVLGSLGQPSSQTPRQ
LKRLQSIIPSAGPSAVGSPSSTPSQLHTPGAETPSSSSFQIQQLAGFTASAGLGLFHQAS
VGSPSPGSSQQCLGGTSSSGLNQFQQAPSGSPLGTAQQQPLSSNTPPSGFGHFQQATTSS
PSTSFTQLSSNSPSNLLNQFQPTTPRPPQVGQLQPLTGSGTLGGMNHFQPPPSSSSPSSS
LSQLAQTSGGSLSALCQIQPSALGSATGMIGHQERSPFASMSPLQQPGVASPCYTPSGLS
PPSQSPVAARTFQCGPARASGSHGSLLMPQTSSLPPLVLQPKSSPHLPPRRLSQDIKLIS
ASQPSLPQELSQTLSQSSPLSSRESVLSFFPFSGGGSGLLGKPCSSIPGRMTLPRQMSSG
SLPHPLVFGASAVIAPSLTASGRKESVVLPGELEPVRSNLPSNL
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgcccccagccatgcgcaagcggctctacagcctgccccagcccggtggg
tccaaggcgtcgatcatggacgaggagggagacggcgacaaggacacccgcaggcgaagc
atccgcctcaagccgttgcccgcggcggggggcacccggggagacgccggccaggagccg
ggcgccaagagcagcaccaacggggactgccggcgcttccgcggcagcctgtcctcgctg
ggcagccggcacccgcacgacgcggccgagggcacgcgtctcattgggggcgagggggag
gcggcctcccccggcgaggagcggagccccccgggtggcggggagcccgagcccccgccg
gcccccggcccgtccccccccccggagccgcatgccctgcccgcctccgcctccatcaaa
ctggaaggcggggcggggggcgaccagatcaccccggacgaggagctgcagctgggccag
gccggcttcatgcagcgccagttcggggccatgctccagccgggggtcaacaagttctcg
ctgaggatgttcggcagccagaaggcggtggagcgggagcaggagcgggtcaagtccgca
gggttctggatcatccacccctacagcgacttcaggttctactgggatctgactatgctg
ctcctgatggtgggaaacctgatcattatccctgtgggcatcactttcttcaaggacgag
aataccaccccatggatcgttttcaatgtggtctcagacaccttcttcctcatcgatctg
gtcctcaacttccggaccggcatcgtgatagaggataacaccgagatcatccttgacccc
caacgaattaagatgaagtacctgaagagctggttcgtggtggattttatctcctccatc
cccgtggactacatcttcctgatcgtggagacccgtatcgactcagaggtttacaagact
gcccgggctctgcgcattgtgcgcttcaccaaaatcctcagcctcttgcgcctgctgagg
ctctcaaggctcatccgctacatccaccaatgggaagagatattccacatgacctatgac
ctggcgagtgcggtggtgcggattgtgaacctgattggaatgatgctgctgctgtgtcat
tgggatggctgccttcagttcctggtgcccatgctccaggacttccctgaagactgctgg
gtgtccctcaatcgcatggtgaatgactcctgggggaagcagtattcctatgcactgttc
aaggcgatgagtcacatgctctgcattggctatgggcagcaggctcccgttggcatgtca
gatgtgtggctcactatgctgagcatgatcgttggtgccacctgctatgccatgttcatc
ggccatgccacagccctcatccagtctctggactcctcacggcggcagtaccaggagaag
tacaaacaagtggagcagtacatgtccttccacaagctccccgccgacatgcgccagcgg
atccatgactactacgagcaccgctaccagggcaagatgtttgacgaggagagcatcctg
ggagaactgagcgagcccctgcgcgaggaaatcataaacttcaactgccggaagctggtg
gcatccatgccgctgtttgccaatgccgatcccaactttgtgacgtccatgctgaccaaa
ctgcggtttgaggtattccagccgggggattacatcatccgggagggcaccattggcaag
aaaatgtacttcatccagcacggggtggtgagcgtgctcaccaaaggcaacaaggagact
aaactggcagatggctcctactttggagaaatctgcctgttgacccgtggccggcgcaca
gcaagcgtgcgagctgacacctactgccgcctctactccctctcggtggacaacttcaac
gaggtattggaagagtatcccatgatgagaagggcttttgaaacggtggcactggacagg
ctggatagaattggtaagaaaaattccatcctgctgcataaagtccagcacgacctcaac
tctggtgtcttcaactaccaggagaatgagatcatccagcagattgtgcagcatgacaga
gagatggcgcactgtgctcacaatgttcaggccgcggccgccgcagctgcagctgcagct
tccacaccaacccccgtcatctggactccactgatccaagcgcccttgcaagctgcagca
gccaccacttcagtagcaatagctctgacccaccacccacgcctcccgacggctatattc
cgtcctccagtgtctgtcttgggttccttggggcagccgtccagccagacaccaagacaa
ctgaaaaggcttcagtctattataccatcagcaggtccttctgccgtaggctctccatcc
agcacgccatcccagctgcacactccaggagctgaaaccccttcatcatcttccttccaa
atccagcagctggcaggattcacggcctctgctggcttaggcctgttccatcaggcctcg
gttggatctccttcccctggctcaagccagcagtgcttgggtggcacatcatcatcagga
ttaaaccagtttcaacaggcaccttcagggtctcctttagggacagctcagcagcagcca
ctttccagcaacactccacctagtgggtttggccactttcagcaggccaccactagctct
ccatctacttccttcacccagctctcatcaaactcacctagcaatcttctcaaccaattc
cagcccaccacccccaggccaccgcaggtgggacagttacagccactcacgggaagtgga
actttgggaggaatgaaccactttcaacctcctccttcttccagttctccatcctctagc
ttaagtcagttggcacaaacctctggaggctccctttcagcgctgtgccaaatccaacca
agtgcattaggttctgcaactgggatgataggccaccaggaaaggtcaccttttgcctcc
atgtctccactgcagcagcctggtgtagcctccccttgttacaccccttctggccttagt
cctcccagtcagagcccagtggccgcaagaactttccagtgtggccctgccagggcctcc
ggctctcatggatctttgctcatgcctcagacctccagcctgcctccactggtccttcaa
cccaagagctctccacatttgccaccaagacgcctgagccaggacatcaagttgatttct
gcttcccagccatctttgccccaagaattgtctcagactctgagccaaagctctcctctt
tcctctagagagtctgttctgagcttctttcctttctctgggggagggtctggacttctc
gggaagccgtgtagctctattcctgggcgcatgactttgccgcgtcagatgtcctcaggt
tctctgccacacccactagtgtttggagccagtgctgtcattgctccctccctgactgct
agtgggaggaaagaatctgttgtgctccctggggagctagaacctgtcagatccaatctt
ccctccaatttgtga
DBGET
integrated database retrieval system
